RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 PAK3O75914 559 aaPredicted RBP17.42■□□□□ 0.38
SYNE2-214ENST00000554928 POTEAQ6S8J7 498 aa17.42■□□□□ 0.38
SYNE2-214ENST00000554928 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
SYNE2-214ENST00000554928 ALS2Q96Q42 1657 aa17.41■□□□□ 0.38
SYNE2-214ENST00000554928 ATAD2Q6PL18 1390 aa17.4■□□□□ 0.38
SYNE2-214ENST00000554928 C8orf37Q96NL8 207 aa17.4■□□□□ 0.38
SYNE2-214ENST00000554928 SLC12A5Q9H2X9 1139 aa17.39■□□□□ 0.37
SYNE2-214ENST00000554928 AFF2P51816 1311 aa17.39■□□□□ 0.37
SYNE2-214ENST00000554928 ARHGEF10O15013 1369 aa17.39■□□□□ 0.37
SYNE2-214ENST00000554928 USP6P35125 1406 aa17.38■□□□□ 0.37
SYNE2-214ENST00000554928 CD163L1Q9NR16 1453 aa17.38■□□□□ 0.37
SYNE2-214ENST00000554928 HSPA5P11021 654 aaKnown RBP17.38■□□□□ 0.37
SYNE2-214ENST00000554928 SSH2Q76I76 1423 aa17.38■□□□□ 0.37
SYNE2-214ENST00000554928 TMC1Q8TDI8 760 aa17.37■□□□□ 0.37
SYNE2-214ENST00000554928 CPSF1Q10570 1443 aaKnown RBP17.37■□□□□ 0.37
SYNE2-214ENST00000554928 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
SYNE2-214ENST00000554928 ABCA3Q99758 1704 aa17.35■□□□□ 0.37
SYNE2-214ENST00000554928 TMF1P82094 1093 aa17.34■□□□□ 0.37
SYNE2-214ENST00000554928 NGLY1Q96IV0 654 aa17.34■□□□□ 0.37
SYNE2-214ENST00000554928 CRYBG1Q9Y4K1 1723 aa17.33■□□□□ 0.37
SYNE2-214ENST00000554928 TTC21BQ7Z4L5 1316 aa17.33■□□□□ 0.36
SYNE2-214ENST00000554928 EIF4G2P78344 907 aaKnown RBP eCLIP17.33■□□□□ 0.36
SYNE2-214ENST00000554928 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.36
SYNE2-214ENST00000554928 ABTB2Q8N961 1025 aa17.33■□□□□ 0.36
SYNE2-214ENST00000554928 PUS7Q96PZ0 661 aaKnown RBP17.33■□□□□ 0.36
SYNE2-214ENST00000554928 A0A1W2PP64 1363 aa17.32■□□□□ 0.36
SYNE2-214ENST00000554928 KTN1Q86UP2 1357 aaKnown RBP17.32■□□□□ 0.36
SYNE2-214ENST00000554928 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
SYNE2-214ENST00000554928 ZRANB1Q9UGI0 708 aa17.32■□□□□ 0.36
SYNE2-214ENST00000554928 AKAP12Q02952 1782 aa17.32■□□□□ 0.36
SYNE2-214ENST00000554928 FNBP4Q8N3X1 1017 aaPredicted RBP17.31■□□□□ 0.36
SYNE2-214ENST00000554928 NRKQ7Z2Y5 1582 aa17.31■□□□□ 0.36
SYNE2-214ENST00000554928 PIK3C2AO00443 1686 aa17.3■□□□□ 0.36
SYNE2-214ENST00000554928 USP19O94966 1318 aa17.3■□□□□ 0.36
SYNE2-214ENST00000554928 FAM83GA6ND36 823 aa17.3■□□□□ 0.36
SYNE2-214ENST00000554928 C11orf95C9JLR9 678 aaPredicted RBP17.3■□□□□ 0.36
SYNE2-214ENST00000554928 ZNF692Q9BU19 519 aaPredicted RBP17.3■□□□□ 0.36
SYNE2-214ENST00000554928 BCL9LQ86UU0 1499 aa17.3■□□□□ 0.36
SYNE2-214ENST00000554928 ZNF772Q68DY9 489 aaPredicted RBP17.29■□□□□ 0.36
SYNE2-214ENST00000554928 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.29■□□□□ 0.36
SYNE2-214ENST00000554928 USP21Q9UK80 565 aa17.29■□□□□ 0.36
SYNE2-214ENST00000554928 MARF1Q9Y4F3 1742 aaKnown RBP17.29■□□□□ 0.36
SYNE2-214ENST00000554928 PHRF1Q9P1Y6 1649 aaKnown RBP17.29■□□□□ 0.36
SYNE2-214ENST00000554928 SLIT2O94813 1529 aa17.28■□□□□ 0.36
SYNE2-214ENST00000554928 MON2Q7Z3U7 1717 aa17.28■□□□□ 0.36
SYNE2-214ENST00000554928 NME9Q86XW9 330 aa17.28■□□□□ 0.36
SYNE2-214ENST00000554928 BRD4O60885 1362 aaPredicted RBP17.28■□□□□ 0.36
SYNE2-214ENST00000554928 NLRP6P59044 892 aa17.27■□□□□ 0.36
SYNE2-214ENST00000554928 ZC3H6P61129 1189 aaKnown RBP17.27■□□□□ 0.36
SYNE2-214ENST00000554928 HDGFL2Q7Z4V5 671 aaPredicted RBP17.27■□□□□ 0.36
SYNE2-214ENST00000554928 KIAA0232Q92628 1395 aa17.27■□□□□ 0.35
SYNE2-214ENST00000554928 SLC24A1O60721 1099 aa17.26■□□□□ 0.35
SYNE2-214ENST00000554928 CHRNA2Q15822 529 aa17.26■□□□□ 0.35
SYNE2-214ENST00000554928 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
SYNE2-214ENST00000554928 QTRT2Q9H974 415 aaKnown RBP17.26■□□□□ 0.35
SYNE2-214ENST00000554928 ATRNO75882 1429 aa17.25■□□□□ 0.35
SYNE2-214ENST00000554928 NLRP13Q86W25 1043 aa17.25■□□□□ 0.35
SYNE2-214ENST00000554928 TERF2IPQ9NYB0 399 aa17.25■□□□□ 0.35
SYNE2-214ENST00000554928 MYOM1P52179 1685 aa17.25■□□□□ 0.35
SYNE2-214ENST00000554928 TTC21AQ8NDW8 1320 aa17.24■□□□□ 0.35
SYNE2-214ENST00000554928 EDC4Q6P2E9 1401 aaKnown RBP17.24■□□□□ 0.35
SYNE2-214ENST00000554928 GCP02774 474 aa17.24■□□□□ 0.35
SYNE2-214ENST00000554928 SLIT3O75094 1523 aa17.24■□□□□ 0.35
SYNE2-214ENST00000554928 ANKRD36BQ8N2N9 1353 aa17.24■□□□□ 0.35
SYNE2-214ENST00000554928 NINLQ9Y2I6 1382 aa17.24■□□□□ 0.35
SYNE2-214ENST00000554928 SOX12O15370 315 aa17.23■□□□□ 0.35
SYNE2-214ENST00000554928 UNC5CLQ8IV45 518 aa17.23■□□□□ 0.35
SYNE2-214ENST00000554928 PRDM11Q9NQV5 511 aa17.23■□□□□ 0.35
SYNE2-214ENST00000554928 PLCH1Q4KWH8 1693 aa17.23■□□□□ 0.35
SYNE2-214ENST00000554928 CDCA8Q53HL2 280 aa17.22■□□□□ 0.35
SYNE2-214ENST00000554928 CARD14Q9BXL6 1004 aa17.22■□□□□ 0.35
SYNE2-214ENST00000554928 BTG4Q9NY30 223 aa17.22■□□□□ 0.35
SYNE2-214ENST00000554928 USP31Q70CQ4 1352 aa17.21■□□□□ 0.35
SYNE2-214ENST00000554928 RXRBP28702 533 aa17.21■□□□□ 0.35
SYNE2-214ENST00000554928 TRPC5Q9UL62 973 aaPredicted RBP17.21■□□□□ 0.35
SYNE2-214ENST00000554928 ZBTB7CA1YPR0 619 aa17.2■□□□□ 0.34
SYNE2-214ENST00000554928 COL14A1Q05707 1796 aaKnown RBP17.2■□□□□ 0.34
SYNE2-214ENST00000554928 NRAPQ86VF7 1730 aa17.19■□□□□ 0.34
SYNE2-214ENST00000554928 CPDO75976 1380 aa17.19■□□□□ 0.34
SYNE2-214ENST00000554928 RBM6P78332 1123 aaKnown RBP17.19■□□□□ 0.34
SYNE2-214ENST00000554928 NFAT5O94916 1531 aa17.18■□□□□ 0.34
SYNE2-214ENST00000554928 OVOS2A0A0J9YW53 1432 aa17.18■□□□□ 0.34
SYNE2-214ENST00000554928 RGS12O14924 1447 aa17.18■□□□□ 0.34
SYNE2-214ENST00000554928 OVOS2Q6IE36 1432 aa17.18■□□□□ 0.34
SYNE2-214ENST00000554928 GLI3P10071 1580 aa17.18■□□□□ 0.34
SYNE2-214ENST00000554928 KIF7Q2M1P5 1343 aa17.18■□□□□ 0.34
SYNE2-214ENST00000554928 CAMTA1Q9Y6Y1 1673 aa17.17■□□□□ 0.34
SYNE2-214ENST00000554928 FBLN1P23142 703 aa17.17■□□□□ 0.34
SYNE2-214ENST00000554928 GJD4Q96KN9 370 aaPredicted RBP17.17■□□□□ 0.34
SYNE2-214ENST00000554928 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.17■□□□□ 0.34
SYNE2-214ENST00000554928 NWD2Q9ULI1 1742 aa17.16■□□□□ 0.34
SYNE2-214ENST00000554928 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
SYNE2-214ENST00000554928 VPS72Q15906 364 aa17.16■□□□□ 0.34
SYNE2-214ENST00000554928 GGNBP2Q9H3C7 697 aa17.16■□□□□ 0.34
SYNE2-214ENST00000554928 LMO7Q8WWI1 1683 aa17.16■□□□□ 0.34
SYNE2-214ENST00000554928 FYB1O15117 783 aa17.15■□□□□ 0.34
SYNE2-214ENST00000554928 ARHGEF25Q86VW2 580 aa17.15■□□□□ 0.34
SYNE2-214ENST00000554928 STRN4Q9NRL3 753 aa17.15■□□□□ 0.34
SYNE2-214ENST00000554928 AXIN2Q9Y2T1 843 aa17.15■□□□□ 0.34
SYNE2-214ENST00000554928 USP54Q70EL1 1684 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms