RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 USP6P35125 1406 aa15.65■□□□□ 0.1
IFT43-206ENST00000554026 CPSF1Q10570 1443 aaKnown RBP15.65■□□□□ 0.1
IFT43-206ENST00000554026 COL22A1Q8NFW1 1626 aaPredicted RBP15.65■□□□□ 0.1
IFT43-206ENST00000554026 ZNF772Q68DY9 489 aaPredicted RBP15.64■□□□□ 0.09
IFT43-206ENST00000554026 TRPM3Q9HCF6 1732 aaPredicted RBP15.64■□□□□ 0.09
IFT43-206ENST00000554026 KTN1Q86UP2 1357 aaKnown RBP15.63■□□□□ 0.09
IFT43-206ENST00000554026 AKAP12Q02952 1782 aa15.63■□□□□ 0.09
IFT43-206ENST00000554026 LMOD2Q6P5Q4 547 aa15.63■□□□□ 0.09
IFT43-206ENST00000554026 SLC12A5Q9H2X9 1139 aa15.63■□□□□ 0.09
IFT43-206ENST00000554026 TTC21AQ8NDW8 1320 aa15.63■□□□□ 0.09
IFT43-206ENST00000554026 ANKRD36BQ8N2N9 1353 aa15.62■□□□□ 0.09
IFT43-206ENST00000554026 ALS2Q96Q42 1657 aa15.61■□□□□ 0.09
IFT43-206ENST00000554026 CDK12Q9NYV4 1490 aaPredicted RBP15.61■□□□□ 0.09
IFT43-206ENST00000554026 NLRP13Q86W25 1043 aa15.61■□□□□ 0.09
IFT43-206ENST00000554026 ABTB2Q8N961 1025 aa15.61■□□□□ 0.09
IFT43-206ENST00000554026 EDC4Q6P2E9 1401 aaKnown RBP15.6■□□□□ 0.09
IFT43-206ENST00000554026 MON2Q7Z3U7 1717 aa15.6■□□□□ 0.09
IFT43-206ENST00000554026 HAP1P54257 671 aaPredicted RBP15.6■□□□□ 0.09
IFT43-206ENST00000554026 SSH2Q76I76 1423 aa15.6■□□□□ 0.09
IFT43-206ENST00000554026 TTC21BQ7Z4L5 1316 aa15.59■□□□□ 0.09
IFT43-206ENST00000554026 A0A1W2PP64 1363 aa15.59■□□□□ 0.09
IFT43-206ENST00000554026 CD163L1Q9NR16 1453 aa15.59■□□□□ 0.09
IFT43-206ENST00000554026 NUTM2BA6NNL0 878 aaPredicted RBP15.58■□□□□ 0.08
IFT43-206ENST00000554026 NUTM2EB1AL46 878 aaPredicted RBP15.58■□□□□ 0.08
IFT43-206ENST00000554026 NUTM2AQ8IVF1 878 aaPredicted RBP15.58■□□□□ 0.08
IFT43-206ENST00000554026 POLR3GLQ9BT43 218 aa15.58■□□□□ 0.08
IFT43-206ENST00000554026 AFF2P51816 1311 aa15.56■□□□□ 0.08
IFT43-206ENST00000554026 NRKQ7Z2Y5 1582 aa15.56■□□□□ 0.08
IFT43-206ENST00000554026 MYOM1P52179 1685 aa15.55■□□□□ 0.08
IFT43-206ENST00000554026 KIF7Q2M1P5 1343 aa15.55■□□□□ 0.08
IFT43-206ENST00000554026 NLRP6P59044 892 aa15.55■□□□□ 0.08
IFT43-206ENST00000554026 UPF1Q92900 1129 aaKnown RBP eCLIP15.55■□□□□ 0.08
IFT43-206ENST00000554026 RGS12O14924 1447 aa15.54■□□□□ 0.08
IFT43-206ENST00000554026 USP19O94966 1318 aa15.54■□□□□ 0.08
IFT43-206ENST00000554026 RXRBP28702 533 aa15.54■□□□□ 0.08
IFT43-206ENST00000554026 KCNH5Q8NCM2 988 aa15.54■□□□□ 0.08
IFT43-206ENST00000554026 USP31Q70CQ4 1352 aa15.53■□□□□ 0.08
IFT43-206ENST00000554026 C11orf95C9JLR9 678 aaPredicted RBP15.53■□□□□ 0.08
IFT43-206ENST00000554026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.53■□□□□ 0.08
IFT43-206ENST00000554026 CCDC7Q96M83 1385 aa15.52■□□□□ 0.08
IFT43-206ENST00000554026 ADAMTS2O95450 1211 aa15.52■□□□□ 0.08
IFT43-206ENST00000554026 NGLY1Q96IV0 654 aa15.52■□□□□ 0.08
IFT43-206ENST00000554026 ABCA3Q99758 1704 aa15.51■□□□□ 0.07
IFT43-206ENST00000554026 MARF1Q9Y4F3 1742 aaKnown RBP15.51■□□□□ 0.07
IFT43-206ENST00000554026 PIK3C2AO00443 1686 aa15.51■□□□□ 0.07
IFT43-206ENST00000554026 NUTM2GQ5VZR2 741 aa15.51■□□□□ 0.07
IFT43-206ENST00000554026 CABLES1Q8TDN4 633 aa15.51■□□□□ 0.07
IFT43-206ENST00000554026 CGNL1Q0VF96 1302 aa15.5■□□□□ 0.07
IFT43-206ENST00000554026 GCP02774 474 aa15.5■□□□□ 0.07
IFT43-206ENST00000554026 COG3Q96JB2 828 aa15.5■□□□□ 0.07
IFT43-206ENST00000554026 C8orf37Q96NL8 207 aa15.5■□□□□ 0.07
IFT43-206ENST00000554026 CRYBG1Q9Y4K1 1723 aa15.5■□□□□ 0.07
IFT43-206ENST00000554026 USP54Q70EL1 1684 aa15.5■□□□□ 0.07
IFT43-206ENST00000554026 PHRF1Q9P1Y6 1649 aaKnown RBP15.5■□□□□ 0.07
IFT43-206ENST00000554026 SLIT3O75094 1523 aa15.49■□□□□ 0.07
IFT43-206ENST00000554026 PANK3Q9H999 370 aa15.49■□□□□ 0.07
IFT43-206ENST00000554026 NSD3Q9BZ95 1437 aa15.49■□□□□ 0.07
IFT43-206ENST00000554026 CPDO75976 1380 aa15.49■□□□□ 0.07
IFT43-206ENST00000554026 WASHC2AQ641Q2 1341 aa15.48■□□□□ 0.07
IFT43-206ENST00000554026 PLEKHG5O94827 1062 aa15.48■□□□□ 0.07
IFT43-206ENST00000554026 NME9Q86XW9 330 aa15.48■□□□□ 0.07
IFT43-206ENST00000554026 FNBP4Q8N3X1 1017 aaPredicted RBP15.48■□□□□ 0.07
IFT43-206ENST00000554026 CARD14Q9BXL6 1004 aa15.47■□□□□ 0.07
IFT43-206ENST00000554026 PRDM11Q9NQV5 511 aa15.47■□□□□ 0.07
IFT43-206ENST00000554026 KNSTRNQ9Y448 316 aa15.47■□□□□ 0.07
IFT43-206ENST00000554026 COL14A1Q05707 1796 aaKnown RBP15.47■□□□□ 0.07
IFT43-206ENST00000554026 OVOS2A0A0J9YW53 1432 aa15.46■□□□□ 0.07
IFT43-206ENST00000554026 OVOS2Q6IE36 1432 aa15.46■□□□□ 0.07
IFT43-206ENST00000554026 FYB1O15117 783 aa15.46■□□□□ 0.07
IFT43-206ENST00000554026 NSD2O96028 1365 aa15.46■□□□□ 0.07
IFT43-206ENST00000554026 KIF20BQ96Q89 1820 aa15.45■□□□□ 0.06
IFT43-206ENST00000554026 RBM6P78332 1123 aaKnown RBP15.45■□□□□ 0.06
IFT43-206ENST00000554026 USP21Q9UK80 565 aa15.45■□□□□ 0.06
IFT43-206ENST00000554026 KIAA0232Q92628 1395 aa15.45■□□□□ 0.06
IFT43-206ENST00000554026 NWD2Q9ULI1 1742 aa15.44■□□□□ 0.06
IFT43-206ENST00000554026 FAM83GA6ND36 823 aa15.44■□□□□ 0.06
IFT43-206ENST00000554026 ZC3H6P61129 1189 aaKnown RBP15.44■□□□□ 0.06
IFT43-206ENST00000554026 SLIT2O94813 1529 aa15.43■□□□□ 0.06
IFT43-206ENST00000554026 TRPC5Q9UL62 973 aaPredicted RBP15.43■□□□□ 0.06
IFT43-206ENST00000554026 ABCC6O95255 1503 aa15.43■□□□□ 0.06
IFT43-206ENST00000554026 EP400Q96L91 3159 aa15.42■□□□□ 0.06
IFT43-206ENST00000554026 AATKQ6ZMQ8 1374 aa15.42■□□□□ 0.06
IFT43-206ENST00000554026 ARHGEF25Q86VW2 580 aa15.42■□□□□ 0.06
IFT43-206ENST00000554026 UNC5CLQ8IV45 518 aa15.42■□□□□ 0.06
IFT43-206ENST00000554026 GGNBP2Q9H3C7 697 aa15.42■□□□□ 0.06
IFT43-206ENST00000554026 QTRT2Q9H974 415 aaKnown RBP15.42■□□□□ 0.06
IFT43-206ENST00000554026 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.42■□□□□ 0.06
IFT43-206ENST00000554026 ZRANB1Q9UGI0 708 aa15.41■□□□□ 0.06
IFT43-206ENST00000554026 NFAT5O94916 1531 aa15.41■□□□□ 0.06
IFT43-206ENST00000554026 PLCH1Q4KWH8 1693 aa15.41■□□□□ 0.06
IFT43-206ENST00000554026 BTG4Q9NY30 223 aa15.4■□□□□ 0.06
IFT43-206ENST00000554026 BCL9LQ86UU0 1499 aa15.4■□□□□ 0.06
IFT43-206ENST00000554026 NPC1L1Q9UHC9 1359 aa15.39■□□□□ 0.05
IFT43-206ENST00000554026 SOX12O15370 315 aa15.39■□□□□ 0.05
IFT43-206ENST00000554026 ATRNO75882 1429 aa15.39■□□□□ 0.05
IFT43-206ENST00000554026 ANKRD26Q9UPS8 1709 aa15.39■□□□□ 0.05
IFT43-206ENST00000554026 KIF24Q5T7B8 1368 aa15.38■□□□□ 0.05
IFT43-206ENST00000554026 PER1O15534 1290 aaPredicted RBP15.38■□□□□ 0.05
IFT43-206ENST00000554026 EVA1CP58658 441 aa15.38■□□□□ 0.05
IFT43-206ENST00000554026 CHRNA2Q15822 529 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms