RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 EVA1BQ9NVM1 165 aa7.5□□□□□ -1.21
SCAF11-215ENST00000551391 SPDYE5A6NIY4 337 aa7.49□□□□□ -1.21
SCAF11-215ENST00000551391 NDUFV2P19404 249 aa7.49□□□□□ -1.21
SCAF11-215ENST00000551391 UNC93B1Q9H1C4 597 aa7.49□□□□□ -1.21
SCAF11-215ENST00000551391 NXF1Q9UBU9 619 aaKnown RBP7.49□□□□□ -1.21
SCAF11-215ENST00000551391 MOXD2PA6NHM9 499 aa7.48□□□□□ -1.21
SCAF11-215ENST00000551391 BMP1P13497 986 aa7.48□□□□□ -1.21
SCAF11-215ENST00000551391 KCNH2Q12809 1159 aa7.48□□□□□ -1.21
SCAF11-215ENST00000551391 MTMR2Q13614 643 aa7.48□□□□□ -1.21
SCAF11-215ENST00000551391 LINC01559Q495D7 138 aa7.48□□□□□ -1.21
SCAF11-215ENST00000551391 SH3D19Q5HYK7 790 aa7.48□□□□□ -1.21
SCAF11-215ENST00000551391 PRR7Q8TB68 274 aa7.48□□□□□ -1.21
SCAF11-215ENST00000551391 BAP1Q92560 729 aa7.48□□□□□ -1.21
SCAF11-215ENST00000551391 FAM181BA6NEQ2 426 aa7.47□□□□□ -1.21
SCAF11-215ENST00000551391 VARSP26640 1264 aaKnown RBP7.47□□□□□ -1.21
SCAF11-215ENST00000551391 CTHP32929 405 aa7.46□□□□□ -1.22
SCAF11-215ENST00000551391 SKIV2LQ15477 1246 aaKnown RBP7.46□□□□□ -1.22
SCAF11-215ENST00000551391 DESI1Q6ICB0 168 aa7.46□□□□□ -1.22
SCAF11-215ENST00000551391 TRIM46Q7Z4K8 759 aa7.46□□□□□ -1.22
SCAF11-215ENST00000551391 IRF7Q92985 503 aa7.46□□□□□ -1.22
SCAF11-215ENST00000551391 TBC1D2Q9BYX2 928 aa7.46□□□□□ -1.22
SCAF11-215ENST00000551391 GJA5P36382 358 aa7.45□□□□□ -1.22
SCAF11-215ENST00000551391 NPAS3Q8IXF0 933 aa7.45□□□□□ -1.22
SCAF11-215ENST00000551391 ZNF511Q8NB15 262 aa7.45□□□□□ -1.22
SCAF11-215ENST00000551391 SCARF1Q14162 830 aa7.44□□□□□ -1.22
SCAF11-215ENST00000551391 MYSM1Q5VVJ2 828 aa7.44□□□□□ -1.22
SCAF11-215ENST00000551391 TLL2Q9Y6L7 1015 aa7.44□□□□□ -1.22
SCAF11-215ENST00000551391 NNTQ13423 1086 aa7.43□□□□□ -1.22
SCAF11-215ENST00000551391 TUSC1Q2TAM9 212 aa7.43□□□□□ -1.22
SCAF11-215ENST00000551391 LCE2CQ5TA81 110 aa7.43□□□□□ -1.22
SCAF11-215ENST00000551391 MPNDQ8N594 471 aa7.43□□□□□ -1.22
SCAF11-215ENST00000551391 ZFP42Q96MM3 310 aa7.43□□□□□ -1.22
SCAF11-215ENST00000551391 SPTLC1O15269 473 aa7.42□□□□□ -1.22
SCAF11-215ENST00000551391 FAM174AQ8TBP5 190 aa7.42□□□□□ -1.22
SCAF11-215ENST00000551391 PCMTD1Q96MG8 357 aaPredicted RBP7.42□□□□□ -1.22
SCAF11-215ENST00000551391 GMPRP36959 345 aa7.41□□□□□ -1.22
SCAF11-215ENST00000551391 LYPD8Q6UX82 237 aa7.41□□□□□ -1.22
SCAF11-215ENST00000551391 GTF3C3Q9Y5Q9 886 aa7.41□□□□□ -1.22
SCAF11-215ENST00000551391 CLK2P49760 499 aaKnown RBP7.4□□□□□ -1.22
SCAF11-215ENST00000551391 VEGFBP49765 207 aa7.4□□□□□ -1.22
SCAF11-215ENST00000551391 WDR4P57081 412 aaKnown RBP7.4□□□□□ -1.22
SCAF11-215ENST00000551391 ARID5BQ14865 1188 aa7.4□□□□□ -1.22
SCAF11-215ENST00000551391 AGERQ15109 404 aa7.4□□□□□ -1.22
SCAF11-215ENST00000551391 MRPL14Q6P1L8 145 aaKnown RBP7.4□□□□□ -1.22
SCAF11-215ENST00000551391 RSBN1LQ6PCB5 846 aaPredicted RBP7.4□□□□□ -1.22
SCAF11-215ENST00000551391 RIC3Q7Z5B4 369 aa7.4□□□□□ -1.22
SCAF11-215ENST00000551391 ZSCAN1Q8NBB4 408 aa7.4□□□□□ -1.22
SCAF11-215ENST00000551391 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.4□□□□□ -1.22
SCAF11-215ENST00000551391 H3BM21 787 aa7.39□□□□□ -1.23
SCAF11-215ENST00000551391 ADH1CP00326 375 aa7.39□□□□□ -1.23
SCAF11-215ENST00000551391 ZBTB3Q9H5J0 574 aa7.39□□□□□ -1.23
SCAF11-215ENST00000551391 POLR3EQ9NVU0 708 aa7.39□□□□□ -1.23
SCAF11-215ENST00000551391 PROCA1Q8NCQ7 364 aaPredicted RBP7.38□□□□□ -1.23
SCAF11-215ENST00000551391 PURBQ96QR8 312 aaKnown RBP7.38□□□□□ -1.23
SCAF11-215ENST00000551391 LIMD1Q9UGP4 676 aa7.38□□□□□ -1.23
SCAF11-215ENST00000551391 TIMP2P16035 220 aa7.37□□□□□ -1.23
SCAF11-215ENST00000551391 HRCP23327 699 aa7.37□□□□□ -1.23
SCAF11-215ENST00000551391 PCDHB15Q9Y5E8 787 aa7.37□□□□□ -1.23
SCAF11-215ENST00000551391 PRPF38BQ5VTL8 546 aaKnown RBP7.36□□□□□ -1.23
SCAF11-215ENST00000551391 PPP2R2DQ66LE6 453 aa7.36□□□□□ -1.23
SCAF11-215ENST00000551391 TSC1Q92574 1164 aa7.36□□□□□ -1.23
SCAF11-215ENST00000551391 FOXJ1Q92949 421 aa7.36□□□□□ -1.23
SCAF11-215ENST00000551391 MAP10Q9P2G4 905 aa7.36□□□□□ -1.23
SCAF11-215ENST00000551391 NUTM2BA6NNL0 878 aaPredicted RBP7.35□□□□□ -1.23
SCAF11-215ENST00000551391 NUTM2EB1AL46 878 aaPredicted RBP7.35□□□□□ -1.23
SCAF11-215ENST00000551391 CFAP99D6REC4 459 aa7.35□□□□□ -1.23
SCAF11-215ENST00000551391 UPP2O95045 317 aa7.35□□□□□ -1.23
SCAF11-215ENST00000551391 ZIC2O95409 532 aaPredicted RBP7.35□□□□□ -1.23
SCAF11-215ENST00000551391 NR5A1Q13285 461 aa7.35□□□□□ -1.23
SCAF11-215ENST00000551391 CSPP1Q1MSJ5 1256 aa7.35□□□□□ -1.23
SCAF11-215ENST00000551391 NUTM2DQ5VT03 806 aaPredicted RBP7.35□□□□□ -1.23
SCAF11-215ENST00000551391 BPHLQ86WA6 291 aaPredicted RBP7.35□□□□□ -1.23
SCAF11-215ENST00000551391 NUTM2AQ8IVF1 878 aaPredicted RBP7.35□□□□□ -1.23
SCAF11-215ENST00000551391 CDK15Q96Q40 435 aa7.35□□□□□ -1.23
SCAF11-215ENST00000551391 MAN1A2O60476 641 aa7.34□□□□□ -1.23
SCAF11-215ENST00000551391 LILRB3O75022 631 aa7.34□□□□□ -1.23
SCAF11-215ENST00000551391 ERBB4Q15303 1308 aa7.33□□□□□ -1.24
SCAF11-215ENST00000551391 F12P00748 615 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-215ENST00000551391 C6orf118Q5T5N4 469 aa7.33□□□□□ -1.24
SCAF11-215ENST00000551391 ARMC2Q8NEN0 867 aa7.33□□□□□ -1.24
SCAF11-215ENST00000551391 SOBPA7XYQ1 873 aa7.32□□□□□ -1.24
SCAF11-215ENST00000551391 CABLES1Q8TDN4 633 aa7.32□□□□□ -1.24
SCAF11-215ENST00000551391 KLF16Q9BXK1 252 aaPredicted RBP7.32□□□□□ -1.24
SCAF11-215ENST00000551391 ZFAND3Q9H8U3 227 aa7.32□□□□□ -1.24
SCAF11-215ENST00000551391 BMP2P12643 396 aa7.31□□□□□ -1.24
SCAF11-215ENST00000551391 QPCTQ16769 361 aa7.31□□□□□ -1.24
SCAF11-215ENST00000551391 ITPKCQ96DU7 683 aa7.31□□□□□ -1.24
SCAF11-215ENST00000551391 ATP1B4Q9UN42 357 aaPredicted RBP7.31□□□□□ -1.24
SCAF11-215ENST00000551391 RFC5P40937 340 aa7.3□□□□□ -1.24
SCAF11-215ENST00000551391 TMEM259Q4ZIN3 620 aa7.3□□□□□ -1.24
SCAF11-215ENST00000551391 ERICH6Q7L0X2 663 aa7.3□□□□□ -1.24
SCAF11-215ENST00000551391 PER1O15534 1290 aaPredicted RBP7.29□□□□□ -1.24
SCAF11-215ENST00000551391 NR3C2P08235 984 aa7.29□□□□□ -1.24
SCAF11-215ENST00000551391 NBPF14Q5TI25 921 aa7.29□□□□□ -1.24
SCAF11-215ENST00000551391 FBXO31Q5XUX0 539 aaPredicted RBP7.29□□□□□ -1.24
SCAF11-215ENST00000551391 BANK1Q8NDB2 785 aa7.29□□□□□ -1.24
SCAF11-215ENST00000551391 HELBQ8NG08 1087 aaPredicted RBP7.29□□□□□ -1.24
SCAF11-215ENST00000551391 LORP23490 312 aaPredicted RBP7.28□□□□□ -1.24
SCAF11-215ENST00000551391 GRM5P41594 1212 aa7.28□□□□□ -1.24
SCAF11-215ENST00000551391 FLIIQ13045 1269 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms