RNA–Protein interactions for RNA: ENST00000553857.5

UBR7-203, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-203ENST00000553857 ZNF511Q8NB15 262 aa8.97□□□□□ -0.97
UBR7-203ENST00000553857 TRIM47Q96LD4 638 aa8.97□□□□□ -0.97
UBR7-203ENST00000553857 SLC24A3Q9HC58 644 aa8.97□□□□□ -0.97
UBR7-203ENST00000553857 MAP10Q9P2G4 905 aa8.97□□□□□ -0.97
UBR7-203ENST00000553857 LIMD1Q9UGP4 676 aa8.97□□□□□ -0.97
UBR7-203ENST00000553857 GJA5P36382 358 aa8.96□□□□□ -0.98
UBR7-203ENST00000553857 PDE4DQ08499 809 aa8.96□□□□□ -0.98
UBR7-203ENST00000553857 LYPD8Q6UX82 237 aa8.96□□□□□ -0.98
UBR7-203ENST00000553857 TRIM46Q7Z4K8 759 aa8.96□□□□□ -0.98
UBR7-203ENST00000553857 SPDYE5A6NIY4 337 aa8.95□□□□□ -0.98
UBR7-203ENST00000553857 PER1O15534 1290 aaPredicted RBP8.95□□□□□ -0.98
UBR7-203ENST00000553857 WFS1O76024 890 aa8.95□□□□□ -0.98
UBR7-203ENST00000553857 QPCTQ16769 361 aa8.95□□□□□ -0.98
UBR7-203ENST00000553857 F12P00748 615 aaPredicted RBP8.94□□□□□ -0.98
UBR7-203ENST00000553857 CTHP32929 405 aa8.94□□□□□ -0.98
UBR7-203ENST00000553857 MYSM1Q5VVJ2 828 aa8.94□□□□□ -0.98
UBR7-203ENST00000553857 FOXJ1Q92949 421 aa8.93□□□□□ -0.98
UBR7-203ENST00000553857 ZBTB3Q9H5J0 574 aa8.93□□□□□ -0.98
UBR7-203ENST00000553857 WASF2Q9Y6W5 498 aa8.93□□□□□ -0.98
UBR7-203ENST00000553857 CAPN5O15484 640 aaPredicted RBP8.92□□□□□ -0.98
UBR7-203ENST00000553857 PCGF6Q9BYE7 350 aa8.92□□□□□ -0.98
UBR7-203ENST00000553857 ZEB1P37275 1124 aaPredicted RBP8.91□□□□□ -0.98
UBR7-203ENST00000553857 DIXDC1Q155Q3 683 aa8.91□□□□□ -0.98
UBR7-203ENST00000553857 C4orf48Q5BLP8 95 aa8.91□□□□□ -0.98
UBR7-203ENST00000553857 SENP2Q9HC62 589 aa8.91□□□□□ -0.98
UBR7-203ENST00000553857 VARSP26640 1264 aaKnown RBP8.9□□□□□ -0.98
UBR7-203ENST00000553857 PRPF38BQ5VTL8 546 aaKnown RBP8.9□□□□□ -0.98
UBR7-203ENST00000553857 TERTO14746 1132 aaKnown RBP8.89□□□□□ -0.99
UBR7-203ENST00000553857 TRIM26Q12899 539 aaPredicted RBP8.89□□□□□ -0.99
UBR7-203ENST00000553857 NNTQ13423 1086 aa8.89□□□□□ -0.99
UBR7-203ENST00000553857 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
UBR7-203ENST00000553857 TSC1Q92574 1164 aa8.89□□□□□ -0.99
UBR7-203ENST00000553857 ABCC9O60706 1549 aa8.89□□□□□ -0.99
UBR7-203ENST00000553857 LILRB3O75022 631 aa8.88□□□□□ -0.99
UBR7-203ENST00000553857 FBXO31Q5XUX0 539 aaPredicted RBP8.87□□□□□ -0.99
UBR7-203ENST00000553857 KIFC2Q96AC6 838 aa8.87□□□□□ -0.99
UBR7-203ENST00000553857 KLF16Q9BXK1 252 aaPredicted RBP8.87□□□□□ -0.99
UBR7-203ENST00000553857 NACADO15069 1562 aa8.86□□□□□ -0.99
UBR7-203ENST00000553857 TIMP2P16035 220 aa8.86□□□□□ -0.99
UBR7-203ENST00000553857 ZFP42Q96MM3 310 aa8.86□□□□□ -0.99
UBR7-203ENST00000553857 NUTM2BA6NNL0 878 aaPredicted RBP8.85□□□□□ -0.99
UBR7-203ENST00000553857 NUTM2EB1AL46 878 aaPredicted RBP8.85□□□□□ -0.99
UBR7-203ENST00000553857 NR3C2P08235 984 aa8.85□□□□□ -0.99
UBR7-203ENST00000553857 NUTM2DQ5VT03 806 aaPredicted RBP8.85□□□□□ -0.99
UBR7-203ENST00000553857 NUTM2AQ8IVF1 878 aaPredicted RBP8.85□□□□□ -0.99
UBR7-203ENST00000553857 MPNDQ8N594 471 aa8.85□□□□□ -0.99
UBR7-203ENST00000553857 POLR3EQ9NVU0 708 aa8.85□□□□□ -0.99
UBR7-203ENST00000553857 WIPF1O43516 503 aa8.84□□□□□ -0.99
UBR7-203ENST00000553857 VEGFBP49765 207 aa8.84□□□□□ -0.99
UBR7-203ENST00000553857 ARID5BQ14865 1188 aa8.84□□□□□ -0.99
UBR7-203ENST00000553857 PLEKHG3A1L390 1219 aa8.83□□□□□ -1
UBR7-203ENST00000553857 ADH1CP00326 375 aa8.83□□□□□ -1
UBR7-203ENST00000553857 GRM5P41594 1212 aa8.83□□□□□ -1
UBR7-203ENST00000553857 WDR4P57081 412 aaKnown RBP8.83□□□□□ -1
UBR7-203ENST00000553857 TUSC1Q2TAM9 212 aa8.83□□□□□ -1
UBR7-203ENST00000553857 FAM174AQ8TBP5 190 aa8.83□□□□□ -1
UBR7-203ENST00000553857 CDK15Q96Q40 435 aa8.83□□□□□ -1
UBR7-203ENST00000553857 RSF1Q96T23 1441 aaPredicted RBP8.82□□□□□ -1
UBR7-203ENST00000553857 SOBPA7XYQ1 873 aa8.82□□□□□ -1
UBR7-203ENST00000553857 CLK2P49760 499 aaKnown RBP8.82□□□□□ -1
UBR7-203ENST00000553857 ZFAND3Q9H8U3 227 aa8.82□□□□□ -1
UBR7-203ENST00000553857 SCRIBQ14160 1630 aa8.81□□□□□ -1
UBR7-203ENST00000553857 MRPL14Q6P1L8 145 aaKnown RBP8.81□□□□□ -1
UBR7-203ENST00000553857 PURBQ96QR8 312 aaKnown RBP8.81□□□□□ -1
UBR7-203ENST00000553857 GPBP1L1Q9HC44 474 aaPredicted RBP8.81□□□□□ -1
UBR7-203ENST00000553857 RB1CC1Q8TDY2 1594 aa8.81□□□□□ -1
UBR7-203ENST00000553857 CTDSPL2Q05D32 466 aa8.8□□□□□ -1
UBR7-203ENST00000553857 AGERQ15109 404 aa8.8□□□□□ -1
UBR7-203ENST00000553857 SH3RF1Q7Z6J0 888 aa8.8□□□□□ -1
UBR7-203ENST00000553857 ITPKCQ96DU7 683 aa8.8□□□□□ -1
UBR7-203ENST00000553857 NXF1Q9UBU9 619 aaKnown RBP8.8□□□□□ -1
UBR7-203ENST00000553857 LOC105371045A0A1W2PR82 267 aa8.78□□□□□ -1
UBR7-203ENST00000553857 ZIC2O95409 532 aaPredicted RBP8.78□□□□□ -1
UBR7-203ENST00000553857 SH3BP5LQ7L8J4 393 aa8.78□□□□□ -1
UBR7-203ENST00000553857 BPHLQ86WA6 291 aaPredicted RBP8.78□□□□□ -1
UBR7-203ENST00000553857 C1QTNF2Q9BXJ5 285 aa8.78□□□□□ -1
UBR7-203ENST00000553857 ERBB4Q15303 1308 aa8.78□□□□□ -1
UBR7-203ENST00000553857 GMPRP36959 345 aa8.77□□□□□ -1.01
UBR7-203ENST00000553857 PROCA1Q8NCQ7 364 aaPredicted RBP8.77□□□□□ -1.01
UBR7-203ENST00000553857 HELBQ8NG08 1087 aaPredicted RBP8.76□□□□□ -1.01
UBR7-203ENST00000553857 LRRN4Q8WUT4 740 aa8.76□□□□□ -1.01
UBR7-203ENST00000553857 FAM117AQ9C073 453 aa8.76□□□□□ -1.01
UBR7-203ENST00000553857 MAGEB6P1A0A0J9YX57 407 aa8.75□□□□□ -1.01
UBR7-203ENST00000553857 LORP23490 312 aaPredicted RBP8.75□□□□□ -1.01
UBR7-203ENST00000553857 H3BM21 787 aa8.74□□□□□ -1.01
UBR7-203ENST00000553857 FSHRP23945 695 aa8.74□□□□□ -1.01
UBR7-203ENST00000553857 NR5A1Q13285 461 aa8.74□□□□□ -1.01
UBR7-203ENST00000553857 C6orf118Q5T5N4 469 aa8.74□□□□□ -1.01
UBR7-203ENST00000553857 CARD14Q9BXL6 1004 aa8.74□□□□□ -1.01
UBR7-203ENST00000553857 SCARF1Q14162 830 aa8.73□□□□□ -1.01
UBR7-203ENST00000553857 RSPH6AQ9H0K4 717 aa8.73□□□□□ -1.01
UBR7-203ENST00000553857 KDM4CQ9H3R0 1056 aa8.73□□□□□ -1.01
UBR7-203ENST00000553857 INSM1Q01101 510 aaPredicted RBP8.72□□□□□ -1.01
UBR7-203ENST00000553857 SLC16A10Q8TF71 515 aa8.72□□□□□ -1.01
UBR7-203ENST00000553857 SKIV2LQ15477 1246 aaKnown RBP8.71□□□□□ -1.02
UBR7-203ENST00000553857 ERFEQ4G0M1 354 aa8.71□□□□□ -1.02
UBR7-203ENST00000553857 NBPF14Q5TI25 921 aa8.71□□□□□ -1.02
UBR7-203ENST00000553857 VASH1Q7L8A9 365 aaPredicted RBP8.71□□□□□ -1.02
UBR7-203ENST00000553857 TRMT44Q8IYL2 757 aaKnown RBP8.71□□□□□ -1.02
UBR7-203ENST00000553857 ARMC2Q8NEN0 867 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms