RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 LINC01559Q495D7 138 aa6.41□□□□□ -1.38
SLIRP-202ENST00000553981 LCE2CQ5TA81 110 aa6.41□□□□□ -1.38
SLIRP-202ENST00000553981 DESI1Q6ICB0 168 aa6.41□□□□□ -1.38
SLIRP-202ENST00000553981 KIFC2Q96AC6 838 aa6.41□□□□□ -1.38
SLIRP-202ENST00000553981 WASF2Q9Y6W5 498 aa6.41□□□□□ -1.38
SLIRP-202ENST00000553981 SPDYE5A6NIY4 337 aa6.4□□□□□ -1.38
SLIRP-202ENST00000553981 TERTO14746 1132 aaKnown RBP6.4□□□□□ -1.38
SLIRP-202ENST00000553981 PARP9Q8IXQ6 854 aa6.4□□□□□ -1.38
SLIRP-202ENST00000553981 BAP1Q92560 729 aa6.4□□□□□ -1.38
SLIRP-202ENST00000553981 TBC1D2Q9BYX2 928 aa6.4□□□□□ -1.38
SLIRP-202ENST00000553981 HMGXB3Q12766 1538 aa6.4□□□□□ -1.39
SLIRP-202ENST00000553981 WIPF1O43516 503 aa6.39□□□□□ -1.39
SLIRP-202ENST00000553981 BMP1P13497 986 aa6.39□□□□□ -1.39
SLIRP-202ENST00000553981 GJA5P36382 358 aa6.39□□□□□ -1.39
SLIRP-202ENST00000553981 RSBN1LQ6PCB5 846 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-202ENST00000553981 TRIM46Q7Z4K8 759 aa6.39□□□□□ -1.39
SLIRP-202ENST00000553981 ZNF511Q8NB15 262 aa6.39□□□□□ -1.39
SLIRP-202ENST00000553981 PCDHB15Q9Y5E8 787 aa6.39□□□□□ -1.39
SLIRP-202ENST00000553981 TLL2Q9Y6L7 1015 aa6.39□□□□□ -1.39
SLIRP-202ENST00000553981 TRIM66O15016 1216 aa6.38□□□□□ -1.39
SLIRP-202ENST00000553981 CAPN5O15484 640 aaPredicted RBP6.38□□□□□ -1.39
SLIRP-202ENST00000553981 DIXDC1Q155Q3 683 aa6.38□□□□□ -1.39
SLIRP-202ENST00000553981 MROH2BQ7Z745 1585 aa6.38□□□□□ -1.39
SLIRP-202ENST00000553981 KIF21AQ7Z4S6 1674 aa6.38□□□□□ -1.39
SLIRP-202ENST00000553981 CFAP99D6REC4 459 aa6.37□□□□□ -1.39
SLIRP-202ENST00000553981 VARSP26640 1264 aaKnown RBP6.37□□□□□ -1.39
SLIRP-202ENST00000553981 LYPD8Q6UX82 237 aa6.37□□□□□ -1.39
SLIRP-202ENST00000553981 SMARCA2P51531 1590 aa6.36□□□□□ -1.39
SLIRP-202ENST00000553981 SPTLC1O15269 473 aa6.36□□□□□ -1.39
SLIRP-202ENST00000553981 HRCP23327 699 aa6.36□□□□□ -1.39
SLIRP-202ENST00000553981 CTHP32929 405 aa6.36□□□□□ -1.39
SLIRP-202ENST00000553981 MPNDQ8N594 471 aa6.36□□□□□ -1.39
SLIRP-202ENST00000553981 PEG3Q9GZU2 1588 aa6.35□□□□□ -1.39
SLIRP-202ENST00000553981 F12P00748 615 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-202ENST00000553981 INSM1Q01101 510 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-202ENST00000553981 ZBTB3Q9H5J0 574 aa6.35□□□□□ -1.39
SLIRP-202ENST00000553981 BAZ1BQ9UIG0 1483 aaKnown RBP6.34□□□□□ -1.39
SLIRP-202ENST00000553981 PLEKHG3A1L390 1219 aa6.34□□□□□ -1.39
SLIRP-202ENST00000553981 NNTQ13423 1086 aa6.34□□□□□ -1.39
SLIRP-202ENST00000553981 RIC3Q7Z5B4 369 aa6.34□□□□□ -1.39
SLIRP-202ENST00000553981 CABLES1Q8TDN4 633 aa6.34□□□□□ -1.39
SLIRP-202ENST00000553981 AK7Q96M32 723 aa6.34□□□□□ -1.39
SLIRP-202ENST00000553981 MAP10Q9P2G4 905 aa6.34□□□□□ -1.39
SLIRP-202ENST00000553981 NXF1Q9UBU9 619 aaKnown RBP6.34□□□□□ -1.39
SLIRP-202ENST00000553981 STK17AQ9UEE5 414 aa6.34□□□□□ -1.39
SLIRP-202ENST00000553981 PRPF38BQ5VTL8 546 aaKnown RBP6.33□□□□□ -1.4
SLIRP-202ENST00000553981 FOXJ1Q92949 421 aa6.33□□□□□ -1.4
SLIRP-202ENST00000553981 ZFP42Q96MM3 310 aa6.33□□□□□ -1.4
SLIRP-202ENST00000553981 LAMC3Q9Y6N6 1575 aa6.32□□□□□ -1.4
SLIRP-202ENST00000553981 TIMP2P16035 220 aa6.32□□□□□ -1.4
SLIRP-202ENST00000553981 CSPP1Q1MSJ5 1256 aa6.32□□□□□ -1.4
SLIRP-202ENST00000553981 FAM174AQ8TBP5 190 aa6.32□□□□□ -1.4
SLIRP-202ENST00000553981 SLC16A10Q8TF71 515 aa6.32□□□□□ -1.4
SLIRP-202ENST00000553981 BAZ1AQ9NRL2 1556 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-202ENST00000553981 PER1O15534 1290 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-202ENST00000553981 ADH1CP00326 375 aa6.31□□□□□ -1.4
SLIRP-202ENST00000553981 WDR4P57081 412 aaKnown RBP6.31□□□□□ -1.4
SLIRP-202ENST00000553981 CDK15Q96Q40 435 aa6.31□□□□□ -1.4
SLIRP-202ENST00000553981 KLF16Q9BXK1 252 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-202ENST00000553981 LIMD1Q9UGP4 676 aa6.31□□□□□ -1.4
SLIRP-202ENST00000553981 PDE4DQ08499 809 aa6.3□□□□□ -1.4
SLIRP-202ENST00000553981 QPCTQ16769 361 aa6.3□□□□□ -1.4
SLIRP-202ENST00000553981 C4orf48Q5BLP8 95 aa6.3□□□□□ -1.4
SLIRP-202ENST00000553981 MYSM1Q5VVJ2 828 aa6.3□□□□□ -1.4
SLIRP-202ENST00000553981 MRPL14Q6P1L8 145 aaKnown RBP6.3□□□□□ -1.4
SLIRP-202ENST00000553981 NPAS3Q8IXF0 933 aa6.3□□□□□ -1.4
SLIRP-202ENST00000553981 GMPRP36959 345 aa6.29□□□□□ -1.4
SLIRP-202ENST00000553981 VEGFBP49765 207 aa6.29□□□□□ -1.4
SLIRP-202ENST00000553981 ARID5BQ14865 1188 aa6.29□□□□□ -1.4
SLIRP-202ENST00000553981 TSC1Q92574 1164 aa6.29□□□□□ -1.4
SLIRP-202ENST00000553981 PURBQ96QR8 312 aaKnown RBP6.29□□□□□ -1.4
SLIRP-202ENST00000553981 WIZO95785 1651 aa6.29□□□□□ -1.4
SLIRP-202ENST00000553981 NUTM2BA6NNL0 878 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-202ENST00000553981 NUTM2EB1AL46 878 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-202ENST00000553981 LILRB3O75022 631 aa6.28□□□□□ -1.4
SLIRP-202ENST00000553981 SCARF1Q14162 830 aa6.28□□□□□ -1.4
SLIRP-202ENST00000553981 TUSC1Q2TAM9 212 aa6.28□□□□□ -1.4
SLIRP-202ENST00000553981 NUTM2DQ5VT03 806 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-202ENST00000553981 NUTM2AQ8IVF1 878 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-202ENST00000553981 IRF7Q92985 503 aa6.28□□□□□ -1.4
SLIRP-202ENST00000553981 CADPSQ9ULU8 1353 aa6.28□□□□□ -1.4
SLIRP-202ENST00000553981 WDR62O43379 1518 aa6.27□□□□□ -1.41
SLIRP-202ENST00000553981 H3BM21 787 aa6.27□□□□□ -1.41
SLIRP-202ENST00000553981 ZIC2O95409 532 aaPredicted RBP6.27□□□□□ -1.41
SLIRP-202ENST00000553981 NR3C2P08235 984 aa6.27□□□□□ -1.41
SLIRP-202ENST00000553981 GRM5P41594 1212 aa6.27□□□□□ -1.41
SLIRP-202ENST00000553981 AGERQ15109 404 aa6.27□□□□□ -1.41
SLIRP-202ENST00000553981 BPHLQ86WA6 291 aaPredicted RBP6.27□□□□□ -1.41
SLIRP-202ENST00000553981 ITPKCQ96DU7 683 aa6.27□□□□□ -1.41
SLIRP-202ENST00000553981 ZFAND3Q9H8U3 227 aa6.27□□□□□ -1.41
SLIRP-202ENST00000553981 SLC24A3Q9HC58 644 aa6.27□□□□□ -1.41
SLIRP-202ENST00000553981 ERBB4Q15303 1308 aa6.26□□□□□ -1.41
SLIRP-202ENST00000553981 SOBPA7XYQ1 873 aa6.26□□□□□ -1.41
SLIRP-202ENST00000553981 LORP23490 312 aaPredicted RBP6.26□□□□□ -1.41
SLIRP-202ENST00000553981 NR5A1Q13285 461 aa6.26□□□□□ -1.41
SLIRP-202ENST00000553981 RTL5Q5HYW3 569 aaPredicted RBP6.26□□□□□ -1.41
SLIRP-202ENST00000553981 MRC2Q9UBG0 1479 aa6.26□□□□□ -1.41
SLIRP-202ENST00000553981 PDS5BQ9NTI5 1447 aa6.25□□□□□ -1.41
SLIRP-202ENST00000553981 SH3RF1Q7Z6J0 888 aa6.25□□□□□ -1.41
SLIRP-202ENST00000553981 ARMC2Q8NEN0 867 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms