RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 DIAPH1O60610 1272 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-203ENST00000553391 NME9Q86XW9 330 aa12.33□□□□□ -0.44
MTHFD1-203ENST00000553391 TSHZ2Q9NRE2 1034 aa12.33□□□□□ -0.44
MTHFD1-203ENST00000553391 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
MTHFD1-203ENST00000553391 DMRT2Q9Y5R5 561 aa12.33□□□□□ -0.44
MTHFD1-203ENST00000553391 CDC42BPGQ6DT37 1551 aa12.32□□□□□ -0.44
MTHFD1-203ENST00000553391 ACEP12821 1306 aa12.32□□□□□ -0.44
MTHFD1-203ENST00000553391 TTC21BQ7Z4L5 1316 aa12.32□□□□□ -0.44
MTHFD1-203ENST00000553391 AATKQ6ZMQ8 1374 aa12.31□□□□□ -0.44
MTHFD1-203ENST00000553391 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.31□□□□□ -0.44
MTHFD1-203ENST00000553391 FBLN1P23142 703 aa12.31□□□□□ -0.44
MTHFD1-203ENST00000553391 B4GALNT3Q6L9W6 998 aa12.31□□□□□ -0.44
MTHFD1-203ENST00000553391 PNNQ9H307 717 aaKnown RBP12.31□□□□□ -0.44
MTHFD1-203ENST00000553391 COL3A1P02461 1466 aaPredicted RBP12.31□□□□□ -0.44
MTHFD1-203ENST00000553391 ADAMTSL3P82987 1691 aa12.31□□□□□ -0.44
MTHFD1-203ENST00000553391 PTCH1Q13635 1447 aa12.3□□□□□ -0.44
MTHFD1-203ENST00000553391 SHPRHQ149N8 1683 aa12.3□□□□□ -0.44
MTHFD1-203ENST00000553391 FCHSD2O94868 740 aa12.3□□□□□ -0.44
MTHFD1-203ENST00000553391 KCNA6P17658 529 aa12.3□□□□□ -0.44
MTHFD1-203ENST00000553391 EXOC6Q8TAG9 804 aa12.3□□□□□ -0.44
MTHFD1-203ENST00000553391 COG3Q96JB2 828 aa12.3□□□□□ -0.44
MTHFD1-203ENST00000553391 IL13P35225 146 aa12.29□□□□□ -0.44
MTHFD1-203ENST00000553391 ADGRB2O60241 1585 aa12.29□□□□□ -0.44
MTHFD1-203ENST00000553391 DIP2AQ14689 1571 aa12.29□□□□□ -0.44
MTHFD1-203ENST00000553391 SSH2Q76I76 1423 aa12.28□□□□□ -0.44
MTHFD1-203ENST00000553391 U2SURPO15042 1029 aaKnown RBP12.28□□□□□ -0.44
MTHFD1-203ENST00000553391 TMPOP42166 694 aaKnown RBP12.28□□□□□ -0.44
MTHFD1-203ENST00000553391 RRP7AQ9Y3A4 280 aaKnown RBP12.28□□□□□ -0.44
MTHFD1-203ENST00000553391 CEP170BQ9Y4F5 1589 aaPredicted RBP12.27□□□□□ -0.44
MTHFD1-203ENST00000553391 SETD1BQ9UPS6 1966 aaKnown RBP12.27□□□□□ -0.44
MTHFD1-203ENST00000553391 PLIN1O60240 522 aa12.27□□□□□ -0.45
MTHFD1-203ENST00000553391 NEUROD2Q15784 382 aa12.27□□□□□ -0.45
MTHFD1-203ENST00000553391 TRIM35Q9UPQ4 493 aa12.27□□□□□ -0.45
MTHFD1-203ENST00000553391 RIMS1Q86UR5 1692 aaKnown RBP12.26□□□□□ -0.45
MTHFD1-203ENST00000553391 NUTM2FA1L443 756 aa12.26□□□□□ -0.45
MTHFD1-203ENST00000553391 EMILIN1Q9Y6C2 1016 aa12.26□□□□□ -0.45
MTHFD1-203ENST00000553391 IQSEC2Q5JU85 1478 aa12.26□□□□□ -0.45
MTHFD1-203ENST00000553391 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
MTHFD1-203ENST00000553391 CCDC136Q96JN2 1154 aa12.25□□□□□ -0.45
MTHFD1-203ENST00000553391 RSPH6AQ9H0K4 717 aa12.25□□□□□ -0.45
MTHFD1-203ENST00000553391 TTC21AQ8NDW8 1320 aa12.25□□□□□ -0.45
MTHFD1-203ENST00000553391 NKTRP30414 1462 aaKnown RBP12.24□□□□□ -0.45
MTHFD1-203ENST00000553391 USP6P35125 1406 aa12.24□□□□□ -0.45
MTHFD1-203ENST00000553391 IL16Q14005 1332 aa12.24□□□□□ -0.45
MTHFD1-203ENST00000553391 USP31Q70CQ4 1352 aa12.24□□□□□ -0.45
MTHFD1-203ENST00000553391 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-203ENST00000553391 PMFBP1Q8TBY8 1022 aa12.24□□□□□ -0.45
MTHFD1-203ENST00000553391 CRBNQ96SW2 442 aa12.24□□□□□ -0.45
MTHFD1-203ENST00000553391 ANKARQ7Z5J8 1434 aa12.23□□□□□ -0.45
MTHFD1-203ENST00000553391 PPM1GO15355 546 aaPredicted RBP12.23□□□□□ -0.45
MTHFD1-203ENST00000553391 RIPK4P57078 832 aa12.23□□□□□ -0.45
MTHFD1-203ENST00000553391 NGDNQ8NEJ9 315 aaKnown RBP12.23□□□□□ -0.45
MTHFD1-203ENST00000553391 BCAR3O75815 825 aa12.22□□□□□ -0.45
MTHFD1-203ENST00000553391 RRS1Q15050 365 aaKnown RBP12.22□□□□□ -0.45
MTHFD1-203ENST00000553391 C20orf194Q5TEA3 1177 aa12.22□□□□□ -0.45
MTHFD1-203ENST00000553391 MYH16Q9H6N6 1097 aa12.22□□□□□ -0.45
MTHFD1-203ENST00000553391 XRN1Q8IZH2 1706 aaKnown RBP12.22□□□□□ -0.45
MTHFD1-203ENST00000553391 KIF20BQ96Q89 1820 aa12.21□□□□□ -0.45
MTHFD1-203ENST00000553391 MAPK8IP3Q9UPT6 1336 aa12.21□□□□□ -0.45
MTHFD1-203ENST00000553391 MON2Q7Z3U7 1717 aa12.21□□□□□ -0.45
MTHFD1-203ENST00000553391 PRKAR2BP31323 418 aa12.21□□□□□ -0.45
MTHFD1-203ENST00000553391 PHACTR3Q96KR7 559 aa12.21□□□□□ -0.45
MTHFD1-203ENST00000553391 NPHP4O75161 1426 aaPredicted RBP12.2□□□□□ -0.46
MTHFD1-203ENST00000553391 AKAP12Q02952 1782 aa12.2□□□□□ -0.46
MTHFD1-203ENST00000553391 CT47B1P0C2W7 299 aaPredicted RBP12.2□□□□□ -0.46
MTHFD1-203ENST00000553391 RARSP54136 660 aaKnown RBP12.2□□□□□ -0.46
MTHFD1-203ENST00000553391 NFE2L2Q16236 605 aa12.2□□□□□ -0.46
MTHFD1-203ENST00000553391 OVOS2A0A0J9YW53 1432 aa12.2□□□□□ -0.46
MTHFD1-203ENST00000553391 OVOS2Q6IE36 1432 aa12.2□□□□□ -0.46
MTHFD1-203ENST00000553391 EIF4A2Q14240 407 aaKnown RBP12.19□□□□□ -0.46
MTHFD1-203ENST00000553391 PDE3AQ14432 1141 aa12.19□□□□□ -0.46
MTHFD1-203ENST00000553391 PHF8Q9UPP1 1060 aa12.19□□□□□ -0.46
MTHFD1-203ENST00000553391 CDK12Q9NYV4 1490 aaPredicted RBP12.19□□□□□ -0.46
MTHFD1-203ENST00000553391 TOPAZ1Q8N9V7 1692 aa12.19□□□□□ -0.46
MTHFD1-203ENST00000553391 HMOX1P09601 288 aa12.18□□□□□ -0.46
MTHFD1-203ENST00000553391 ZNF142P52746 1687 aaPredicted RBP12.18□□□□□ -0.46
MTHFD1-203ENST00000553391 CHD2O14647 1828 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-203ENST00000553391 MAP2P11137 1827 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-203ENST00000553391 NEFMP07197 916 aa12.16□□□□□ -0.46
MTHFD1-203ENST00000553391 EXOSC9Q06265 439 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-203ENST00000553391 HSP90AB2PQ58FF8 381 aa12.16□□□□□ -0.46
MTHFD1-203ENST00000553391 RBM19Q9Y4C8 960 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-203ENST00000553391 ZNF853P0CG23 659 aa12.15□□□□□ -0.46
MTHFD1-203ENST00000553391 NLRP6P59044 892 aa12.15□□□□□ -0.46
MTHFD1-203ENST00000553391 RBM33Q96EV2 1170 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-203ENST00000553391 MAP3K19Q56UN5 1328 aa12.14□□□□□ -0.47
MTHFD1-203ENST00000553391 FANCIQ9NVI1 1328 aa12.14□□□□□ -0.47
MTHFD1-203ENST00000553391 PROSER2Q86WR7 435 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-203ENST00000553391 ITSN1Q15811 1721 aa12.14□□□□□ -0.47
MTHFD1-203ENST00000553391 NRKQ7Z2Y5 1582 aa12.13□□□□□ -0.47
MTHFD1-203ENST00000553391 CALD1Q05682 793 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-203ENST00000553391 SULT6B1Q6IMI4 303 aa12.13□□□□□ -0.47
MTHFD1-203ENST00000553391 TSR2Q969E8 191 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-203ENST00000553391 ADGRL3Q9HAR2 1447 aa12.12□□□□□ -0.47
MTHFD1-203ENST00000553391 ABTB2Q8N961 1025 aa12.12□□□□□ -0.47
MTHFD1-203ENST00000553391 SBNO1A3KN83 1393 aa12.12□□□□□ -0.47
MTHFD1-203ENST00000553391 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
MTHFD1-203ENST00000553391 KIF24Q5T7B8 1368 aa12.11□□□□□ -0.47
MTHFD1-203ENST00000553391 AMPHP49418 695 aa12.11□□□□□ -0.47
MTHFD1-203ENST00000553391 BRPF1P55201 1214 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms