RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 USP47Q96K76 1375 aa14.87□□□□□ -0.03
PTCH1-225ENST00000551845 SBNO2Q9Y2G9 1366 aa14.87□□□□□ -0.03
PTCH1-225ENST00000551845 BLMP54132 1417 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-225ENST00000551845 PAK3O75914 559 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-225ENST00000551845 DEFB132Q7Z7B7 95 aa14.87□□□□□ -0.03
PTCH1-225ENST00000551845 ACEP12821 1306 aa14.87□□□□□ -0.03
PTCH1-225ENST00000551845 SPATA31A3Q5VYP0 1347 aa14.87□□□□□ -0.03
PTCH1-225ENST00000551845 TULP4Q9NRJ4 1543 aa14.87□□□□□ -0.03
PTCH1-225ENST00000551845 ARHGEF28Q8N1W1 1705 aaKnown RBP14.86□□□□□ -0.03
PTCH1-225ENST00000551845 ADGRB2O60241 1585 aa14.86□□□□□ -0.03
PTCH1-225ENST00000551845 CDCA8Q53HL2 280 aa14.86□□□□□ -0.03
PTCH1-225ENST00000551845 ZNF692Q9BU19 519 aaPredicted RBP14.86□□□□□ -0.03
PTCH1-225ENST00000551845 TMC1Q8TDI8 760 aa14.85□□□□□ -0.03
PTCH1-225ENST00000551845 FMN2Q9NZ56 1722 aa14.84□□□□□ -0.03
PTCH1-225ENST00000551845 SBNO1A3KN83 1393 aa14.84□□□□□ -0.03
PTCH1-225ENST00000551845 UNC5CLQ8IV45 518 aa14.83□□□□□ -0.04
PTCH1-225ENST00000551845 PPIP5K1Q6PFW1 1433 aa14.83□□□□□ -0.04
PTCH1-225ENST00000551845 ATP7BP35670 1465 aa14.82□□□□□ -0.04
PTCH1-225ENST00000551845 LRP5O75197 1615 aa14.82□□□□□ -0.04
PTCH1-225ENST00000551845 HSPA5P11021 654 aaKnown RBP14.82□□□□□ -0.04
PTCH1-225ENST00000551845 HAP1P54257 671 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-225ENST00000551845 POLR3AO14802 1390 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-225ENST00000551845 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.81□□□□□ -0.04
PTCH1-225ENST00000551845 BRWD3Q6RI45 1802 aa14.81□□□□□ -0.04
PTCH1-225ENST00000551845 PLEKHG5O94827 1062 aa14.81□□□□□ -0.04
PTCH1-225ENST00000551845 SLC12A5Q9H2X9 1139 aa14.81□□□□□ -0.04
PTCH1-225ENST00000551845 PXDNQ92626 1479 aa14.81□□□□□ -0.04
PTCH1-225ENST00000551845 GLI3P10071 1580 aa14.81□□□□□ -0.04
PTCH1-225ENST00000551845 PSDA5PKW4 1024 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-225ENST00000551845 HDGFL2Q7Z4V5 671 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-225ENST00000551845 ABTB2Q8N961 1025 aa14.8□□□□□ -0.04
PTCH1-225ENST00000551845 TERF2IPQ9NYB0 399 aa14.8□□□□□ -0.04
PTCH1-225ENST00000551845 ARHGEF10O15013 1369 aa14.8□□□□□ -0.04
PTCH1-225ENST00000551845 EP400Q96L91 3159 aa14.8□□□□□ -0.04
PTCH1-225ENST00000551845 SEPT12Q8IYM1 358 aa14.79□□□□□ -0.04
PTCH1-225ENST00000551845 CCDC9Q9Y3X0 531 aaKnown RBP14.79□□□□□ -0.04
PTCH1-225ENST00000551845 BRD4O60885 1362 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-225ENST00000551845 CABLES1Q8TDN4 633 aa14.78□□□□□ -0.04
PTCH1-225ENST00000551845 USP32Q8NFA0 1604 aa14.77□□□□□ -0.04
PTCH1-225ENST00000551845 TNS3Q68CZ2 1445 aa14.77□□□□□ -0.04
PTCH1-225ENST00000551845 NLRP13Q86W25 1043 aa14.77□□□□□ -0.05
PTCH1-225ENST00000551845 KIF1AQ12756 1690 aa14.77□□□□□ -0.05
PTCH1-225ENST00000551845 QRICH2Q9H0J4 1663 aa14.77□□□□□ -0.05
PTCH1-225ENST00000551845 SLIT2O94813 1529 aa14.76□□□□□ -0.05
PTCH1-225ENST00000551845 A0A0G2JS52 829 aa14.76□□□□□ -0.05
PTCH1-225ENST00000551845 BAG6P46379 1132 aa14.76□□□□□ -0.05
PTCH1-225ENST00000551845 MYT1Q01538 1121 aa14.76□□□□□ -0.05
PTCH1-225ENST00000551845 NUTM2GQ5VZR2 741 aa14.76□□□□□ -0.05
PTCH1-225ENST00000551845 NLRP6P59044 892 aa14.75□□□□□ -0.05
PTCH1-225ENST00000551845 KRT27Q7Z3Y8 459 aa14.75□□□□□ -0.05
PTCH1-225ENST00000551845 POLR3GLQ9BT43 218 aa14.75□□□□□ -0.05
PTCH1-225ENST00000551845 KTN1Q86UP2 1357 aaKnown RBP14.74□□□□□ -0.05
PTCH1-225ENST00000551845 TTC21BQ7Z4L5 1316 aa14.74□□□□□ -0.05
PTCH1-225ENST00000551845 NINLQ9Y2I6 1382 aa14.73□□□□□ -0.05
PTCH1-225ENST00000551845 RGPD8O14715 1765 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-225ENST00000551845 VPS72Q15906 364 aa14.73□□□□□ -0.05
PTCH1-225ENST00000551845 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.73□□□□□ -0.05
PTCH1-225ENST00000551845 TTC21AQ8NDW8 1320 aa14.72□□□□□ -0.05
PTCH1-225ENST00000551845 ZEB1P37275 1124 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-225ENST00000551845 USP6P35125 1406 aa14.72□□□□□ -0.05
PTCH1-225ENST00000551845 CPSF1Q10570 1443 aaKnown RBP14.72□□□□□ -0.05
PTCH1-225ENST00000551845 FAM83GA6ND36 823 aa14.7□□□□□ -0.06
PTCH1-225ENST00000551845 GCP02774 474 aa14.7□□□□□ -0.06
PTCH1-225ENST00000551845 PLCH1Q4KWH8 1693 aa14.69□□□□□ -0.06
PTCH1-225ENST00000551845 ZC3H6P61129 1189 aaKnown RBP14.69□□□□□ -0.06
PTCH1-225ENST00000551845 SSH2Q76I76 1423 aa14.68□□□□□ -0.06
PTCH1-225ENST00000551845 C11orf95C9JLR9 678 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-225ENST00000551845 ONECUT3O60422 494 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-225ENST00000551845 EN1Q05925 392 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-225ENST00000551845 R3HDM1Q15032 1099 aaKnown RBP14.68□□□□□ -0.06
PTCH1-225ENST00000551845 KCNH5Q8NCM2 988 aa14.68□□□□□ -0.06
PTCH1-225ENST00000551845 PRDM11Q9NQV5 511 aa14.68□□□□□ -0.06
PTCH1-225ENST00000551845 ITSN1Q15811 1721 aa14.67□□□□□ -0.06
PTCH1-225ENST00000551845 NWD2Q9ULI1 1742 aa14.67□□□□□ -0.06
PTCH1-225ENST00000551845 A0A1W2PP64 1363 aa14.67□□□□□ -0.06
PTCH1-225ENST00000551845 ANKRD36BQ8N2N9 1353 aa14.66□□□□□ -0.06
PTCH1-225ENST00000551845 FAM98CQ17RN3 349 aaKnown RBP14.66□□□□□ -0.06
PTCH1-225ENST00000551845 NME9Q86XW9 330 aa14.66□□□□□ -0.06
PTCH1-225ENST00000551845 USP19O94966 1318 aa14.65□□□□□ -0.06
PTCH1-225ENST00000551845 TOPAZ1Q8N9V7 1692 aa14.65□□□□□ -0.06
PTCH1-225ENST00000551845 CD163L1Q9NR16 1453 aa14.64□□□□□ -0.07
PTCH1-225ENST00000551845 RGPD1P0DJD0 1748 aa14.64□□□□□ -0.07
PTCH1-225ENST00000551845 YY1P25490 414 aa14.64□□□□□ -0.07
PTCH1-225ENST00000551845 COG3Q96JB2 828 aa14.64□□□□□ -0.07
PTCH1-225ENST00000551845 CARD14Q9BXL6 1004 aa14.64□□□□□ -0.07
PTCH1-225ENST00000551845 PANK3Q9H999 370 aa14.64□□□□□ -0.07
PTCH1-225ENST00000551845 BTG4Q9NY30 223 aa14.64□□□□□ -0.07
PTCH1-225ENST00000551845 EDC4Q6P2E9 1401 aaKnown RBP14.64□□□□□ -0.07
PTCH1-225ENST00000551845 ZBTB7CA1YPR0 619 aa14.63□□□□□ -0.07
PTCH1-225ENST00000551845 FYB1O15117 783 aa14.63□□□□□ -0.07
PTCH1-225ENST00000551845 SOX12O15370 315 aa14.63□□□□□ -0.07
PTCH1-225ENST00000551845 EVA1CP58658 441 aa14.63□□□□□ -0.07
PTCH1-225ENST00000551845 CHRNA2Q15822 529 aa14.63□□□□□ -0.07
PTCH1-225ENST00000551845 USP31Q70CQ4 1352 aa14.62□□□□□ -0.07
PTCH1-225ENST00000551845 KIAA0232Q92628 1395 aa14.62□□□□□ -0.07
PTCH1-225ENST00000551845 FAM182BQ5T319 152 aa14.62□□□□□ -0.07
PTCH1-225ENST00000551845 PPP4R3CPQ6ZMV5 832 aa14.62□□□□□ -0.07
PTCH1-225ENST00000551845 KIF7Q2M1P5 1343 aa14.62□□□□□ -0.07
PTCH1-225ENST00000551845 ABCA3Q99758 1704 aa14.61□□□□□ -0.07
PTCH1-225ENST00000551845 GGNBP2Q9H3C7 697 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms