RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, humanhuman

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-208ENST00000550811 ATAD2Q6PL18 1390 aa13.23□□□□□ -0.29
TUBA1A-208ENST00000550811 CCDC7Q96M83 1385 aa13.23□□□□□ -0.29
TUBA1A-208ENST00000550811 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
TUBA1A-208ENST00000550811 WASLO00401 505 aaPredicted RBP13.23□□□□□ -0.29
TUBA1A-208ENST00000550811 SRPK2P78362 688 aaKnown RBP13.23□□□□□ -0.29
TUBA1A-208ENST00000550811 CDK19Q9BWU1 502 aa13.22□□□□□ -0.29
TUBA1A-208ENST00000550811 C19orf44Q9H6X5 657 aa13.22□□□□□ -0.29
TUBA1A-208ENST00000550811 IQSEC2Q5JU85 1478 aa13.22□□□□□ -0.29
TUBA1A-208ENST00000550811 WASHC2AQ641Q2 1341 aa13.21□□□□□ -0.29
TUBA1A-208ENST00000550811 C11orf95C9JLR9 678 aaPredicted RBP13.21□□□□□ -0.29
TUBA1A-208ENST00000550811 HS6ST3Q8IZP7 471 aa13.21□□□□□ -0.29
TUBA1A-208ENST00000550811 RGPD8O14715 1765 aaPredicted RBP13.21□□□□□ -0.29
TUBA1A-208ENST00000550811 ERICH6Q7L0X2 663 aa13.2□□□□□ -0.3
TUBA1A-208ENST00000550811 PUS7Q96PZ0 661 aaKnown RBP13.2□□□□□ -0.3
TUBA1A-208ENST00000550811 POLR3GLQ9BT43 218 aa13.2□□□□□ -0.3
TUBA1A-208ENST00000550811 CABP2Q9NPB3 220 aa13.2□□□□□ -0.3
TUBA1A-208ENST00000550811 NINLQ9Y2I6 1382 aa13.2□□□□□ -0.3
TUBA1A-208ENST00000550811 KIF1AQ12756 1690 aa13.19□□□□□ -0.3
TUBA1A-208ENST00000550811 ATF3P18847 181 aa13.19□□□□□ -0.3
TUBA1A-208ENST00000550811 CADPS2Q86UW7 1296 aa13.19□□□□□ -0.3
TUBA1A-208ENST00000550811 MST1RQ04912 1400 aa13.19□□□□□ -0.3
TUBA1A-208ENST00000550811 GSE1Q14687 1217 aa13.18□□□□□ -0.3
TUBA1A-208ENST00000550811 PPIP5K1Q6PFW1 1433 aa13.18□□□□□ -0.3
TUBA1A-208ENST00000550811 C1orf167Q5SNV9 1468 aa13.17□□□□□ -0.3
TUBA1A-208ENST00000550811 PRR36Q9H6K5 1346 aa13.17□□□□□ -0.3
TUBA1A-208ENST00000550811 NUTM2FA1L443 756 aa13.17□□□□□ -0.3
TUBA1A-208ENST00000550811 NUDT16Q96DE0 195 aaKnown RBP13.17□□□□□ -0.3
TUBA1A-208ENST00000550811 AKAP12Q02952 1782 aa13.16□□□□□ -0.3
TUBA1A-208ENST00000550811 CCDC61Q9Y6R9 512 aa13.15□□□□□ -0.3
TUBA1A-208ENST00000550811 MON2Q7Z3U7 1717 aa13.15□□□□□ -0.3
TUBA1A-208ENST00000550811 TMC1Q8TDI8 760 aa13.14□□□□□ -0.31
TUBA1A-208ENST00000550811 CD163L1Q9NR16 1453 aa13.13□□□□□ -0.31
TUBA1A-208ENST00000550811 ANKRD36BQ8N2N9 1353 aa13.13□□□□□ -0.31
TUBA1A-208ENST00000550811 NRKQ7Z2Y5 1582 aa13.12□□□□□ -0.31
TUBA1A-208ENST00000550811 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
TUBA1A-208ENST00000550811 CERKQ8TCT0 537 aa13.12□□□□□ -0.31
TUBA1A-208ENST00000550811 ROBO1Q9Y6N7 1651 aa13.12□□□□□ -0.31
TUBA1A-208ENST00000550811 POLR3AO14802 1390 aaPredicted RBP13.11□□□□□ -0.31
TUBA1A-208ENST00000550811 ESCO1Q5FWF5 840 aa13.11□□□□□ -0.31
TUBA1A-208ENST00000550811 SLC12A5Q9H2X9 1139 aa13.11□□□□□ -0.31
TUBA1A-208ENST00000550811 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
TUBA1A-208ENST00000550811 CPSF1Q10570 1443 aaKnown RBP13.11□□□□□ -0.31
TUBA1A-208ENST00000550811 PLEKHG3A1L390 1219 aa13.1□□□□□ -0.31
TUBA1A-208ENST00000550811 TERF2IPQ9NYB0 399 aa13.1□□□□□ -0.31
TUBA1A-208ENST00000550811 SLAIN2Q9P270 581 aa13.1□□□□□ -0.31
TUBA1A-208ENST00000550811 PHF8Q9UPP1 1060 aa13.1□□□□□ -0.31
TUBA1A-208ENST00000550811 NHSL1Q5SYE7 1610 aa13.1□□□□□ -0.31
TUBA1A-208ENST00000550811 KIF20BQ96Q89 1820 aa13.09□□□□□ -0.31
TUBA1A-208ENST00000550811 DDX10Q13206 875 aaKnown RBP13.09□□□□□ -0.31
TUBA1A-208ENST00000550811 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
TUBA1A-208ENST00000550811 PMFBP1Q8TBY8 1022 aa13.09□□□□□ -0.31
TUBA1A-208ENST00000550811 ORAI2Q96SN7 254 aa13.09□□□□□ -0.31
TUBA1A-208ENST00000550811 PLSCR2Q9NRY7 297 aa13.09□□□□□ -0.31
TUBA1A-208ENST00000550811 USP6P35125 1406 aa13.08□□□□□ -0.32
TUBA1A-208ENST00000550811 NSD3Q9BZ95 1437 aa13.08□□□□□ -0.32
TUBA1A-208ENST00000550811 TOM1O60784 492 aa13.08□□□□□ -0.32
TUBA1A-208ENST00000550811 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
TUBA1A-208ENST00000550811 ACEP12821 1306 aa13.08□□□□□ -0.32
TUBA1A-208ENST00000550811 TRPM3Q9HCF6 1732 aaPredicted RBP13.08□□□□□ -0.32
TUBA1A-208ENST00000550811 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
TUBA1A-208ENST00000550811 EDC4Q6P2E9 1401 aaKnown RBP13.07□□□□□ -0.32
TUBA1A-208ENST00000550811 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
TUBA1A-208ENST00000550811 PANK3Q9H999 370 aa13.07□□□□□ -0.32
TUBA1A-208ENST00000550811 AHDC1Q5TGY3 1603 aaPredicted RBP13.06□□□□□ -0.32
TUBA1A-208ENST00000550811 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
TUBA1A-208ENST00000550811 PXDNQ92626 1479 aa13.05□□□□□ -0.32
TUBA1A-208ENST00000550811 NPHP3Q7Z494 1330 aa13.05□□□□□ -0.32
TUBA1A-208ENST00000550811 BRD4O60885 1362 aaPredicted RBP13.05□□□□□ -0.32
TUBA1A-208ENST00000550811 ANKRD26Q9UPS8 1709 aa13.05□□□□□ -0.32
TUBA1A-208ENST00000550811 RYDENQ9NUL5 291 aaKnown RBP13.04□□□□□ -0.32
TUBA1A-208ENST00000550811 PIK3C2AO00443 1686 aa13.04□□□□□ -0.32
TUBA1A-208ENST00000550811 PHLPP1O60346 1717 aa13.04□□□□□ -0.32
TUBA1A-208ENST00000550811 SSH2Q76I76 1423 aa13.04□□□□□ -0.32
TUBA1A-208ENST00000550811 ALS2Q96Q42 1657 aa13.03□□□□□ -0.32
TUBA1A-208ENST00000550811 FOXO3O43524 673 aa13.03□□□□□ -0.32
TUBA1A-208ENST00000550811 KNSTRNQ9Y448 316 aa13.03□□□□□ -0.32
TUBA1A-208ENST00000550811 USP54Q70EL1 1684 aa13.02□□□□□ -0.32
TUBA1A-208ENST00000550811 PIP4K2BP78356 416 aa13.02□□□□□ -0.33
TUBA1A-208ENST00000550811 PSME1Q06323 249 aa13.02□□□□□ -0.33
TUBA1A-208ENST00000550811 CARD14Q9BXL6 1004 aa13.02□□□□□ -0.33
TUBA1A-208ENST00000550811 CGNL1Q0VF96 1302 aa13.02□□□□□ -0.33
TUBA1A-208ENST00000550811 NSD2O96028 1365 aa13.02□□□□□ -0.33
TUBA1A-208ENST00000550811 TTC21AQ8NDW8 1320 aa13.01□□□□□ -0.33
TUBA1A-208ENST00000550811 TNS3Q68CZ2 1445 aa13.01□□□□□ -0.33
TUBA1A-208ENST00000550811 COL16A1Q07092 1604 aaPredicted RBP13.01□□□□□ -0.33
TUBA1A-208ENST00000550811 SBNO1A3KN83 1393 aa13□□□□□ -0.33
TUBA1A-208ENST00000550811 NPC1L1Q9UHC9 1359 aa13□□□□□ -0.33
TUBA1A-208ENST00000550811 TTC21BQ7Z4L5 1316 aa13□□□□□ -0.33
TUBA1A-208ENST00000550811 PER1O15534 1290 aaPredicted RBP13□□□□□ -0.33
TUBA1A-208ENST00000550811 XPCQ01831 940 aaPredicted RBP13□□□□□ -0.33
TUBA1A-208ENST00000550811 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13□□□□□ -0.33
TUBA1A-208ENST00000550811 DDX17Q92841 729 aaKnown RBP13□□□□□ -0.33
TUBA1A-208ENST00000550811 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
TUBA1A-208ENST00000550811 SOS2Q07890 1332 aaPredicted RBP12.99□□□□□ -0.33
TUBA1A-208ENST00000550811 HAX1O00165 279 aa12.99□□□□□ -0.33
TUBA1A-208ENST00000550811 KRT28Q7Z3Y7 464 aa12.99□□□□□ -0.33
TUBA1A-208ENST00000550811 MED1Q15648 1581 aaPredicted RBP12.98□□□□□ -0.33
TUBA1A-208ENST00000550811 OVOS2A0A0J9YW53 1432 aa12.98□□□□□ -0.33
TUBA1A-208ENST00000550811 OVOS2Q6IE36 1432 aa12.98□□□□□ -0.33
TUBA1A-208ENST00000550811 RIOK3O14730 519 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms