RNA–Protein interactions for RNA: ENST00000551132.5

CNOT2-228, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-228ENST00000551132 COG3Q96JB2 828 aa13.25□□□□□ -0.29
CNOT2-228ENST00000551132 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.291e-6■■□□□ 11.9
CNOT2-228ENST00000551132 WWC1Q8IX03 1113 aa13.24□□□□□ -0.29
CNOT2-228ENST00000551132 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
CNOT2-228ENST00000551132 MON2Q7Z3U7 1717 aa13.23□□□□□ -0.29
CNOT2-228ENST00000551132 CALD1Q05682 793 aaKnown RBP13.23□□□□□ -0.29
CNOT2-228ENST00000551132 NEUROD2Q15784 382 aa13.23□□□□□ -0.29
CNOT2-228ENST00000551132 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
CNOT2-228ENST00000551132 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
CNOT2-228ENST00000551132 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
CNOT2-228ENST00000551132 CRBNQ96SW2 442 aa13.23□□□□□ -0.29
CNOT2-228ENST00000551132 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
CNOT2-228ENST00000551132 CDK12Q9NYV4 1490 aaPredicted RBP13.23□□□□□ -0.29
CNOT2-228ENST00000551132 CT47B1P0C2W7 299 aaPredicted RBP13.22□□□□□ -0.29
CNOT2-228ENST00000551132 MS4A1P11836 297 aa13.22□□□□□ -0.29
CNOT2-228ENST00000551132 TBX22Q9Y458 520 aa13.22□□□□□ -0.29
CNOT2-228ENST00000551132 AATKQ6ZMQ8 1374 aa13.21□□□□□ -0.29
CNOT2-228ENST00000551132 CEP170BQ9Y4F5 1589 aaPredicted RBP13.21□□□□□ -0.29
CNOT2-228ENST00000551132 TCERG1O14776 1098 aaKnown RBP13.21□□□□□ -0.29
CNOT2-228ENST00000551132 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
CNOT2-228ENST00000551132 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
CNOT2-228ENST00000551132 AKAP12Q02952 1782 aa13.2□□□□□ -0.3
CNOT2-228ENST00000551132 PLIN1O60240 522 aa13.2□□□□□ -0.3
CNOT2-228ENST00000551132 CEBPAP49715 358 aaPredicted RBP13.2□□□□□ -0.3
CNOT2-228ENST00000551132 LMOD3Q0VAK6 560 aa13.2□□□□□ -0.3
CNOT2-228ENST00000551132 AAMPQ13685 434 aa13.2□□□□□ -0.3
CNOT2-228ENST00000551132 RRP7AQ9Y3A4 280 aaKnown RBP13.2□□□□□ -0.3
CNOT2-228ENST00000551132 PNPLA6Q8IY17 1366 aa13.2□□□□□ -0.3
CNOT2-228ENST00000551132 IL16Q14005 1332 aa13.19□□□□□ -0.3
CNOT2-228ENST00000551132 TOPAZ1Q8N9V7 1692 aa13.19□□□□□ -0.3
CNOT2-228ENST00000551132 PPM1GO15355 546 aaPredicted RBP13.19□□□□□ -0.3
CNOT2-228ENST00000551132 MYT1Q01538 1121 aa13.19□□□□□ -0.3
CNOT2-228ENST00000551132 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
CNOT2-228ENST00000551132 RIMS1Q86UR5 1692 aaKnown RBP13.18□□□□□ -0.3
CNOT2-228ENST00000551132 FANCIQ9NVI1 1328 aa13.18□□□□□ -0.3
CNOT2-228ENST00000551132 FCHSD2O94868 740 aa13.18□□□□□ -0.3
CNOT2-228ENST00000551132 PDE3AQ14432 1141 aa13.18□□□□□ -0.3
CNOT2-228ENST00000551132 ANKARQ7Z5J8 1434 aa13.17□□□□□ -0.3
CNOT2-228ENST00000551132 LTKP29376 864 aa13.17□□□□□ -0.3
CNOT2-228ENST00000551132 ANP32AP39687 249 aaKnown RBP13.17□□□□□ -0.3
CNOT2-228ENST00000551132 AMOTL2Q9Y2J4 779 aa13.17□□□□□ -0.3
CNOT2-228ENST00000551132 TTC21AQ8NDW8 1320 aa13.16□□□□□ -0.3
CNOT2-228ENST00000551132 TMPOP42166 694 aaKnown RBP13.16□□□□□ -0.3
CNOT2-228ENST00000551132 SLC26A8Q96RN1 970 aa13.16□□□□□ -0.3
CNOT2-228ENST00000551132 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
CNOT2-228ENST00000551132 LRRC7Q96NW7 1537 aa13.16□□□□□ -0.3
CNOT2-228ENST00000551132 ZNF142P52746 1687 aaPredicted RBP13.15□□□□□ -0.3
CNOT2-228ENST00000551132 PLEKHG3A1L390 1219 aa13.15□□□□□ -0.3
CNOT2-228ENST00000551132 NME9Q86XW9 330 aa13.15□□□□□ -0.3
CNOT2-228ENST00000551132 POLKQ9UBT6 870 aa13.15□□□□□ -0.3
CNOT2-228ENST00000551132 NRKQ7Z2Y5 1582 aa13.15□□□□□ -0.3
CNOT2-228ENST00000551132 USP6P35125 1406 aa13.14□□□□□ -0.31
CNOT2-228ENST00000551132 XRN1Q8IZH2 1706 aaKnown RBP13.14□□□□□ -0.31
CNOT2-228ENST00000551132 RIPK4P57078 832 aa13.14□□□□□ -0.31
CNOT2-228ENST00000551132 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
CNOT2-228ENST00000551132 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.13□□□□□ -0.31
CNOT2-228ENST00000551132 PRKAR2BP31323 418 aa13.13□□□□□ -0.31
CNOT2-228ENST00000551132 ANKLE2Q86XL3 938 aa13.13□□□□□ -0.31
CNOT2-228ENST00000551132 FTSJ3Q8IY81 847 aaKnown RBP13.13□□□□□ -0.31
CNOT2-228ENST00000551132 FRAT1Q92837 279 aaPredicted RBP13.13□□□□□ -0.31
CNOT2-228ENST00000551132 PLEKHF1Q96S99 279 aa13.13□□□□□ -0.31
CNOT2-228ENST00000551132 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
CNOT2-228ENST00000551132 PTPRUQ92729 1446 aa13.13□□□□□ -0.31
CNOT2-228ENST00000551132 ACEP12821 1306 aa13.13□□□□□ -0.31
CNOT2-228ENST00000551132 NGDNQ8NEJ9 315 aaKnown RBP13.12□□□□□ -0.31
CNOT2-228ENST00000551132 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
CNOT2-228ENST00000551132 PRR36Q9H6K5 1346 aa13.12□□□□□ -0.31
CNOT2-228ENST00000551132 BCAR3O75815 825 aa13.11□□□□□ -0.31
CNOT2-228ENST00000551132 RARSP54136 660 aaKnown RBP13.11□□□□□ -0.31
CNOT2-228ENST00000551132 HAP1P54257 671 aaPredicted RBP13.11□□□□□ -0.31
CNOT2-228ENST00000551132 NFE2L2Q16236 605 aa13.11□□□□□ -0.31
CNOT2-228ENST00000551132 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
CNOT2-228ENST00000551132 C20orf194Q5TEA3 1177 aa13.1□□□□□ -0.31
CNOT2-228ENST00000551132 ZKSCAN2Q63HK3 967 aa13.1□□□□□ -0.31
CNOT2-228ENST00000551132 PMFBP1Q8TBY8 1022 aa13.1□□□□□ -0.31
CNOT2-228ENST00000551132 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
CNOT2-228ENST00000551132 CHMP4BQ9H444 224 aaKnown RBP13.1□□□□□ -0.31
CNOT2-228ENST00000551132 SMC4Q9NTJ3 1288 aa13.1□□□□□ -0.31
CNOT2-228ENST00000551132 OVOS2A0A0J9YW53 1432 aa13.1□□□□□ -0.31
CNOT2-228ENST00000551132 OVOS2Q6IE36 1432 aa13.1□□□□□ -0.31
CNOT2-228ENST00000551132 IPO8O15397 1037 aaKnown RBP13.09□□□□□ -0.31
CNOT2-228ENST00000551132 EMILIN1Q9Y6C2 1016 aa13.09□□□□□ -0.31
CNOT2-228ENST00000551132 MAP2P11137 1827 aaKnown RBP13.09□□□□□ -0.31
CNOT2-228ENST00000551132 IL13P35225 146 aa13.08□□□□□ -0.32
CNOT2-228ENST00000551132 GNAI1P63096 354 aa13.08□□□□□ -0.32
CNOT2-228ENST00000551132 CLUAP1Q96AJ1 413 aa13.08□□□□□ -0.32
CNOT2-228ENST00000551132 DMRT2Q9Y5R5 561 aa13.08□□□□□ -0.32
CNOT2-228ENST00000551132 ADAMTSL3P82987 1691 aa13.08□□□□□ -0.32
CNOT2-228ENST00000551132 NALCNQ8IZF0 1738 aa13.08□□□□□ -0.32
CNOT2-228ENST00000551132 NUTM2FA1L443 756 aa13.07□□□□□ -0.32
CNOT2-228ENST00000551132 FMN2Q9NZ56 1722 aa13.06□□□□□ -0.32
CNOT2-228ENST00000551132 HMOX1P09601 288 aa13.06□□□□□ -0.32
CNOT2-228ENST00000551132 RRS1Q15050 365 aaKnown RBP13.06□□□□□ -0.32
CNOT2-228ENST00000551132 ALDH1L2Q3SY69 923 aa13.06□□□□□ -0.32
CNOT2-228ENST00000551132 IFT57Q9NWB7 429 aa13.06□□□□□ -0.32
CNOT2-228ENST00000551132 TRIM35Q9UPQ4 493 aa13.06□□□□□ -0.32
CNOT2-228ENST00000551132 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
CNOT2-228ENST00000551132 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
CNOT2-228ENST00000551132 FLT4P35916 1363 aa13.06□□□□□ -0.32
CNOT2-228ENST00000551132 USP31Q70CQ4 1352 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms