RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 LMOD2Q6P5Q4 547 aa8.4□□□□□ -1.06
CCDC65-204ENST00000552188 CREBZFQ9NS37 354 aa8.4□□□□□ -1.06
CCDC65-204ENST00000552188 PHF8Q9UPP1 1060 aa8.4□□□□□ -1.06
CCDC65-204ENST00000552188 MARF1Q9Y4F3 1742 aaKnown RBP8.4□□□□□ -1.07
CCDC65-204ENST00000552188 WASLO00401 505 aaPredicted RBP8.39□□□□□ -1.07
CCDC65-204ENST00000552188 HAP1P54257 671 aaPredicted RBP8.39□□□□□ -1.07
CCDC65-204ENST00000552188 XPCQ01831 940 aaPredicted RBP8.39□□□□□ -1.07
CCDC65-204ENST00000552188 KRT28Q7Z3Y7 464 aa8.39□□□□□ -1.07
CCDC65-204ENST00000552188 NGDNQ8NEJ9 315 aaKnown RBP8.39□□□□□ -1.07
CCDC65-204ENST00000552188 PMFBP1Q8TBY8 1022 aa8.39□□□□□ -1.07
CCDC65-204ENST00000552188 USP32Q8NFA0 1604 aa8.39□□□□□ -1.07
CCDC65-204ENST00000552188 ANKARQ7Z5J8 1434 aa8.38□□□□□ -1.07
CCDC65-204ENST00000552188 SOS2Q07890 1332 aaPredicted RBP8.38□□□□□ -1.07
CCDC65-204ENST00000552188 CENPJQ9HC77 1338 aaPredicted RBP8.38□□□□□ -1.07
CCDC65-204ENST00000552188 SRPK2P78362 688 aaKnown RBP8.38□□□□□ -1.07
CCDC65-204ENST00000552188 TULP4Q9NRJ4 1543 aa8.38□□□□□ -1.07
CCDC65-204ENST00000552188 GPRASP1Q5JY77 1395 aa8.37□□□□□ -1.07
CCDC65-204ENST00000552188 PNPLA6Q8IY17 1366 aa8.37□□□□□ -1.07
CCDC65-204ENST00000552188 ADAMTS2O95450 1211 aa8.37□□□□□ -1.07
CCDC65-204ENST00000552188 ILDR2Q71H61 639 aa8.37□□□□□ -1.07
CCDC65-204ENST00000552188 CCER1Q8TC90 406 aaPredicted RBP8.37□□□□□ -1.07
CCDC65-204ENST00000552188 CDK19Q9BWU1 502 aa8.37□□□□□ -1.07
CCDC65-204ENST00000552188 CARD11Q9BXL7 1154 aa8.37□□□□□ -1.07
CCDC65-204ENST00000552188 COL22A1Q8NFW1 1626 aaPredicted RBP8.36□□□□□ -1.07
CCDC65-204ENST00000552188 PAK3O75914 559 aaPredicted RBP8.36□□□□□ -1.07
CCDC65-204ENST00000552188 ZNF772Q68DY9 489 aaPredicted RBP8.36□□□□□ -1.07
CCDC65-204ENST00000552188 NUDT16Q96DE0 195 aaKnown RBP8.36□□□□□ -1.07
CCDC65-204ENST00000552188 NGLY1Q96IV0 654 aa8.36□□□□□ -1.07
CCDC65-204ENST00000552188 C8orf37Q96NL8 207 aa8.36□□□□□ -1.07
CCDC65-204ENST00000552188 PXDNQ92626 1479 aa8.36□□□□□ -1.07
CCDC65-204ENST00000552188 LRP6O75581 1613 aa8.36□□□□□ -1.07
CCDC65-204ENST00000552188 NBPF8Q3BBV2 869 aa8.35□□□□□ -1.07
CCDC65-204ENST00000552188 EVC2Q86UK5 1308 aa8.34□□□□□ -1.07
CCDC65-204ENST00000552188 TOPAZ1Q8N9V7 1692 aa8.34□□□□□ -1.07
CCDC65-204ENST00000552188 PRKAR2AP13861 404 aaKnown RBP8.34□□□□□ -1.07
CCDC65-204ENST00000552188 TNS3Q68CZ2 1445 aa8.34□□□□□ -1.07
CCDC65-204ENST00000552188 AFF2P51816 1311 aa8.33□□□□□ -1.08
CCDC65-204ENST00000552188 SPATA31A3Q5VYP0 1347 aa8.33□□□□□ -1.08
CCDC65-204ENST00000552188 PRR36Q9H6K5 1346 aa8.33□□□□□ -1.08
CCDC65-204ENST00000552188 CLSPNQ9HAW4 1339 aa8.33□□□□□ -1.08
CCDC65-204ENST00000552188 RALGAPBQ86X10 1494 aa8.33□□□□□ -1.08
CCDC65-204ENST00000552188 SOCS7O14512 581 aa8.33□□□□□ -1.08
CCDC65-204ENST00000552188 FXR2P51116 673 aaKnown RBP eCLIP8.33□□□□□ -1.08
CCDC65-204ENST00000552188 SPOCK2Q92563 424 aa8.33□□□□□ -1.08
CCDC65-204ENST00000552188 ABCA3Q99758 1704 aa8.33□□□□□ -1.08
CCDC65-204ENST00000552188 TRPM3Q9HCF6 1732 aaPredicted RBP8.33□□□□□ -1.08
CCDC65-204ENST00000552188 CABP2Q9NPB3 220 aa8.33□□□□□ -1.08
CCDC65-204ENST00000552188 CCDC61Q9Y6R9 512 aa8.33□□□□□ -1.08
CCDC65-204ENST00000552188 SBNO1A3KN83 1393 aa8.33□□□□□ -1.08
CCDC65-204ENST00000552188 ARHGEF10O15013 1369 aa8.33□□□□□ -1.08
CCDC65-204ENST00000552188 ATP7BP35670 1465 aa8.32□□□□□ -1.08
CCDC65-204ENST00000552188 POTEAQ6S8J7 498 aa8.32□□□□□ -1.08
CCDC65-204ENST00000552188 PIP4P2Q8N4L2 257 aa8.32□□□□□ -1.08
CCDC65-204ENST00000552188 ZBTB47Q9UFB7 747 aaPredicted RBP8.32□□□□□ -1.08
CCDC65-204ENST00000552188 RGS17Q9UGC6 210 aaPredicted RBP8.32□□□□□ -1.08
CCDC65-204ENST00000552188 ALS2Q96Q42 1657 aa8.32□□□□□ -1.08
CCDC65-204ENST00000552188 ACEP12821 1306 aa8.31□□□□□ -1.08
CCDC65-204ENST00000552188 PPIP5K1Q6PFW1 1433 aa8.31□□□□□ -1.08
CCDC65-204ENST00000552188 RXRBP28702 533 aa8.31□□□□□ -1.08
CCDC65-204ENST00000552188 QTRT2Q9H974 415 aaKnown RBP8.31□□□□□ -1.08
CCDC65-204ENST00000552188 USP21Q9UK80 565 aa8.31□□□□□ -1.08
CCDC65-204ENST00000552188 TIMELESSQ9UNS1 1208 aa8.31□□□□□ -1.08
CCDC65-204ENST00000552188 AKAP12Q02952 1782 aa8.3□□□□□ -1.08
CCDC65-204ENST00000552188 MNX1P50219 401 aaPredicted RBP8.3□□□□□ -1.08
CCDC65-204ENST00000552188 CABLES1Q8TDN4 633 aa8.3□□□□□ -1.08
CCDC65-204ENST00000552188 PLCH1Q4KWH8 1693 aa8.3□□□□□ -1.08
CCDC65-204ENST00000552188 NWD2Q9ULI1 1742 aa8.29□□□□□ -1.08
CCDC65-204ENST00000552188 PLEKHG3A1L390 1219 aa8.29□□□□□ -1.08
CCDC65-204ENST00000552188 CABP1Q9NZU7 370 aa8.29□□□□□ -1.08
CCDC65-204ENST00000552188 CCDC9Q9Y3X0 531 aaKnown RBP8.29□□□□□ -1.08
CCDC65-204ENST00000552188 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.29□□□□□ -1.08
CCDC65-204ENST00000552188 PHRF1Q9P1Y6 1649 aaKnown RBP8.29□□□□□ -1.08
CCDC65-204ENST00000552188 COL14A1Q05707 1796 aaKnown RBP8.28□□□□□ -1.08
CCDC65-204ENST00000552188 ATAD2Q6PL18 1390 aa8.28□□□□□ -1.08
CCDC65-204ENST00000552188 RBM6P78332 1123 aaKnown RBP8.28□□□□□ -1.08
CCDC65-204ENST00000552188 NUTM2GQ5VZR2 741 aa8.28□□□□□ -1.08
CCDC65-204ENST00000552188 ABTB2Q8N961 1025 aa8.28□□□□□ -1.08
CCDC65-204ENST00000552188 TMC1Q8TDI8 760 aa8.28□□□□□ -1.08
CCDC65-204ENST00000552188 TRPC5Q9UL62 973 aaPredicted RBP8.28□□□□□ -1.08
CCDC65-204ENST00000552188 POLR3AO14802 1390 aaPredicted RBP8.27□□□□□ -1.09
CCDC65-204ENST00000552188 CRYBG1Q9Y4K1 1723 aa8.27□□□□□ -1.09
CCDC65-204ENST00000552188 ST20-MTHFSA0A0A6YYL1 179 aa8.27□□□□□ -1.09
CCDC65-204ENST00000552188 DAXXQ9UER7 740 aaPredicted RBP8.27□□□□□ -1.09
CCDC65-204ENST00000552188 FARP1Q9Y4F1 1045 aaPredicted RBP8.27□□□□□ -1.09
CCDC65-204ENST00000552188 MON2Q7Z3U7 1717 aa8.26□□□□□ -1.09
CCDC65-204ENST00000552188 BRD4O60885 1362 aaPredicted RBP8.26□□□□□ -1.09
CCDC65-204ENST00000552188 ZBTB7CA1YPR0 619 aa8.26□□□□□ -1.09
CCDC65-204ENST00000552188 HDGFL2Q7Z4V5 671 aaPredicted RBP8.26□□□□□ -1.09
CCDC65-204ENST00000552188 NLRP13Q86W25 1043 aa8.26□□□□□ -1.09
CCDC65-204ENST00000552188 FNBP4Q8N3X1 1017 aaPredicted RBP8.26□□□□□ -1.09
CCDC65-204ENST00000552188 KTN1Q86UP2 1357 aaKnown RBP8.25□□□□□ -1.09
CCDC65-204ENST00000552188 USP47Q96K76 1375 aa8.25□□□□□ -1.09
CCDC65-204ENST00000552188 SBNO2Q9Y2G9 1366 aa8.25□□□□□ -1.09
CCDC65-204ENST00000552188 NLRP6P59044 892 aa8.25□□□□□ -1.09
CCDC65-204ENST00000552188 ZC3H6P61129 1189 aaKnown RBP8.25□□□□□ -1.09
CCDC65-204ENST00000552188 TMF1P82094 1093 aa8.25□□□□□ -1.09
CCDC65-204ENST00000552188 UNC5CLQ8IV45 518 aa8.25□□□□□ -1.09
CCDC65-204ENST00000552188 PRDM11Q9NQV5 511 aa8.25□□□□□ -1.09
CCDC65-204ENST00000552188 CIZ1Q9ULV3 898 aaPredicted RBP8.25□□□□□ -1.09
CCDC65-204ENST00000552188 USP6P35125 1406 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms