RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 EPRSP07814 1512 aaKnown RBP9.24□□□□□ -0.93
VPS33B-203ENST00000554264 IQGAP2Q13576 1575 aa9.24□□□□□ -0.93
VPS33B-203ENST00000554264 HECW2Q9P2P5 1572 aa9.24□□□□□ -0.93
VPS33B-203ENST00000554264 COL17A1Q9UMD9 1497 aaPredicted RBP9.23□□□□□ -0.93
VPS33B-203ENST00000554264 KDM5BQ9UGL1 1544 aa9.23□□□□□ -0.93
VPS33B-203ENST00000554264 TLL1O43897 1013 aa9.23□□□□□ -0.93
VPS33B-203ENST00000554264 RNF19BQ6ZMZ0 732 aa9.23□□□□□ -0.93
VPS33B-203ENST00000554264 DDRGK1Q96HY6 314 aa9.23□□□□□ -0.93
VPS33B-203ENST00000554264 LIMD1Q9UGP4 676 aa9.23□□□□□ -0.93
VPS33B-203ENST00000554264 NR1I2O75469 434 aa9.22□□□□□ -0.93
VPS33B-203ENST00000554264 GRIPAP1Q4V328 841 aa9.22□□□□□ -0.93
VPS33B-203ENST00000554264 RSBN1LQ6PCB5 846 aaPredicted RBP9.22□□□□□ -0.93
VPS33B-203ENST00000554264 SYMPKQ92797 1274 aaKnown RBP9.22□□□□□ -0.93
VPS33B-203ENST00000554264 MAP3K4Q9Y6R4 1608 aa9.22□□□□□ -0.93
VPS33B-203ENST00000554264 SPTLC1O15269 473 aa9.21□□□□□ -0.94
VPS33B-203ENST00000554264 FDX1P10109 184 aa9.21□□□□□ -0.94
VPS33B-203ENST00000554264 TRIM26Q12899 539 aaPredicted RBP9.21□□□□□ -0.94
VPS33B-203ENST00000554264 BRICD5Q6PL45 260 aa9.21□□□□□ -0.94
VPS33B-203ENST00000554264 RIC3Q7Z5B4 369 aa9.21□□□□□ -0.94
VPS33B-203ENST00000554264 POLR3EQ9NVU0 708 aa9.21□□□□□ -0.94
VPS33B-203ENST00000554264 DISP1Q96F81 1524 aa9.21□□□□□ -0.94
VPS33B-203ENST00000554264 FBXO31Q5XUX0 539 aaPredicted RBP9.2□□□□□ -0.94
VPS33B-203ENST00000554264 PROCA1Q8NCQ7 364 aaPredicted RBP9.2□□□□□ -0.94
VPS33B-203ENST00000554264 PCGF6Q9BYE7 350 aa9.2□□□□□ -0.94
VPS33B-203ENST00000554264 DIXDC1Q155Q3 683 aa9.19□□□□□ -0.94
VPS33B-203ENST00000554264 IFFO2Q5TF58 517 aa9.19□□□□□ -0.94
VPS33B-203ENST00000554264 FAM160A2Q8N612 972 aaPredicted RBP9.19□□□□□ -0.94
VPS33B-203ENST00000554264 SKIV2LQ15477 1246 aaKnown RBP9.18□□□□□ -0.94
VPS33B-203ENST00000554264 SH3D19Q5HYK7 790 aa9.18□□□□□ -0.94
VPS33B-203ENST00000554264 SPSB2Q99619 263 aa9.18□□□□□ -0.94
VPS33B-203ENST00000554264 RSPH6AQ9H0K4 717 aa9.18□□□□□ -0.94
VPS33B-203ENST00000554264 UGGT2Q9NYU1 1516 aa9.18□□□□□ -0.94
VPS33B-203ENST00000554264 SALL2Q9Y467 1007 aaPredicted RBP9.18□□□□□ -0.94
VPS33B-203ENST00000554264 WDR7Q9Y4E6 1490 aa9.18□□□□□ -0.94
VPS33B-203ENST00000554264 ZCCHC11Q5TAX3 1644 aaKnown RBP9.17□□□□□ -0.94
VPS33B-203ENST00000554264 GJA5P36382 358 aa9.17□□□□□ -0.94
VPS33B-203ENST00000554264 RAPGEF2Q9Y4G8 1499 aa9.16□□□□□ -0.94
VPS33B-203ENST00000554264 FMNL1O95466 1100 aaPredicted RBP9.16□□□□□ -0.94
VPS33B-203ENST00000554264 QPCTQ16769 361 aa9.16□□□□□ -0.94
VPS33B-203ENST00000554264 CSPP1Q1MSJ5 1256 aa9.16□□□□□ -0.94
VPS33B-203ENST00000554264 CABLES1Q8TDN4 633 aa9.16□□□□□ -0.94
VPS33B-203ENST00000554264 MAGI3Q5TCQ9 1506 aa9.15□□□□□ -0.94
VPS33B-203ENST00000554264 CD109Q6YHK3 1445 aa9.15□□□□□ -0.94
VPS33B-203ENST00000554264 ADH1BP00325 375 aa9.15□□□□□ -0.94
VPS33B-203ENST00000554264 CLK2P49760 499 aaKnown RBP9.15□□□□□ -0.94
VPS33B-203ENST00000554264 FBXO41Q8TF61 875 aa9.15□□□□□ -0.94
VPS33B-203ENST00000554264 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.15□□□□□ -0.94
VPS33B-203ENST00000554264 KIAA0556O60303 1618 aa9.15□□□□□ -0.94
VPS33B-203ENST00000554264 Q3C1V9 767 aa9.14□□□□□ -0.95
VPS33B-203ENST00000554264 PRDM9Q9NQV7 894 aa9.14□□□□□ -0.95
VPS33B-203ENST00000554264 C6orf229H3BNL8 230 aa9.13□□□□□ -0.95
VPS33B-203ENST00000554264 LILRB3O75022 631 aa9.13□□□□□ -0.95
VPS33B-203ENST00000554264 S1PR4O95977 384 aa9.13□□□□□ -0.95
VPS33B-203ENST00000554264 TUSC1Q2TAM9 212 aa9.13□□□□□ -0.95
VPS33B-203ENST00000554264 PPP1R18Q6NYC8 613 aa9.13□□□□□ -0.95
VPS33B-203ENST00000554264 USB1Q9BQ65 265 aaKnown RBP9.13□□□□□ -0.95
VPS33B-203ENST00000554264 PPEF1O14829 653 aaPredicted RBP9.12□□□□□ -0.95
VPS33B-203ENST00000554264 RTL5Q5HYW3 569 aaPredicted RBP9.12□□□□□ -0.95
VPS33B-203ENST00000554264 GOPCQ9HD26 462 aa9.12□□□□□ -0.95
VPS33B-203ENST00000554264 GOLGA3Q08378 1498 aa9.12□□□□□ -0.95
VPS33B-203ENST00000554264 CFAP43Q8NDM7 1665 aa9.12□□□□□ -0.95
VPS33B-203ENST00000554264 A0A0G2JS52 829 aa9.11□□□□□ -0.95
VPS33B-203ENST00000554264 MTMR2Q13614 643 aa9.11□□□□□ -0.95
VPS33B-203ENST00000554264 RETREG3Q86VR2 466 aa9.11□□□□□ -0.95
VPS33B-203ENST00000554264 SLC6A16Q9GZN6 736 aa9.11□□□□□ -0.95
VPS33B-203ENST00000554264 CFAP99D6REC4 459 aa9.1□□□□□ -0.95
VPS33B-203ENST00000554264 MSS51Q4VC12 460 aa9.1□□□□□ -0.95
VPS33B-203ENST00000554264 PRPF38BQ5VTL8 546 aaKnown RBP9.1□□□□□ -0.95
VPS33B-203ENST00000554264 RNF223E7ERA6 249 aa9.09□□□□□ -0.95
VPS33B-203ENST00000554264 FAM9AQ8IZU1 332 aaPredicted RBP9.09□□□□□ -0.95
VPS33B-203ENST00000554264 PRR7Q8TB68 274 aa9.09□□□□□ -0.95
VPS33B-203ENST00000554264 ZBTB3Q9H5J0 574 aa9.09□□□□□ -0.95
VPS33B-203ENST00000554264 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.09□□□□□ -0.95
VPS33B-203ENST00000554264 ARAP3Q8WWN8 1544 aa9.09□□□□□ -0.95
VPS33B-203ENST00000554264 PHLDB1Q86UU1 1377 aa9.09□□□□□ -0.95
VPS33B-203ENST00000554264 ABCA8O94911 1581 aa9.08□□□□□ -0.96
VPS33B-203ENST00000554264 MMP16P51512 607 aa9.08□□□□□ -0.96
VPS33B-203ENST00000554264 KIF21BO75037 1637 aa9.08□□□□□ -0.96
VPS33B-203ENST00000554264 NUTM2BA6NNL0 878 aaPredicted RBP9.07□□□□□ -0.96
VPS33B-203ENST00000554264 NUTM2EB1AL46 878 aaPredicted RBP9.07□□□□□ -0.96
VPS33B-203ENST00000554264 NUTM2DQ5VT03 806 aaPredicted RBP9.07□□□□□ -0.96
VPS33B-203ENST00000554264 NUTM2AQ8IVF1 878 aaPredicted RBP9.07□□□□□ -0.96
VPS33B-203ENST00000554264 PCMTD1Q96MG8 357 aaPredicted RBP9.07□□□□□ -0.96
VPS33B-203ENST00000554264 PTPRMP28827 1452 aa9.07□□□□□ -0.96
VPS33B-203ENST00000554264 SPDYE5A6NIY4 337 aa9.06□□□□□ -0.96
VPS33B-203ENST00000554264 DXOO77932 396 aaKnown RBP9.06□□□□□ -0.96
VPS33B-203ENST00000554264 PLA2G2CQ5R387 149 aa9.06□□□□□ -0.96
VPS33B-203ENST00000554264 PPP2R2DQ66LE6 453 aa9.06□□□□□ -0.96
VPS33B-203ENST00000554264 EMID1Q96A84 441 aaPredicted RBP9.06□□□□□ -0.96
VPS33B-203ENST00000554264 ATP1B4Q9UN42 357 aaPredicted RBP9.05□□□□□ -0.96
VPS33B-203ENST00000554264 CTTNBP2Q8WZ74 1663 aa9.04□□□□□ -0.96
VPS33B-203ENST00000554264 ADAMTSL3P82987 1691 aa9.04□□□□□ -0.96
VPS33B-203ENST00000554264 PER1O15534 1290 aaPredicted RBP9.03□□□□□ -0.96
VPS33B-203ENST00000554264 JUNDP17535 347 aa9.03□□□□□ -0.96
VPS33B-203ENST00000554264 CTDSPL2Q05D32 466 aa9.02□□□□□ -0.97
VPS33B-203ENST00000554264 TMEM132AQ24JP5 1023 aa9.02□□□□□ -0.97
VPS33B-203ENST00000554264 FCF1Q9Y324 198 aaKnown RBP9.02□□□□□ -0.97
VPS33B-203ENST00000554264 PCF11O94913 1555 aaKnown RBP9.02□□□□□ -0.97
VPS33B-203ENST00000554264 NEO1Q92859 1461 aa9.02□□□□□ -0.97
VPS33B-203ENST00000554264 ABCA9Q8IUA7 1624 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms