RNA–Protein interactions for RNA: ENST00000553509.1

ATL1-203, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-203ENST00000553509 USP6P35125 1406 aa18.58■□□□□ 0.57
ATL1-203ENST00000553509 ABCA3Q99758 1704 aa18.58■□□□□ 0.57
ATL1-203ENST00000553509 ADRA2BP18089 450 aa18.58■□□□□ 0.56
ATL1-203ENST00000553509 PAK3O75914 559 aaPredicted RBP18.57■□□□□ 0.56
ATL1-203ENST00000553509 LMOD2Q6P5Q4 547 aa18.57■□□□□ 0.56
ATL1-203ENST00000553509 TMC1Q8TDI8 760 aa18.57■□□□□ 0.56
ATL1-203ENST00000553509 CPSF1Q10570 1443 aaKnown RBP18.57■□□□□ 0.56
ATL1-203ENST00000553509 NRKQ7Z2Y5 1582 aa18.56■□□□□ 0.56
ATL1-203ENST00000553509 ZEB1P37275 1124 aaPredicted RBP18.56■□□□□ 0.56
ATL1-203ENST00000553509 HDGFL2Q7Z4V5 671 aaPredicted RBP18.56■□□□□ 0.56
ATL1-203ENST00000553509 TERF2IPQ9NYB0 399 aa18.56■□□□□ 0.56
ATL1-203ENST00000553509 MYOM1P52179 1685 aa18.56■□□□□ 0.56
ATL1-203ENST00000553509 LRP6O75581 1613 aa18.55■□□□□ 0.56
ATL1-203ENST00000553509 KTN1Q86UP2 1357 aaKnown RBP18.55■□□□□ 0.56
ATL1-203ENST00000553509 NUTM2BA6NNL0 878 aaPredicted RBP18.54■□□□□ 0.56
ATL1-203ENST00000553509 NUTM2EB1AL46 878 aaPredicted RBP18.54■□□□□ 0.56
ATL1-203ENST00000553509 MEX3CQ5U5Q3 659 aaKnown RBP18.54■□□□□ 0.56
ATL1-203ENST00000553509 NUTM2AQ8IVF1 878 aaPredicted RBP18.54■□□□□ 0.56
ATL1-203ENST00000553509 CRYBG1Q9Y4K1 1723 aa18.54■□□□□ 0.56
ATL1-203ENST00000553509 HAP1P54257 671 aaPredicted RBP18.52■□□□□ 0.56
ATL1-203ENST00000553509 SLC12A5Q9H2X9 1139 aa18.52■□□□□ 0.56
ATL1-203ENST00000553509 PHRF1Q9P1Y6 1649 aaKnown RBP18.52■□□□□ 0.55
ATL1-203ENST00000553509 CD163L1Q9NR16 1453 aa18.52■□□□□ 0.55
ATL1-203ENST00000553509 TTC21AQ8NDW8 1320 aa18.51■□□□□ 0.55
ATL1-203ENST00000553509 EDC4Q6P2E9 1401 aaKnown RBP18.51■□□□□ 0.55
ATL1-203ENST00000553509 ANKRD36BQ8N2N9 1353 aa18.51■□□□□ 0.55
ATL1-203ENST00000553509 PIK3C2AO00443 1686 aa18.5■□□□□ 0.55
ATL1-203ENST00000553509 SSH2Q76I76 1423 aa18.5■□□□□ 0.55
ATL1-203ENST00000553509 ABTB2Q8N961 1025 aa18.5■□□□□ 0.55
ATL1-203ENST00000553509 A0A1W2PP64 1363 aa18.5■□□□□ 0.55
ATL1-203ENST00000553509 TTC21BQ7Z4L5 1316 aa18.49■□□□□ 0.55
ATL1-203ENST00000553509 USP54Q70EL1 1684 aa18.48■□□□□ 0.55
ATL1-203ENST00000553509 NLRP13Q86W25 1043 aa18.48■□□□□ 0.55
ATL1-203ENST00000553509 ADAMTS2O95450 1211 aa18.46■□□□□ 0.55
ATL1-203ENST00000553509 POLR3GLQ9BT43 218 aa18.46■□□□□ 0.55
ATL1-203ENST00000553509 KIF20BQ96Q89 1820 aa18.45■□□□□ 0.54
ATL1-203ENST00000553509 NWD2Q9ULI1 1742 aa18.44■□□□□ 0.54
ATL1-203ENST00000553509 CABLES1Q8TDN4 633 aa18.44■□□□□ 0.54
ATL1-203ENST00000553509 USP19O94966 1318 aa18.44■□□□□ 0.54
ATL1-203ENST00000553509 COL14A1Q05707 1796 aaKnown RBP18.43■□□□□ 0.54
ATL1-203ENST00000553509 PLEKHG5O94827 1062 aa18.43■□□□□ 0.54
ATL1-203ENST00000553509 NLRP6P59044 892 aa18.43■□□□□ 0.54
ATL1-203ENST00000553509 NUTM2GQ5VZR2 741 aa18.43■□□□□ 0.54
ATL1-203ENST00000553509 NGLY1Q96IV0 654 aa18.43■□□□□ 0.54
ATL1-203ENST00000553509 C8orf37Q96NL8 207 aa18.43■□□□□ 0.54
ATL1-203ENST00000553509 PLCH1Q4KWH8 1693 aa18.43■□□□□ 0.54
ATL1-203ENST00000553509 SLIT3O75094 1523 aa18.43■□□□□ 0.54
ATL1-203ENST00000553509 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.43■□□□□ 0.54
ATL1-203ENST00000553509 ZNF772Q68DY9 489 aaPredicted RBP18.42■□□□□ 0.54
ATL1-203ENST00000553509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.42■□□□□ 0.54
ATL1-203ENST00000553509 USP31Q70CQ4 1352 aa18.41■□□□□ 0.54
ATL1-203ENST00000553509 AFF2P51816 1311 aa18.4■□□□□ 0.54
ATL1-203ENST00000553509 KIF7Q2M1P5 1343 aa18.4■□□□□ 0.54
ATL1-203ENST00000553509 KCNH5Q8NCM2 988 aa18.39■□□□□ 0.53
ATL1-203ENST00000553509 CCDC7Q96M83 1385 aa18.38■□□□□ 0.53
ATL1-203ENST00000553509 NSD3Q9BZ95 1437 aa18.38■□□□□ 0.53
ATL1-203ENST00000553509 C11orf95C9JLR9 678 aaPredicted RBP18.37■□□□□ 0.53
ATL1-203ENST00000553509 GCP02774 474 aa18.37■□□□□ 0.53
ATL1-203ENST00000553509 NME9Q86XW9 330 aa18.37■□□□□ 0.53
ATL1-203ENST00000553509 FNBP4Q8N3X1 1017 aaPredicted RBP18.37■□□□□ 0.53
ATL1-203ENST00000553509 PRDM11Q9NQV5 511 aa18.37■□□□□ 0.53
ATL1-203ENST00000553509 CPDO75976 1380 aa18.37■□□□□ 0.53
ATL1-203ENST00000553509 SLIT2O94813 1529 aa18.37■□□□□ 0.53
ATL1-203ENST00000553509 OVOS2A0A0J9YW53 1432 aa18.36■□□□□ 0.53
ATL1-203ENST00000553509 OVOS2Q6IE36 1432 aa18.36■□□□□ 0.53
ATL1-203ENST00000553509 KIAA0232Q92628 1395 aa18.36■□□□□ 0.53
ATL1-203ENST00000553509 ANKRD26Q9UPS8 1709 aa18.36■□□□□ 0.53
ATL1-203ENST00000553509 LTN1O94822 1766 aa18.35■□□□□ 0.53
ATL1-203ENST00000553509 NRAPQ86VF7 1730 aa18.35■□□□□ 0.53
ATL1-203ENST00000553509 CGNL1Q0VF96 1302 aa18.35■□□□□ 0.53
ATL1-203ENST00000553509 USP21Q9UK80 565 aa18.35■□□□□ 0.53
ATL1-203ENST00000553509 NFAT5O94916 1531 aa18.34■□□□□ 0.53
ATL1-203ENST00000553509 COG3Q96JB2 828 aa18.34■□□□□ 0.53
ATL1-203ENST00000553509 ABCC6O95255 1503 aa18.33■□□□□ 0.53
ATL1-203ENST00000553509 ZC3H6P61129 1189 aaKnown RBP18.33■□□□□ 0.52
ATL1-203ENST00000553509 PANK3Q9H999 370 aa18.33■□□□□ 0.52
ATL1-203ENST00000553509 RGS17Q9UGC6 210 aaPredicted RBP18.33■□□□□ 0.52
ATL1-203ENST00000553509 LMO7Q8WWI1 1683 aa18.33■□□□□ 0.52
ATL1-203ENST00000553509 WASHC2AQ641Q2 1341 aa18.32■□□□□ 0.52
ATL1-203ENST00000553509 FAM83GA6ND36 823 aa18.32■□□□□ 0.52
ATL1-203ENST00000553509 CARD14Q9BXL6 1004 aa18.32■□□□□ 0.52
ATL1-203ENST00000553509 TRPC5Q9UL62 973 aaPredicted RBP18.32■□□□□ 0.52
ATL1-203ENST00000553509 BCL9LQ86UU0 1499 aa18.32■□□□□ 0.52
ATL1-203ENST00000553509 FYB1O15117 783 aa18.31■□□□□ 0.52
ATL1-203ENST00000553509 UNC5CLQ8IV45 518 aa18.31■□□□□ 0.52
ATL1-203ENST00000553509 NSD2O96028 1365 aa18.3■□□□□ 0.52
ATL1-203ENST00000553509 ZRANB1Q9UGI0 708 aa18.3■□□□□ 0.52
ATL1-203ENST00000553509 ATRNO75882 1429 aa18.3■□□□□ 0.52
ATL1-203ENST00000553509 COL18A1P39060 1754 aa18.3■□□□□ 0.52
ATL1-203ENST00000553509 AATKQ6ZMQ8 1374 aa18.3■□□□□ 0.52
ATL1-203ENST00000553509 QTRT2Q9H974 415 aaKnown RBP18.29■□□□□ 0.52
ATL1-203ENST00000553509 BTG4Q9NY30 223 aa18.29■□□□□ 0.52
ATL1-203ENST00000553509 KNSTRNQ9Y448 316 aa18.29■□□□□ 0.52
ATL1-203ENST00000553509 RGPD5Q99666 1765 aa18.29■□□□□ 0.52
ATL1-203ENST00000553509 SOX12O15370 315 aa18.28■□□□□ 0.52
ATL1-203ENST00000553509 CHRNA2Q15822 529 aa18.28■□□□□ 0.52
ATL1-203ENST00000553509 POTEAQ6S8J7 498 aa18.28■□□□□ 0.52
ATL1-203ENST00000553509 GGNBP2Q9H3C7 697 aa18.28■□□□□ 0.52
ATL1-203ENST00000553509 ZBTB7CA1YPR0 619 aa18.27■□□□□ 0.52
ATL1-203ENST00000553509 ARHGEF25Q86VW2 580 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms