RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 EDC4Q6P2E9 1401 aaKnown RBP11.15□□□□□ -0.62
LINC01397-201ENST00000554808 SBNO1A3KN83 1393 aa11.15□□□□□ -0.63
LINC01397-201ENST00000554808 JCADQ9P266 1359 aa11.15□□□□□ -0.63
LINC01397-201ENST00000554808 SOS2Q07890 1332 aaPredicted RBP11.14□□□□□ -0.63
LINC01397-201ENST00000554808 KIF7Q2M1P5 1343 aa11.14□□□□□ -0.63
LINC01397-201ENST00000554808 CD163L1Q9NR16 1453 aa11.14□□□□□ -0.63
LINC01397-201ENST00000554808 CABP1Q9NZU7 370 aa11.14□□□□□ -0.63
LINC01397-201ENST00000554808 TNS3Q68CZ2 1445 aa11.14□□□□□ -0.63
LINC01397-201ENST00000554808 MAP2P11137 1827 aaKnown RBP11.14□□□□□ -0.63
LINC01397-201ENST00000554808 LTN1O94822 1766 aa11.13□□□□□ -0.63
LINC01397-201ENST00000554808 ACEP12821 1306 aa11.13□□□□□ -0.63
LINC01397-201ENST00000554808 TMC1Q8TDI8 760 aa11.13□□□□□ -0.63
LINC01397-201ENST00000554808 A0A1W2PP64 1363 aa11.13□□□□□ -0.63
LINC01397-201ENST00000554808 ARHGEF10O15013 1369 aa11.13□□□□□ -0.63
LINC01397-201ENST00000554808 KTN1Q86UP2 1357 aaKnown RBP11.13□□□□□ -0.63
LINC01397-201ENST00000554808 TTC21AQ8NDW8 1320 aa11.12□□□□□ -0.63
LINC01397-201ENST00000554808 PMFBP1Q8TBY8 1022 aa11.12□□□□□ -0.63
LINC01397-201ENST00000554808 LRRC59Q96AG4 307 aaKnown RBP11.12□□□□□ -0.63
LINC01397-201ENST00000554808 WASHC2AQ641Q2 1341 aa11.11□□□□□ -0.63
LINC01397-201ENST00000554808 FOXO3O43524 673 aa11.11□□□□□ -0.63
LINC01397-201ENST00000554808 SSH2Q76I76 1423 aa11.1□□□□□ -0.63
LINC01397-201ENST00000554808 ZNF316A6NFI3 1004 aaPredicted RBP11.1□□□□□ -0.63
LINC01397-201ENST00000554808 KRT28Q7Z3Y7 464 aa11.1□□□□□ -0.63
LINC01397-201ENST00000554808 POLR3GLQ9BT43 218 aa11.1□□□□□ -0.63
LINC01397-201ENST00000554808 SLC12A5Q9H2X9 1139 aa11.1□□□□□ -0.63
LINC01397-201ENST00000554808 NSD2O96028 1365 aa11.09□□□□□ -0.63
LINC01397-201ENST00000554808 C11orf95C9JLR9 678 aaPredicted RBP11.09□□□□□ -0.63
LINC01397-201ENST00000554808 SPATA31A3Q5VYP0 1347 aa11.09□□□□□ -0.63
LINC01397-201ENST00000554808 NWD2Q9ULI1 1742 aa11.08□□□□□ -0.64
LINC01397-201ENST00000554808 CGNL1Q0VF96 1302 aa11.08□□□□□ -0.64
LINC01397-201ENST00000554808 SLIT3O75094 1523 aa11.07□□□□□ -0.64
LINC01397-201ENST00000554808 ABCC6O95255 1503 aa11.07□□□□□ -0.64
LINC01397-201ENST00000554808 NSD3Q9BZ95 1437 aa11.07□□□□□ -0.64
LINC01397-201ENST00000554808 FAM208AQ9UK61 1670 aaKnown RBP11.07□□□□□ -0.64
LINC01397-201ENST00000554808 TTC21BQ7Z4L5 1316 aa11.07□□□□□ -0.64
LINC01397-201ENST00000554808 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.06□□□□□ -0.64
LINC01397-201ENST00000554808 PNPLA6Q8IY17 1366 aa11.06□□□□□ -0.64
LINC01397-201ENST00000554808 COL14A1Q05707 1796 aaKnown RBP11.06□□□□□ -0.64
LINC01397-201ENST00000554808 RGPD5Q99666 1765 aa11.06□□□□□ -0.64
LINC01397-201ENST00000554808 PLCH1Q4KWH8 1693 aa11.06□□□□□ -0.64
LINC01397-201ENST00000554808 SRCAPQ6ZRS2 3230 aa11.06□□□□□ -0.64
LINC01397-201ENST00000554808 SPATA31A6Q5VVP1 1343 aa11.06□□□□□ -0.64
LINC01397-201ENST00000554808 USP31Q70CQ4 1352 aa11.05□□□□□ -0.64
LINC01397-201ENST00000554808 NPC1L1Q9UHC9 1359 aa11.05□□□□□ -0.64
LINC01397-201ENST00000554808 PAK3O75914 559 aaPredicted RBP11.05□□□□□ -0.64
LINC01397-201ENST00000554808 NLRP13Q86W25 1043 aa11.05□□□□□ -0.64
LINC01397-201ENST00000554808 PANK3Q9H999 370 aa11.05□□□□□ -0.64
LINC01397-201ENST00000554808 KNSTRNQ9Y448 316 aa11.05□□□□□ -0.64
LINC01397-201ENST00000554808 EP400Q96L91 3159 aa11.05□□□□□ -0.64
LINC01397-201ENST00000554808 CDK12Q9NYV4 1490 aaPredicted RBP11.05□□□□□ -0.64
LINC01397-201ENST00000554808 OVOS2A0A0J9YW53 1432 aa11.04□□□□□ -0.64
LINC01397-201ENST00000554808 OVOS2Q6IE36 1432 aa11.04□□□□□ -0.64
LINC01397-201ENST00000554808 ABTB2Q8N961 1025 aa11.04□□□□□ -0.64
LINC01397-201ENST00000554808 DDX17Q92841 729 aaKnown RBP11.04□□□□□ -0.64
LINC01397-201ENST00000554808 XPCQ01831 940 aaPredicted RBP11.03□□□□□ -0.64
LINC01397-201ENST00000554808 USP19O94966 1318 aa11.03□□□□□ -0.64
LINC01397-201ENST00000554808 RGS12O14924 1447 aa11.02□□□□□ -0.64
LINC01397-201ENST00000554808 LMOD2Q6P5Q4 547 aa11.02□□□□□ -0.65
LINC01397-201ENST00000554808 KCNH5Q8NCM2 988 aa11.02□□□□□ -0.65
LINC01397-201ENST00000554808 UPF1Q92900 1129 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINC01397-201ENST00000554808 COG3Q96JB2 828 aa11.02□□□□□ -0.65
LINC01397-201ENST00000554808 NFAT5O94916 1531 aa11.02□□□□□ -0.65
LINC01397-201ENST00000554808 COL18A1P39060 1754 aa11.01□□□□□ -0.65
LINC01397-201ENST00000554808 NLRP6P59044 892 aa11.01□□□□□ -0.65
LINC01397-201ENST00000554808 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINC01397-201ENST00000554808 LMO7Q8WWI1 1683 aa11.01□□□□□ -0.65
LINC01397-201ENST00000554808 NRAPQ86VF7 1730 aa11.01□□□□□ -0.65
LINC01397-201ENST00000554808 PER1O15534 1290 aaPredicted RBP11□□□□□ -0.65
LINC01397-201ENST00000554808 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
LINC01397-201ENST00000554808 MEX3CQ5U5Q3 659 aaKnown RBP11□□□□□ -0.65
LINC01397-201ENST00000554808 CARD14Q9BXL6 1004 aa11□□□□□ -0.65
LINC01397-201ENST00000554808 FYB1O15117 783 aa10.99□□□□□ -0.65
LINC01397-201ENST00000554808 ZNF772Q68DY9 489 aaPredicted RBP10.99□□□□□ -0.65
LINC01397-201ENST00000554808 WNK3Q9BYP7 1800 aa10.99□□□□□ -0.65
LINC01397-201ENST00000554808 CPDO75976 1380 aa10.99□□□□□ -0.65
LINC01397-201ENST00000554808 KIF24Q5T7B8 1368 aa10.99□□□□□ -0.65
LINC01397-201ENST00000554808 DDX10Q13206 875 aaKnown RBP10.98□□□□□ -0.65
LINC01397-201ENST00000554808 NME9Q86XW9 330 aa10.98□□□□□ -0.65
LINC01397-201ENST00000554808 AATKQ6ZMQ8 1374 aa10.98□□□□□ -0.65
LINC01397-201ENST00000554808 AMER1Q5JTC6 1135 aaPredicted RBP10.97□□□□□ -0.65
LINC01397-201ENST00000554808 AFF2P51816 1311 aa10.97□□□□□ -0.65
LINC01397-201ENST00000554808 RTL1A6NKG5 1358 aa10.97□□□□□ -0.65
LINC01397-201ENST00000554808 RGPD2P0DJD1 1756 aa10.97□□□□□ -0.65
LINC01397-201ENST00000554808 GCP02774 474 aa10.96□□□□□ -0.65
LINC01397-201ENST00000554808 GGNBP2Q9H3C7 697 aa10.96□□□□□ -0.65
LINC01397-201ENST00000554808 PEAK1Q9H792 1746 aa10.95□□□□□ -0.66
LINC01397-201ENST00000554808 SMG6Q86US8 1419 aaKnown RBP10.95□□□□□ -0.66
LINC01397-201ENST00000554808 NUTM2BA6NNL0 878 aaPredicted RBP10.95□□□□□ -0.66
LINC01397-201ENST00000554808 NUTM2EB1AL46 878 aaPredicted RBP10.95□□□□□ -0.66
LINC01397-201ENST00000554808 NUTM2AQ8IVF1 878 aaPredicted RBP10.95□□□□□ -0.66
LINC01397-201ENST00000554808 CAMTA1Q9Y6Y1 1673 aa10.95□□□□□ -0.66
LINC01397-201ENST00000554808 BLMP54132 1417 aaPredicted RBP10.94□□□□□ -0.66
LINC01397-201ENST00000554808 RXRBP28702 533 aa10.94□□□□□ -0.66
LINC01397-201ENST00000554808 NUTM2GQ5VZR2 741 aa10.94□□□□□ -0.66
LINC01397-201ENST00000554808 MORC1Q86VD1 984 aa10.94□□□□□ -0.66
LINC01397-201ENST00000554808 VIRMAQ69YN4 1812 aaKnown RBP10.93□□□□□ -0.66
LINC01397-201ENST00000554808 PARD3Q8TEW0 1356 aa10.93□□□□□ -0.66
LINC01397-201ENST00000554808 RALBP1Q15311 655 aa10.93□□□□□ -0.66
LINC01397-201ENST00000554808 SLIT2O94813 1529 aa10.93□□□□□ -0.66
LINC01397-201ENST00000554808 PARP4Q9UKK3 1724 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms