RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 YTHDC2Q9H6S0 1430 aaKnown RBP16.63■□□□□ 0.25
CACNB3-219ENST00000551544 ADGRB2O60241 1585 aa16.62■□□□□ 0.25
CACNB3-219ENST00000551544 MYO5BQ9ULV0 1848 aa16.62■□□□□ 0.25
CACNB3-219ENST00000551544 FRAT2O75474 233 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-219ENST00000551544 RIPK4P57078 832 aa16.62■□□□□ 0.25
CACNB3-219ENST00000551544 GSE1Q14687 1217 aa16.62■□□□□ 0.25
CACNB3-219ENST00000551544 HDGFL2Q7Z4V5 671 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-219ENST00000551544 CDK19Q9BWU1 502 aa16.62■□□□□ 0.25
CACNB3-219ENST00000551544 SSH1Q8WYL5 1049 aa16.62■□□□□ 0.25
CACNB3-219ENST00000551544 CABP1Q9NZU7 370 aa16.62■□□□□ 0.25
CACNB3-219ENST00000551544 DIAPH1O60610 1272 aaKnown RBP16.61■□□□□ 0.25
CACNB3-219ENST00000551544 TRIM27P14373 513 aa16.61■□□□□ 0.25
CACNB3-219ENST00000551544 CT47B1P0C2W7 299 aaPredicted RBP16.6■□□□□ 0.25
CACNB3-219ENST00000551544 ITPRIPQ8IWB1 547 aa16.6■□□□□ 0.25
CACNB3-219ENST00000551544 RICTORQ6R327 1708 aa16.6■□□□□ 0.25
CACNB3-219ENST00000551544 COL3A1P02461 1466 aaPredicted RBP16.6■□□□□ 0.25
CACNB3-219ENST00000551544 FBLN1P23142 703 aa16.6■□□□□ 0.25
CACNB3-219ENST00000551544 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.6■□□□□ 0.25
CACNB3-219ENST00000551544 UPF2Q9HAU5 1272 aaKnown RBP16.6■□□□□ 0.25
CACNB3-219ENST00000551544 VIRMAQ69YN4 1812 aaKnown RBP16.59■□□□□ 0.25
CACNB3-219ENST00000551544 CD163L1Q9NR16 1453 aa16.59■□□□□ 0.25
CACNB3-219ENST00000551544 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
CACNB3-219ENST00000551544 BECN1Q14457 450 aa16.59■□□□□ 0.25
CACNB3-219ENST00000551544 NOB1Q9ULX3 412 aaKnown RBP16.59■□□□□ 0.25
CACNB3-219ENST00000551544 PREX1Q8TCU6 1659 aa16.58■□□□□ 0.24
CACNB3-219ENST00000551544 ATF7IPQ6VMQ6 1270 aa16.57■□□□□ 0.24
CACNB3-219ENST00000551544 SLKQ9H2G2 1235 aaPredicted RBP16.57■□□□□ 0.24
CACNB3-219ENST00000551544 NLRP1Q9C000 1473 aa16.56■□□□□ 0.24
CACNB3-219ENST00000551544 WAPLQ7Z5K2 1190 aa16.56■□□□□ 0.24
CACNB3-219ENST00000551544 DNAJC5Q9H3Z4 198 aa16.56■□□□□ 0.24
CACNB3-219ENST00000551544 DDX19BQ9UMR2 479 aa16.55■□□□□ 0.24
CACNB3-219ENST00000551544 IL16Q14005 1332 aa16.55■□□□□ 0.24
CACNB3-219ENST00000551544 PNNQ9H307 717 aaKnown RBP16.55■□□□□ 0.24
CACNB3-219ENST00000551544 RTN4Q9NQC3 1192 aaKnown RBP16.55■□□□□ 0.24
CACNB3-219ENST00000551544 CYB5RLQ6IPT4 315 aa16.55■□□□□ 0.24
CACNB3-219ENST00000551544 TMEM57Q8N5G2 664 aa16.55■□□□□ 0.24
CACNB3-219ENST00000551544 MED14O60244 1454 aa16.54■□□□□ 0.24
CACNB3-219ENST00000551544 TBC1D32Q96NH3 1257 aa16.54■□□□□ 0.24
CACNB3-219ENST00000551544 ALKQ9UM73 1620 aa16.54■□□□□ 0.24
CACNB3-219ENST00000551544 PRKAR2BP31323 418 aa16.54■□□□□ 0.24
CACNB3-219ENST00000551544 ARHGEF40Q8TER5 1519 aa16.53■□□□□ 0.24
CACNB3-219ENST00000551544 PNPLA6Q8IY17 1366 aa16.53■□□□□ 0.24
CACNB3-219ENST00000551544 FCHSD2O94868 740 aa16.52■□□□□ 0.24
CACNB3-219ENST00000551544 ZMYM3Q14202 1370 aa16.52■□□□□ 0.24
CACNB3-219ENST00000551544 HMOX1P09601 288 aa16.52■□□□□ 0.23
CACNB3-219ENST00000551544 POLKQ9UBT6 870 aa16.52■□□□□ 0.23
CACNB3-219ENST00000551544 HDAC1Q13547 482 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-219ENST00000551544 IPO8O15397 1037 aaKnown RBP16.51■□□□□ 0.23
CACNB3-219ENST00000551544 FAM69CQ0P6D2 419 aa16.51■□□□□ 0.23
CACNB3-219ENST00000551544 CLTCQ00610 1675 aaKnown RBP16.51■□□□□ 0.23
CACNB3-219ENST00000551544 ANKRD26Q9UPS8 1709 aa16.51■□□□□ 0.23
CACNB3-219ENST00000551544 MLECQ14165 292 aa16.51■□□□□ 0.23
CACNB3-219ENST00000551544 KIF16BQ96L93 1317 aa16.5■□□□□ 0.23
CACNB3-219ENST00000551544 RSPH6AQ9H0K4 717 aa16.5■□□□□ 0.23
CACNB3-219ENST00000551544 MFAP1P55081 439 aaKnown RBP16.5■□□□□ 0.23
CACNB3-219ENST00000551544 THUMPD2Q9BTF0 503 aaKnown RBP16.5■□□□□ 0.23
CACNB3-219ENST00000551544 TBC1D2Q9BYX2 928 aa16.5■□□□□ 0.23
CACNB3-219ENST00000551544 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
CACNB3-219ENST00000551544 PHACTR3Q96KR7 559 aa16.49■□□□□ 0.23
CACNB3-219ENST00000551544 ZBTB40Q9NUA8 1239 aa16.49■□□□□ 0.23
CACNB3-219ENST00000551544 SPRYD3Q8NCJ5 442 aa16.48■□□□□ 0.23
CACNB3-219ENST00000551544 EMILIN1Q9Y6C2 1016 aa16.48■□□□□ 0.23
CACNB3-219ENST00000551544 LRRC7Q96NW7 1537 aa16.47■□□□□ 0.23
CACNB3-219ENST00000551544 ALDH1L2Q3SY69 923 aa16.47■□□□□ 0.23
CACNB3-219ENST00000551544 SMC5Q8IY18 1101 aa16.47■□□□□ 0.23
CACNB3-219ENST00000551544 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
CACNB3-219ENST00000551544 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
CACNB3-219ENST00000551544 NME9Q86XW9 330 aa16.46■□□□□ 0.23
CACNB3-219ENST00000551544 C22orf23Q9BZE7 217 aa16.46■□□□□ 0.23
CACNB3-219ENST00000551544 KIF20BQ96Q89 1820 aa16.46■□□□□ 0.22
CACNB3-219ENST00000551544 ELL2O00472 640 aaPredicted RBP16.46■□□□□ 0.22
CACNB3-219ENST00000551544 FAM135BQ49AJ0 1406 aa16.45■□□□□ 0.22
CACNB3-219ENST00000551544 RIMS2Q9UQ26 1411 aa16.45■□□□□ 0.22
CACNB3-219ENST00000551544 UBE2Q2Q8WVN8 375 aa16.45■□□□□ 0.22
CACNB3-219ENST00000551544 ANTXR1Q9H6X2 564 aa16.45■□□□□ 0.22
CACNB3-219ENST00000551544 LNPKQ9C0E8 428 aa16.45■□□□□ 0.22
CACNB3-219ENST00000551544 A2ML1A8K2U0 1454 aa16.44■□□□□ 0.22
CACNB3-219ENST00000551544 TXNDC2Q86VQ3 553 aa16.44■□□□□ 0.22
CACNB3-219ENST00000551544 TSPYL6Q8N831 410 aa16.44■□□□□ 0.22
CACNB3-219ENST00000551544 NCKAP5LQ9HCH0 1330 aa16.43■□□□□ 0.22
CACNB3-219ENST00000551544 ATP7BP35670 1465 aa16.43■□□□□ 0.22
CACNB3-219ENST00000551544 WASLO00401 505 aaPredicted RBP16.43■□□□□ 0.22
CACNB3-219ENST00000551544 VAMP4O75379 141 aa16.42■□□□□ 0.22
CACNB3-219ENST00000551544 PPIP5K1Q6PFW1 1433 aa16.42■□□□□ 0.22
CACNB3-219ENST00000551544 C1orf115Q9H7X2 142 aa16.42■□□□□ 0.22
CACNB3-219ENST00000551544 IL13P35225 146 aa16.41■□□□□ 0.22
CACNB3-219ENST00000551544 NUCB1Q02818 461 aa16.41■□□□□ 0.22
CACNB3-219ENST00000551544 RRS1Q15050 365 aaKnown RBP16.41■□□□□ 0.22
CACNB3-219ENST00000551544 CALD1Q05682 793 aaKnown RBP16.41■□□□□ 0.22
CACNB3-219ENST00000551544 MRPL50Q8N5N7 158 aaKnown RBP16.41■□□□□ 0.22
CACNB3-219ENST00000551544 CDC42BPGQ6DT37 1551 aa16.4■□□□□ 0.22
CACNB3-219ENST00000551544 DLC1Q96QB1 1528 aa16.4■□□□□ 0.22
CACNB3-219ENST00000551544 GNAI1P63096 354 aa16.4■□□□□ 0.22
CACNB3-219ENST00000551544 ZNF428Q96B54 188 aa16.4■□□□□ 0.22
CACNB3-219ENST00000551544 MBIPQ9NS73 344 aa16.4■□□□□ 0.22
CACNB3-219ENST00000551544 EIF5BO60841 1220 aaKnown RBP16.4■□□□□ 0.22
CACNB3-219ENST00000551544 CHD1LQ86WJ1 897 aa16.4■□□□□ 0.22
CACNB3-219ENST00000551544 NUDT16Q96DE0 195 aaKnown RBP16.4■□□□□ 0.22
CACNB3-219ENST00000551544 COG3Q96JB2 828 aa16.4■□□□□ 0.22
CACNB3-219ENST00000551544 PPP6R1Q9UPN7 881 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms