RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 PUS7Q96PZ0 661 aaKnown RBP8.88□□□□□ -0.99
LINC-ROR-201ENST00000553704 BRPF3Q9ULD4 1205 aa8.88□□□□□ -0.99
LINC-ROR-201ENST00000553704 ZFYVE9O95405 1425 aa8.88□□□□□ -0.99
LINC-ROR-201ENST00000553704 YTHDC2Q9H6S0 1430 aaKnown RBP8.87□□□□□ -0.99
LINC-ROR-201ENST00000553704 EXOSC9Q06265 439 aaKnown RBP8.87□□□□□ -0.99
LINC-ROR-201ENST00000553704 TMPOP42166 694 aaKnown RBP8.87□□□□□ -0.99
LINC-ROR-201ENST00000553704 PRAM1Q96QH2 718 aa8.87□□□□□ -0.99
LINC-ROR-201ENST00000553704 ALKQ9UM73 1620 aa8.87□□□□□ -0.99
LINC-ROR-201ENST00000553704 FYB1O15117 783 aa8.86□□□□□ -0.99
LINC-ROR-201ENST00000553704 SETD1AO15047 1707 aaKnown RBP8.86□□□□□ -0.99
LINC-ROR-201ENST00000553704 TRIM27P14373 513 aa8.86□□□□□ -0.99
LINC-ROR-201ENST00000553704 ZKSCAN2Q63HK3 967 aa8.86□□□□□ -0.99
LINC-ROR-201ENST00000553704 SSH1Q8WYL5 1049 aa8.86□□□□□ -0.99
LINC-ROR-201ENST00000553704 SMC4Q9NTJ3 1288 aa8.86□□□□□ -0.99
LINC-ROR-201ENST00000553704 MED14O60244 1454 aa8.86□□□□□ -0.99
LINC-ROR-201ENST00000553704 ARHGEF40Q8TER5 1519 aa8.86□□□□□ -0.99
LINC-ROR-201ENST00000553704 CDC42BPGQ6DT37 1551 aa8.85□□□□□ -0.99
LINC-ROR-201ENST00000553704 DZIP1LQ8IYY4 767 aaKnown RBP8.85□□□□□ -0.99
LINC-ROR-201ENST00000553704 SLKQ9H2G2 1235 aaPredicted RBP8.85□□□□□ -0.99
LINC-ROR-201ENST00000553704 RIMBP3CA6NJZ7 1639 aa8.85□□□□□ -0.99
LINC-ROR-201ENST00000553704 RIMBP3BA6NNM3 1639 aa8.85□□□□□ -0.99
LINC-ROR-201ENST00000553704 RIMBP3Q9UFD9 1639 aa8.85□□□□□ -0.99
LINC-ROR-201ENST00000553704 ATAD2Q6PL18 1390 aa8.85□□□□□ -0.99
LINC-ROR-201ENST00000553704 FBLN1P23142 703 aa8.85□□□□□ -0.99
LINC-ROR-201ENST00000553704 FBXO31Q5XUX0 539 aaPredicted RBP8.85□□□□□ -0.99
LINC-ROR-201ENST00000553704 FTSJ3Q8IY81 847 aaKnown RBP8.85□□□□□ -0.99
LINC-ROR-201ENST00000553704 ZMYM3Q14202 1370 aa8.85□□□□□ -0.99
LINC-ROR-201ENST00000553704 OSCARQ8IYS5 282 aa8.84□□□□□ -0.99
LINC-ROR-201ENST00000553704 TBC1D32Q96NH3 1257 aa8.84□□□□□ -0.99
LINC-ROR-201ENST00000553704 AAMPQ13685 434 aa8.84□□□□□ -0.99
LINC-ROR-201ENST00000553704 RWDD1Q9H446 243 aaPredicted RBP8.84□□□□□ -0.99
LINC-ROR-201ENST00000553704 ITPRIPQ8IWB1 547 aa8.83□□□□□ -1
LINC-ROR-201ENST00000553704 ANTXR1Q9H6X2 564 aa8.83□□□□□ -1
LINC-ROR-201ENST00000553704 SLC52A1Q9NWF4 448 aa8.83□□□□□ -1
LINC-ROR-201ENST00000553704 NOB1Q9ULX3 412 aaKnown RBP8.83□□□□□ -1
LINC-ROR-201ENST00000553704 MAP2P11137 1827 aaKnown RBP8.83□□□□□ -1
LINC-ROR-201ENST00000553704 PNPLA6Q8IY17 1366 aa8.83□□□□□ -1
LINC-ROR-201ENST00000553704 FAM135BQ49AJ0 1406 aa8.83□□□□□ -1
LINC-ROR-201ENST00000553704 TMEM57Q8N5G2 664 aa8.83□□□□□ -1
LINC-ROR-201ENST00000553704 TBC1D2Q9BYX2 928 aa8.83□□□□□ -1
LINC-ROR-201ENST00000553704 POGKQ9P215 609 aa8.83□□□□□ -1
LINC-ROR-201ENST00000553704 RIPK4P57078 832 aa8.82□□□□□ -1
LINC-ROR-201ENST00000553704 ATF7IPQ6VMQ6 1270 aa8.82□□□□□ -1
LINC-ROR-201ENST00000553704 TERF2IPQ9NYB0 399 aa8.82□□□□□ -1
LINC-ROR-201ENST00000553704 CABP1Q9NZU7 370 aa8.82□□□□□ -1
LINC-ROR-201ENST00000553704 CT47B1P0C2W7 299 aaPredicted RBP8.82□□□□□ -1
LINC-ROR-201ENST00000553704 CDK19Q9BWU1 502 aa8.82□□□□□ -1
LINC-ROR-201ENST00000553704 DLG5Q8TDM6 1919 aa8.81□□□□□ -1
LINC-ROR-201ENST00000553704 NRXN3Q9Y4C0 1643 aa8.81□□□□□ -1
LINC-ROR-201ENST00000553704 DIAPH1O60610 1272 aaKnown RBP8.81□□□□□ -1
LINC-ROR-201ENST00000553704 HDAC1Q13547 482 aaPredicted RBP8.81□□□□□ -1
LINC-ROR-201ENST00000553704 BECN1Q14457 450 aa8.81□□□□□ -1
LINC-ROR-201ENST00000553704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.81□□□□□ -1
LINC-ROR-201ENST00000553704 IL16Q14005 1332 aa8.81□□□□□ -1
LINC-ROR-201ENST00000553704 TSPOAP1O95153 1857 aa8.8□□□□□ -1
LINC-ROR-201ENST00000553704 SPRYD3Q8NCJ5 442 aa8.8□□□□□ -1
LINC-ROR-201ENST00000553704 THUMPD2Q9BTF0 503 aaKnown RBP8.8□□□□□ -1
LINC-ROR-201ENST00000553704 PRKAR2BP31323 418 aa8.8□□□□□ -1
LINC-ROR-201ENST00000553704 MFAP1P55081 439 aaKnown RBP8.8□□□□□ -1
LINC-ROR-201ENST00000553704 WAPLQ7Z5K2 1190 aa8.8□□□□□ -1
LINC-ROR-201ENST00000553704 RSPH6AQ9H0K4 717 aa8.8□□□□□ -1
LINC-ROR-201ENST00000553704 UPF2Q9HAU5 1272 aaKnown RBP8.8□□□□□ -1
LINC-ROR-201ENST00000553704 DDX19BQ9UMR2 479 aa8.8□□□□□ -1
LINC-ROR-201ENST00000553704 DLC1Q96QB1 1528 aa8.79□□□□□ -1
LINC-ROR-201ENST00000553704 A2ML1A8K2U0 1454 aa8.79□□□□□ -1
LINC-ROR-201ENST00000553704 ATP7BP35670 1465 aa8.79□□□□□ -1
LINC-ROR-201ENST00000553704 HDGFL2Q7Z4V5 671 aaPredicted RBP8.79□□□□□ -1
LINC-ROR-201ENST00000553704 SMC5Q8IY18 1101 aa8.79□□□□□ -1
LINC-ROR-201ENST00000553704 PHACTR3Q96KR7 559 aa8.79□□□□□ -1
LINC-ROR-201ENST00000553704 ZBTB40Q9NUA8 1239 aa8.79□□□□□ -1
LINC-ROR-201ENST00000553704 HMOX1P09601 288 aa8.79□□□□□ -1
LINC-ROR-201ENST00000553704 POLKQ9UBT6 870 aa8.79□□□□□ -1
LINC-ROR-201ENST00000553704 KIF16BQ96L93 1317 aa8.78□□□□□ -1
LINC-ROR-201ENST00000553704 ZRANB1Q9UGI0 708 aa8.78□□□□□ -1
LINC-ROR-201ENST00000553704 MON2Q7Z3U7 1717 aa8.78□□□□□ -1
LINC-ROR-201ENST00000553704 KNDC1Q76NI1 1749 aa8.78□□□□□ -1
LINC-ROR-201ENST00000553704 C22orf23Q9BZE7 217 aa8.78□□□□□ -1
LINC-ROR-201ENST00000553704 EMILIN1Q9Y6C2 1016 aa8.78□□□□□ -1
LINC-ROR-201ENST00000553704 SPATA31D1Q6ZQQ2 1576 aa8.78□□□□□ -1
LINC-ROR-201ENST00000553704 CPS1P31327 1500 aa8.78□□□□□ -1
LINC-ROR-201ENST00000553704 PPIP5K1Q6PFW1 1433 aa8.77□□□□□ -1
LINC-ROR-201ENST00000553704 DIP2BQ9P265 1576 aa8.77□□□□□ -1.01
LINC-ROR-201ENST00000553704 C1orf115Q9H7X2 142 aa8.77□□□□□ -1.01
LINC-ROR-201ENST00000553704 TSPYL6Q8N831 410 aa8.77□□□□□ -1.01
LINC-ROR-201ENST00000553704 LNPKQ9C0E8 428 aa8.77□□□□□ -1.01
LINC-ROR-201ENST00000553704 RIMS2Q9UQ26 1411 aa8.77□□□□□ -1.01
LINC-ROR-201ENST00000553704 NCKAP5LQ9HCH0 1330 aa8.76□□□□□ -1.01
LINC-ROR-201ENST00000553704 CDK12Q9NYV4 1490 aaPredicted RBP8.76□□□□□ -1.01
LINC-ROR-201ENST00000553704 NME9Q86XW9 330 aa8.76□□□□□ -1.01
LINC-ROR-201ENST00000553704 ANO8Q9HCE9 1232 aaPredicted RBP8.76□□□□□ -1.01
LINC-ROR-201ENST00000553704 PTCH1Q13635 1447 aa8.76□□□□□ -1.01
LINC-ROR-201ENST00000553704 C3P01024 1663 aa8.76□□□□□ -1.01
LINC-ROR-201ENST00000553704 FCHSD2O94868 740 aa8.76□□□□□ -1.01
LINC-ROR-201ENST00000553704 STAG3Q9UJ98 1225 aa8.76□□□□□ -1.01
LINC-ROR-201ENST00000553704 AKAP12Q02952 1782 aa8.76□□□□□ -1.01
LINC-ROR-201ENST00000553704 CPSF1Q10570 1443 aaKnown RBP8.76□□□□□ -1.01
LINC-ROR-201ENST00000553704 REREQ9P2R6 1566 aa8.76□□□□□ -1.01
LINC-ROR-201ENST00000553704 ITSN1Q15811 1721 aa8.76□□□□□ -1.01
LINC-ROR-201ENST00000553704 NUCB1Q02818 461 aa8.75□□□□□ -1.01
LINC-ROR-201ENST00000553704 NFE2L2Q16236 605 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms