RNA–Protein interactions for RNA: ENST00000552555.1

DDX23-215, Transcript of DEAD-box helicase 23, human

TSL 4

Gene DDX23, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-215	ENST00000552555	NKTR	P30414	1462 aa	Known RBP	13.63	□□□□□ -0.23
DDX23-215	ENST00000552555	CHD2	O14647	1828 aa	Known RBP	13.63	□□□□□ -0.23
DDX23-215	ENST00000552555	TNNT2	P45379	298 aa	Predicted RBP	13.63	□□□□□ -0.23
DDX23-215	ENST00000552555	RUNDC1	Q96C34	613 aa		13.63	□□□□□ -0.23
DDX23-215	ENST00000552555	NCKAP5L	Q9HCH0	1330 aa		13.63	□□□□□ -0.23
DDX23-215	ENST00000552555	NWD1	Q149M9	1564 aa		13.62	□□□□□ -0.23
DDX23-215	ENST00000552555	CCDC27	Q2M243	656 aa		13.62	□□□□□ -0.23
DDX23-215	ENST00000552555	ACE	P12821	1306 aa		13.62	□□□□□ -0.23
DDX23-215	ENST00000552555	TTC21B	Q7Z4L5	1316 aa		13.62	□□□□□ -0.23
DDX23-215	ENST00000552555	APAF1	O14727	1248 aa		13.61	□□□□□ -0.23
DDX23-215	ENST00000552555	CDCA7L	Q96GN5	454 aa		13.61	□□□□□ -0.23
DDX23-215	ENST00000552555	POLK	Q9UBT6	870 aa		13.61	□□□□□ -0.23
DDX23-215	ENST00000552555	OVOS2	A0A0J9YW53	1432 aa		13.61	□□□□□ -0.23
DDX23-215	ENST00000552555	OVOS2	Q6IE36	1432 aa		13.61	□□□□□ -0.23
DDX23-215	ENST00000552555	ITSN1	Q15811	1721 aa		13.61	□□□□□ -0.23
DDX23-215	ENST00000552555	TTC21A	Q8NDW8	1320 aa		13.61	□□□□□ -0.23
DDX23-215	ENST00000552555	USP31	Q70CQ4	1352 aa		13.6	□□□□□ -0.23
DDX23-215	ENST00000552555	GOLGA2	Q08379	1002 aa		13.6	□□□□□ -0.23
DDX23-215	ENST00000552555	SLFN5	Q08AF3	891 aa		13.6	□□□□□ -0.23
DDX23-215	ENST00000552555	DUSP27	Q5VZP5	1158 aa		13.6	□□□□□ -0.23
DDX23-215	ENST00000552555	NME9	Q86XW9	330 aa		13.6	□□□□□ -0.23
DDX23-215	ENST00000552555	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
DDX23-215	ENST00000552555	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX23-215	ENST00000552555	FMN2	Q9NZ56	1722 aa		13.59	□□□□□ -0.23
DDX23-215	ENST00000552555	ADGRL3	Q9HAR2	1447 aa		13.59	□□□□□ -0.23
DDX23-215	ENST00000552555	CCDC146	Q8IYE0	955 aa		13.59	□□□□□ -0.23
DDX23-215	ENST00000552555	PLEKHF1	Q96S99	279 aa		13.59	□□□□□ -0.23
DDX23-215	ENST00000552555	RCAN3	Q9UKA8	241 aa		13.59	□□□□□ -0.23
DDX23-215	ENST00000552555	DIAPH1	O60610	1272 aa	Known RBP	13.58	□□□□□ -0.24
DDX23-215	ENST00000552555	COG3	Q96JB2	828 aa		13.58	□□□□□ -0.24
DDX23-215	ENST00000552555	LRRC7	Q96NW7	1537 aa		13.58	□□□□□ -0.24
DDX23-215	ENST00000552555		E9PSI1	815 aa		13.57	□□□□□ -0.24
DDX23-215	ENST00000552555	WDR63	Q8IWG1	891 aa		13.57	□□□□□ -0.24
DDX23-215	ENST00000552555	SALL2	Q9Y467	1007 aa	Predicted RBP	13.57	□□□□□ -0.24
DDX23-215	ENST00000552555	SENP3-EIF4A1	A0A087X0R7	540 aa		13.56	□□□□□ -0.24
DDX23-215	ENST00000552555	WWC1	Q8IX03	1113 aa		13.56	□□□□□ -0.24
DDX23-215	ENST00000552555	TCP11L2	Q8N4U5	519 aa		13.56	□□□□□ -0.24
DDX23-215	ENST00000552555	PNN	Q9H307	717 aa	Known RBP	13.56	□□□□□ -0.24
DDX23-215	ENST00000552555	FCHSD2	O94868	740 aa		13.55	□□□□□ -0.24
DDX23-215	ENST00000552555	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.55	□□□□□ -0.24
DDX23-215	ENST00000552555	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
DDX23-215	ENST00000552555	PPP4R2	Q9NY27	417 aa		13.55	□□□□□ -0.24
DDX23-215	ENST00000552555	ZRANB1	Q9UGI0	708 aa		13.55	□□□□□ -0.24
DDX23-215	ENST00000552555	NALCN	Q8IZF0	1738 aa		13.55	□□□□□ -0.24
DDX23-215	ENST00000552555	NCOA3	Q9Y6Q9	1424 aa		13.55	□□□□□ -0.24
DDX23-215	ENST00000552555	USP54	Q70EL1	1684 aa		13.54	□□□□□ -0.24
DDX23-215	ENST00000552555	IL13	P35225	146 aa		13.54	□□□□□ -0.24
DDX23-215	ENST00000552555	RRP1	P56182	461 aa	Known RBP	13.54	□□□□□ -0.24
DDX23-215	ENST00000552555	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.52	□□□□□ -0.25
DDX23-215	ENST00000552555	KIF24	Q5T7B8	1368 aa		13.51	□□□□□ -0.25
DDX23-215	ENST00000552555	NUTM2F	A1L443	756 aa		13.51	□□□□□ -0.25
DDX23-215	ENST00000552555	NGDN	Q8NEJ9	315 aa	Known RBP	13.51	□□□□□ -0.25
DDX23-215	ENST00000552555	RSPH6A	Q9H0K4	717 aa		13.51	□□□□□ -0.25
DDX23-215	ENST00000552555	EMILIN1	Q9Y6C2	1016 aa		13.51	□□□□□ -0.25
DDX23-215	ENST00000552555	IL16	Q14005	1332 aa		13.5	□□□□□ -0.25
DDX23-215	ENST00000552555	TMPO	P42166	694 aa	Known RBP	13.5	□□□□□ -0.25
DDX23-215	ENST00000552555	PELP1	Q8IZL8	1130 aa	Known RBP	13.5	□□□□□ -0.25
DDX23-215	ENST00000552555	PMFBP1	Q8TBY8	1022 aa		13.5	□□□□□ -0.25
DDX23-215	ENST00000552555	PHF8	Q9UPP1	1060 aa		13.5	□□□□□ -0.25
DDX23-215	ENST00000552555	DMRT2	Q9Y5R5	561 aa		13.5	□□□□□ -0.25
DDX23-215	ENST00000552555	U2SURP	O15042	1029 aa	Known RBP	13.49	□□□□□ -0.25
DDX23-215	ENST00000552555	FBLN1	P23142	703 aa		13.49	□□□□□ -0.25
DDX23-215	ENST00000552555	IRX6	P78412	446 aa	Predicted RBP	13.49	□□□□□ -0.25
DDX23-215	ENST00000552555	DCC	P43146	1447 aa		13.48	□□□□□ -0.25
DDX23-215	ENST00000552555	MST1R	Q04912	1400 aa		13.47	□□□□□ -0.25
DDX23-215	ENST00000552555	PIK3C2A	O00443	1686 aa		13.47	□□□□□ -0.25
DDX23-215	ENST00000552555	RRS1	Q15050	365 aa	Known RBP	13.47	□□□□□ -0.25
DDX23-215	ENST00000552555	TRIM35	Q9UPQ4	493 aa		13.47	□□□□□ -0.25
DDX23-215	ENST00000552555	MAP2	P11137	1827 aa	Known RBP	13.47	□□□□□ -0.25
DDX23-215	ENST00000552555	SBNO1	A3KN83	1393 aa		13.46	□□□□□ -0.25
DDX23-215	ENST00000552555	MAPK8IP3	Q9UPT6	1336 aa		13.46	□□□□□ -0.25
DDX23-215	ENST00000552555	RGPD8	O14715	1765 aa	Predicted RBP	13.46	□□□□□ -0.25
DDX23-215	ENST00000552555	C19orf44	Q9H6X5	657 aa		13.46	□□□□□ -0.25
DDX23-215	ENST00000552555	LMTK3	Q96Q04	1460 aa		13.46	□□□□□ -0.25
DDX23-215	ENST00000552555	CT47B1	P0C2W7	299 aa	Predicted RBP	13.45	□□□□□ -0.26
DDX23-215	ENST00000552555	RRP7A	Q9Y3A4	280 aa	Known RBP	13.45	□□□□□ -0.26
DDX23-215	ENST00000552555	MAP3K19	Q56UN5	1328 aa		13.44	□□□□□ -0.26
DDX23-215	ENST00000552555	PPM1G	O15355	546 aa	Predicted RBP	13.44	□□□□□ -0.26
DDX23-215	ENST00000552555	PRKAR2B	P31323	418 aa		13.44	□□□□□ -0.26
DDX23-215	ENST00000552555	EIF4A2	Q14240	407 aa	Known RBP	13.44	□□□□□ -0.26
DDX23-215	ENST00000552555	PROSER2	Q86WR7	435 aa	Predicted RBP	13.44	□□□□□ -0.26
DDX23-215	ENST00000552555	MYH16	Q9H6N6	1097 aa		13.44	□□□□□ -0.26
DDX23-215	ENST00000552555	RGPD1	P0DJD0	1748 aa		13.44	□□□□□ -0.26
DDX23-215	ENST00000552555	PEAK1	Q9H792	1746 aa		13.44	□□□□□ -0.26
DDX23-215	ENST00000552555	FLT4	P35916	1363 aa		13.44	□□□□□ -0.26
DDX23-215	ENST00000552555	NFE2L2	Q16236	605 aa		13.43	□□□□□ -0.26
DDX23-215	ENST00000552555	MARF1	Q9Y4F3	1742 aa	Known RBP	13.43	□□□□□ -0.26
DDX23-215	ENST00000552555	ARHGEF10	O15013	1369 aa		13.43	□□□□□ -0.26
DDX23-215	ENST00000552555	C1orf167	Q5SNV9	1468 aa		13.42	□□□□□ -0.26
DDX23-215	ENST00000552555	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.42	□□□□□ -0.26
DDX23-215	ENST00000552555	RTL1	A6NKG5	1358 aa		13.42	□□□□□ -0.26
DDX23-215	ENST00000552555	KDR	P35968	1356 aa		13.42	□□□□□ -0.26
DDX23-215	ENST00000552555	NEFM	P07197	916 aa		13.41	□□□□□ -0.26
DDX23-215	ENST00000552555	RIPK4	P57078	832 aa		13.41	□□□□□ -0.26
DDX23-215	ENST00000552555	NLRP6	P59044	892 aa		13.41	□□□□□ -0.26
DDX23-215	ENST00000552555	NEUROD2	Q15784	382 aa		13.41	□□□□□ -0.26
DDX23-215	ENST00000552555	PHACTR3	Q96KR7	559 aa		13.41	□□□□□ -0.26
DDX23-215	ENST00000552555	TMEM94	Q12767	1356 aa		13.41	□□□□□ -0.26
DDX23-215	ENST00000552555	KIF1A	Q12756	1690 aa		13.4	□□□□□ -0.26
DDX23-215	ENST00000552555	HSP90AB2P	Q58FF8	381 aa		13.4	□□□□□ -0.26

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