RNA–Protein interactions for RNA: ENST00000550552.5

TMEM106C-215, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best) BASIC

Gene TMEM106C, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-215ENST00000550552 ZNF772Q68DY9 489 aaPredicted RBP9.14□□□□□ -0.95
TMEM106C-215ENST00000550552 PUS7Q96PZ0 661 aaKnown RBP9.14□□□□□ -0.95
TMEM106C-215ENST00000550552 QTRT2Q9H974 415 aaKnown RBP9.14□□□□□ -0.95
TMEM106C-215ENST00000550552 ABTB2Q8N961 1025 aa9.13□□□□□ -0.95
TMEM106C-215ENST00000550552 ZNF692Q9BU19 519 aaPredicted RBP9.13□□□□□ -0.95
TMEM106C-215ENST00000550552 SSH2Q76I76 1423 aa9.13□□□□□ -0.95
TMEM106C-215ENST00000550552 ATAD2Q6PL18 1390 aa9.12□□□□□ -0.95
TMEM106C-215ENST00000550552 TRPM3Q9HCF6 1732 aaPredicted RBP9.12□□□□□ -0.95
TMEM106C-215ENST00000550552 HAP1P54257 671 aaPredicted RBP9.12□□□□□ -0.95
TMEM106C-215ENST00000550552 TMC1Q8TDI8 760 aa9.12□□□□□ -0.95
TMEM106C-215ENST00000550552 USP21Q9UK80 565 aa9.12□□□□□ -0.95
TMEM106C-215ENST00000550552 TOPAZ1Q8N9V7 1692 aa9.12□□□□□ -0.95
TMEM106C-215ENST00000550552 CPSF1Q10570 1443 aaKnown RBP9.12□□□□□ -0.95
TMEM106C-215ENST00000550552 TTC21BQ7Z4L5 1316 aa9.11□□□□□ -0.95
TMEM106C-215ENST00000550552 BCL9LQ86UU0 1499 aa9.11□□□□□ -0.95
TMEM106C-215ENST00000550552 SLC24A1O60721 1099 aa9.11□□□□□ -0.95
TMEM106C-215ENST00000550552 HSPA5P11021 654 aaKnown RBP9.11□□□□□ -0.95
TMEM106C-215ENST00000550552 USP6P35125 1406 aa9.11□□□□□ -0.95
TMEM106C-215ENST00000550552 CD163L1Q9NR16 1453 aa9.1□□□□□ -0.95
TMEM106C-215ENST00000550552 SOCS7O14512 581 aa9.1□□□□□ -0.95
TMEM106C-215ENST00000550552 GCP02774 474 aa9.1□□□□□ -0.95
TMEM106C-215ENST00000550552 RXRBP28702 533 aa9.1□□□□□ -0.95
TMEM106C-215ENST00000550552 ZC3H6P61129 1189 aaKnown RBP9.1□□□□□ -0.95
TMEM106C-215ENST00000550552 TMF1P82094 1093 aa9.1□□□□□ -0.95
TMEM106C-215ENST00000550552 BRD4O60885 1362 aaPredicted RBP9.1□□□□□ -0.95
TMEM106C-215ENST00000550552 KTN1Q86UP2 1357 aaKnown RBP9.1□□□□□ -0.95
TMEM106C-215ENST00000550552 ALS2Q96Q42 1657 aa9.1□□□□□ -0.95
TMEM106C-215ENST00000550552 ITSN1Q15811 1721 aa9.09□□□□□ -0.95
TMEM106C-215ENST00000550552 NLRP6P59044 892 aa9.09□□□□□ -0.95
TMEM106C-215ENST00000550552 EIF4G2P78344 907 aaKnown RBP eCLIP9.09□□□□□ -0.95
TMEM106C-215ENST00000550552 NLRP13Q86W25 1043 aa9.09□□□□□ -0.95
TMEM106C-215ENST00000550552 UNC5CLQ8IV45 518 aa9.09□□□□□ -0.95
TMEM106C-215ENST00000550552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.09□□□□□ -0.95
TMEM106C-215ENST00000550552 ZRANB1Q9UGI0 708 aa9.09□□□□□ -0.95
TMEM106C-215ENST00000550552 SLIT2O94813 1529 aa9.09□□□□□ -0.95
TMEM106C-215ENST00000550552 USP19O94966 1318 aa9.08□□□□□ -0.96
TMEM106C-215ENST00000550552 C11orf95C9JLR9 678 aaPredicted RBP9.08□□□□□ -0.96
TMEM106C-215ENST00000550552 RBM6P78332 1123 aaKnown RBP9.08□□□□□ -0.96
TMEM106C-215ENST00000550552 CHRNA2Q15822 529 aa9.08□□□□□ -0.96
TMEM106C-215ENST00000550552 BTG4Q9NY30 223 aa9.08□□□□□ -0.96
TMEM106C-215ENST00000550552 TERF2IPQ9NYB0 399 aa9.08□□□□□ -0.96
TMEM106C-215ENST00000550552 TRPC5Q9UL62 973 aaPredicted RBP9.08□□□□□ -0.96
TMEM106C-215ENST00000550552 ATRNO75882 1429 aa9.07□□□□□ -0.96
TMEM106C-215ENST00000550552 HDGFL2Q7Z4V5 671 aaPredicted RBP9.07□□□□□ -0.96
TMEM106C-215ENST00000550552 NME9Q86XW9 330 aa9.07□□□□□ -0.96
TMEM106C-215ENST00000550552 PRDM11Q9NQV5 511 aa9.07□□□□□ -0.96
TMEM106C-215ENST00000550552 A0A1W2PP64 1363 aa9.07□□□□□ -0.96
TMEM106C-215ENST00000550552 KIAA0232Q92628 1395 aa9.07□□□□□ -0.96
TMEM106C-215ENST00000550552 TTC21AQ8NDW8 1320 aa9.06□□□□□ -0.96
TMEM106C-215ENST00000550552 VPS72Q15906 364 aa9.06□□□□□ -0.96
TMEM106C-215ENST00000550552 CDCA8Q53HL2 280 aa9.06□□□□□ -0.96
TMEM106C-215ENST00000550552 GJD4Q96KN9 370 aaPredicted RBP9.06□□□□□ -0.96
TMEM106C-215ENST00000550552 CARD14Q9BXL6 1004 aa9.05□□□□□ -0.96
TMEM106C-215ENST00000550552 CPDO75976 1380 aa9.04□□□□□ -0.96
TMEM106C-215ENST00000550552 USP31Q70CQ4 1352 aa9.04□□□□□ -0.96
TMEM106C-215ENST00000550552 NINLQ9Y2I6 1382 aa9.04□□□□□ -0.96
TMEM106C-215ENST00000550552 SOX12O15370 315 aa9.04□□□□□ -0.96
TMEM106C-215ENST00000550552 ONECUT3O60422 494 aaPredicted RBP9.04□□□□□ -0.96
TMEM106C-215ENST00000550552 ARHGEF25Q86VW2 580 aa9.04□□□□□ -0.96
TMEM106C-215ENST00000550552 AXIN2Q9Y2T1 843 aa9.04□□□□□ -0.96
TMEM106C-215ENST00000550552 CRYBG1Q9Y4K1 1723 aa9.04□□□□□ -0.96
TMEM106C-215ENST00000550552 EDC4Q6P2E9 1401 aaKnown RBP9.04□□□□□ -0.96
TMEM106C-215ENST00000550552 ABCA3Q99758 1704 aa9.03□□□□□ -0.96
TMEM106C-215ENST00000550552 ANKRD36BQ8N2N9 1353 aa9.03□□□□□ -0.96
TMEM106C-215ENST00000550552 FYB1O15117 783 aa9.03□□□□□ -0.96
TMEM106C-215ENST00000550552 FBLN1P23142 703 aa9.03□□□□□ -0.96
TMEM106C-215ENST00000550552 CCDC9Q9Y3X0 531 aaKnown RBP9.03□□□□□ -0.96
TMEM106C-215ENST00000550552 RGS12O14924 1447 aa9.03□□□□□ -0.96
TMEM106C-215ENST00000550552 MARF1Q9Y4F3 1742 aaKnown RBP9.02□□□□□ -0.96
TMEM106C-215ENST00000550552 AKAP12Q02952 1782 aa9.02□□□□□ -0.97
TMEM106C-215ENST00000550552 PIK3C2AO00443 1686 aa9.02□□□□□ -0.97
TMEM106C-215ENST00000550552 ZBTB7CA1YPR0 619 aa9.02□□□□□ -0.97
TMEM106C-215ENST00000550552 LARP1Q6PKG0 1096 aaKnown RBP9.02□□□□□ -0.97
TMEM106C-215ENST00000550552 KCNH5Q8NCM2 988 aa9.02□□□□□ -0.97
TMEM106C-215ENST00000550552 POLR3GLQ9BT43 218 aa9.02□□□□□ -0.97
TMEM106C-215ENST00000550552 STRN4Q9NRL3 753 aa9.02□□□□□ -0.97
TMEM106C-215ENST00000550552 SPATA31A5Q5VU36 1347 aa9.02□□□□□ -0.97
TMEM106C-215ENST00000550552 SPATA31A7Q8IWB4 1347 aa9.02□□□□□ -0.97
TMEM106C-215ENST00000550552 CDK12Q9NYV4 1490 aaPredicted RBP9.02□□□□□ -0.97
TMEM106C-215ENST00000550552 AATKQ6ZMQ8 1374 aa9.01□□□□□ -0.97
TMEM106C-215ENST00000550552 SLIT3O75094 1523 aa9.01□□□□□ -0.97
TMEM106C-215ENST00000550552 CAMTA1Q9Y6Y1 1673 aa9.01□□□□□ -0.97
TMEM106C-215ENST00000550552 ADRA2BP18089 450 aa9.01□□□□□ -0.97
TMEM106C-215ENST00000550552 EVA1CP58658 441 aa9.01□□□□□ -0.97
TMEM106C-215ENST00000550552 NRKQ7Z2Y5 1582 aa9.01□□□□□ -0.97
TMEM106C-215ENST00000550552 GGNBP2Q9H3C7 697 aa9.01□□□□□ -0.97
TMEM106C-215ENST00000550552 PHRF1Q9P1Y6 1649 aaKnown RBP9.01□□□□□ -0.97
TMEM106C-215ENST00000550552 COL14A1Q05707 1796 aaKnown RBP9□□□□□ -0.97
TMEM106C-215ENST00000550552 FAM98CQ17RN3 349 aaKnown RBP9□□□□□ -0.97
TMEM106C-215ENST00000550552 SEPT12Q8IYM1 358 aa9□□□□□ -0.97
TMEM106C-215ENST00000550552 PANK3Q9H999 370 aa9□□□□□ -0.97
TMEM106C-215ENST00000550552 SPATA31A1Q5TZJ5 1347 aa9□□□□□ -0.97
TMEM106C-215ENST00000550552 EP400Q96L91 3159 aa9□□□□□ -0.97
TMEM106C-215ENST00000550552 MON2Q7Z3U7 1717 aa9□□□□□ -0.97
TMEM106C-215ENST00000550552 GLI3P10071 1580 aa8.99□□□□□ -0.97
TMEM106C-215ENST00000550552 OVOS2A0A0J9YW53 1432 aa8.99□□□□□ -0.97
TMEM106C-215ENST00000550552 OVOS2Q6IE36 1432 aa8.99□□□□□ -0.97
TMEM106C-215ENST00000550552 UPF1Q92900 1129 aaKnown RBP eCLIP8.99□□□□□ -0.97
TMEM106C-215ENST00000550552 COG3Q96JB2 828 aa8.99□□□□□ -0.97
TMEM106C-215ENST00000550552 USP35Q9P2H5 1018 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms