RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 PAK3O75914 559 aaPredicted RBP29.79■■■□□ 2.36
SDR39U1-208ENST00000554698 AKAP12Q02952 1782 aa29.79■■■□□ 2.36
SDR39U1-208ENST00000554698 COL22A1Q8NFW1 1626 aaPredicted RBP29.79■■■□□ 2.36
SDR39U1-208ENST00000554698 ANKRD36BQ8N2N9 1353 aa29.78■■■□□ 2.36
SDR39U1-208ENST00000554698 ALS2Q96Q42 1657 aa29.78■■■□□ 2.36
SDR39U1-208ENST00000554698 KIF7Q2M1P5 1343 aa29.78■■■□□ 2.36
SDR39U1-208ENST00000554698 MYOM1P52179 1685 aa29.77■■■□□ 2.36
SDR39U1-208ENST00000554698 POLR3GLQ9BT43 218 aa29.76■■■□□ 2.35
SDR39U1-208ENST00000554698 LMOD2Q6P5Q4 547 aa29.75■■■□□ 2.35
SDR39U1-208ENST00000554698 MON2Q7Z3U7 1717 aa29.75■■■□□ 2.35
SDR39U1-208ENST00000554698 NRKQ7Z2Y5 1582 aa29.74■■■□□ 2.35
SDR39U1-208ENST00000554698 TTC21BQ7Z4L5 1316 aa29.74■■■□□ 2.35
SDR39U1-208ENST00000554698 EDC4Q6P2E9 1401 aaKnown RBP29.73■■■□□ 2.35
SDR39U1-208ENST00000554698 TTC21AQ8NDW8 1320 aa29.71■■■□□ 2.35
SDR39U1-208ENST00000554698 CCDC7Q96M83 1385 aa29.71■■■□□ 2.35
SDR39U1-208ENST00000554698 LRP6O75581 1613 aa29.71■■■□□ 2.35
SDR39U1-208ENST00000554698 ABTB2Q8N961 1025 aa29.7■■■□□ 2.35
SDR39U1-208ENST00000554698 MED1Q15648 1581 aaPredicted RBP29.7■■■□□ 2.34
SDR39U1-208ENST00000554698 WASHC2AQ641Q2 1341 aa29.7■■■□□ 2.34
SDR39U1-208ENST00000554698 NUTM2BA6NNL0 878 aaPredicted RBP29.67■■■□□ 2.34
SDR39U1-208ENST00000554698 NUTM2EB1AL46 878 aaPredicted RBP29.67■■■□□ 2.34
SDR39U1-208ENST00000554698 NUTM2AQ8IVF1 878 aaPredicted RBP29.67■■■□□ 2.34
SDR39U1-208ENST00000554698 NUTM2GQ5VZR2 741 aa29.65■■■□□ 2.34
SDR39U1-208ENST00000554698 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.65■■■□□ 2.34
SDR39U1-208ENST00000554698 CABLES1Q8TDN4 633 aa29.65■■■□□ 2.34
SDR39U1-208ENST00000554698 CARD14Q9BXL6 1004 aa29.65■■■□□ 2.34
SDR39U1-208ENST00000554698 PIK3C2AO00443 1686 aa29.65■■■□□ 2.34
SDR39U1-208ENST00000554698 USP19O94966 1318 aa29.64■■■□□ 2.34
SDR39U1-208ENST00000554698 NLRP13Q86W25 1043 aa29.64■■■□□ 2.33
SDR39U1-208ENST00000554698 NLRP6P59044 892 aa29.62■■■□□ 2.33
SDR39U1-208ENST00000554698 CRYBG1Q9Y4K1 1723 aa29.61■■■□□ 2.33
SDR39U1-208ENST00000554698 NME9Q86XW9 330 aa29.61■■■□□ 2.33
SDR39U1-208ENST00000554698 PANK3Q9H999 370 aa29.61■■■□□ 2.33
SDR39U1-208ENST00000554698 USP31Q70CQ4 1352 aa29.6■■■□□ 2.33
SDR39U1-208ENST00000554698 ABCA3Q99758 1704 aa29.6■■■□□ 2.33
SDR39U1-208ENST00000554698 PLEKHG5O94827 1062 aa29.6■■■□□ 2.33
SDR39U1-208ENST00000554698 NSD3Q9BZ95 1437 aa29.59■■■□□ 2.33
SDR39U1-208ENST00000554698 ADAMTS2O95450 1211 aa29.58■■■□□ 2.33
SDR39U1-208ENST00000554698 HAP1P54257 671 aaPredicted RBP29.57■■■□□ 2.32
SDR39U1-208ENST00000554698 MEX3CQ5U5Q3 659 aaKnown RBP29.56■■■□□ 2.32
SDR39U1-208ENST00000554698 ZRANB1Q9UGI0 708 aa29.56■■■□□ 2.32
SDR39U1-208ENST00000554698 SLIT3O75094 1523 aa29.56■■■□□ 2.32
SDR39U1-208ENST00000554698 USP54Q70EL1 1684 aa29.55■■■□□ 2.32
SDR39U1-208ENST00000554698 PHRF1Q9P1Y6 1649 aaKnown RBP29.55■■■□□ 2.32
SDR39U1-208ENST00000554698 OVOS2A0A0J9YW53 1432 aa29.54■■■□□ 2.32
SDR39U1-208ENST00000554698 OVOS2Q6IE36 1432 aa29.54■■■□□ 2.32
SDR39U1-208ENST00000554698 FYB1O15117 783 aa29.53■■■□□ 2.32
SDR39U1-208ENST00000554698 GCP02774 474 aa29.53■■■□□ 2.32
SDR39U1-208ENST00000554698 MARF1Q9Y4F3 1742 aaKnown RBP29.53■■■□□ 2.32
SDR39U1-208ENST00000554698 C8orf37Q96NL8 207 aa29.51■■■□□ 2.31
SDR39U1-208ENST00000554698 CGNL1Q0VF96 1302 aa29.5■■■□□ 2.31
SDR39U1-208ENST00000554698 KCNH5Q8NCM2 988 aa29.49■■■□□ 2.31
SDR39U1-208ENST00000554698 CPDO75976 1380 aa29.48■■■□□ 2.31
SDR39U1-208ENST00000554698 COG3Q96JB2 828 aa29.48■■■□□ 2.31
SDR39U1-208ENST00000554698 GGNBP2Q9H3C7 697 aa29.48■■■□□ 2.31
SDR39U1-208ENST00000554698 NGLY1Q96IV0 654 aa29.47■■■□□ 2.31
SDR39U1-208ENST00000554698 KIAA0232Q92628 1395 aa29.47■■■□□ 2.31
SDR39U1-208ENST00000554698 FAM83GA6ND36 823 aa29.46■■■□□ 2.31
SDR39U1-208ENST00000554698 PER1O15534 1290 aaPredicted RBP29.46■■■□□ 2.31
SDR39U1-208ENST00000554698 ZC3H6P61129 1189 aaKnown RBP29.46■■■□□ 2.31
SDR39U1-208ENST00000554698 NFAT5O94916 1531 aa29.45■■■□□ 2.31
SDR39U1-208ENST00000554698 FNBP4Q8N3X1 1017 aaPredicted RBP29.45■■■□□ 2.31
SDR39U1-208ENST00000554698 PRDM11Q9NQV5 511 aa29.44■■■□□ 2.3
SDR39U1-208ENST00000554698 KNSTRNQ9Y448 316 aa29.44■■■□□ 2.3
SDR39U1-208ENST00000554698 AFF2P51816 1311 aa29.44■■■□□ 2.3
SDR39U1-208ENST00000554698 PHF23Q9BUL5 403 aaPredicted RBP29.43■■■□□ 2.3
SDR39U1-208ENST00000554698 KIF20BQ96Q89 1820 aa29.43■■■□□ 2.3
SDR39U1-208ENST00000554698 RGS17Q9UGC6 210 aaPredicted RBP29.42■■■□□ 2.3
SDR39U1-208ENST00000554698 SLIT2O94813 1529 aa29.42■■■□□ 2.3
SDR39U1-208ENST00000554698 NSD2O96028 1365 aa29.41■■■□□ 2.3
SDR39U1-208ENST00000554698 SOX12O15370 315 aa29.4■■■□□ 2.3
SDR39U1-208ENST00000554698 AMER1Q5JTC6 1135 aaPredicted RBP29.39■■■□□ 2.3
SDR39U1-208ENST00000554698 ARHGEF25Q86VW2 580 aa29.39■■■□□ 2.3
SDR39U1-208ENST00000554698 COL14A1Q05707 1796 aaKnown RBP29.39■■■□□ 2.3
SDR39U1-208ENST00000554698 CHRNA2Q15822 529 aa29.39■■■□□ 2.29
SDR39U1-208ENST00000554698 BCL9LQ86UU0 1499 aa29.38■■■□□ 2.29
SDR39U1-208ENST00000554698 ZNF772Q68DY9 489 aaPredicted RBP29.38■■■□□ 2.29
SDR39U1-208ENST00000554698 AATKQ6ZMQ8 1374 aa29.36■■■□□ 2.29
SDR39U1-208ENST00000554698 USP21Q9UK80 565 aa29.36■■■□□ 2.29
SDR39U1-208ENST00000554698 PLCH1Q4KWH8 1693 aa29.35■■■□□ 2.29
SDR39U1-208ENST00000554698 ZNF316A6NFI3 1004 aaPredicted RBP29.35■■■□□ 2.29
SDR39U1-208ENST00000554698 BTG4Q9NY30 223 aa29.34■■■□□ 2.29
SDR39U1-208ENST00000554698 NPC1L1Q9UHC9 1359 aa29.34■■■□□ 2.29
SDR39U1-208ENST00000554698 UNC5CLQ8IV45 518 aa29.33■■■□□ 2.29
SDR39U1-208ENST00000554698 LMO7Q8WWI1 1683 aa29.33■■■□□ 2.29
SDR39U1-208ENST00000554698 NWD2Q9ULI1 1742 aa29.33■■■□□ 2.29
SDR39U1-208ENST00000554698 ANKRD26Q9UPS8 1709 aa29.31■■■□□ 2.28
SDR39U1-208ENST00000554698 CAMTA1Q9Y6Y1 1673 aa29.31■■■□□ 2.28
SDR39U1-208ENST00000554698 ABCC6O95255 1503 aa29.3■■■□□ 2.28
SDR39U1-208ENST00000554698 ZBTB7CA1YPR0 619 aa29.3■■■□□ 2.28
SDR39U1-208ENST00000554698 FBLN1P23142 703 aa29.3■■■□□ 2.28
SDR39U1-208ENST00000554698 MAP3K19Q56UN5 1328 aa29.29■■■□□ 2.28
SDR39U1-208ENST00000554698 COL18A1P39060 1754 aa29.29■■■□□ 2.28
SDR39U1-208ENST00000554698 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.29■■■□□ 2.28
SDR39U1-208ENST00000554698 DDX10Q13206 875 aaKnown RBP29.28■■■□□ 2.28
SDR39U1-208ENST00000554698 POTEAQ6S8J7 498 aa29.28■■■□□ 2.28
SDR39U1-208ENST00000554698 ATRNO75882 1429 aa29.28■■■□□ 2.28
SDR39U1-208ENST00000554698 TRPC5Q9UL62 973 aaPredicted RBP29.27■■■□□ 2.28
SDR39U1-208ENST00000554698 AXIN2Q9Y2T1 843 aa29.27■■■□□ 2.28
SDR39U1-208ENST00000554698 NRAPQ86VF7 1730 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms