RNA–Protein interactions for RNA: ENST00000549709.5

CNOT2-219, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-219ENST00000549709 WASF2Q9Y6W5 498 aa7.06□□□□□ -1.28
CNOT2-219ENST00000549709 F12P00748 615 aaPredicted RBP7.05□□□□□ -1.28
CNOT2-219ENST00000549709 VARSP26640 1264 aaKnown RBP7.05□□□□□ -1.28
CNOT2-219ENST00000549709 GJA5P36382 358 aa7.05□□□□□ -1.28
CNOT2-219ENST00000549709 MTMR2Q13614 643 aa7.05□□□□□ -1.28
CNOT2-219ENST00000549709 C4orf48Q5BLP8 95 aa7.05□□□□□ -1.28
CNOT2-219ENST00000549709 RSBN1LQ6PCB5 846 aaPredicted RBP7.05□□□□□ -1.28
CNOT2-219ENST00000549709 NPAS3Q8IXF0 933 aa7.05□□□□□ -1.28
CNOT2-219ENST00000549709 TBC1D2Q9BYX2 928 aa7.05□□□□□ -1.28
CNOT2-219ENST00000549709 SPTLC1O15269 473 aa7.04□□□□□ -1.28
CNOT2-219ENST00000549709 NNTQ13423 1086 aa7.04□□□□□ -1.28
CNOT2-219ENST00000549709 FOXJ1Q92949 421 aa7.04□□□□□ -1.28
CNOT2-219ENST00000549709 CDK15Q96Q40 435 aa7.04□□□□□ -1.28
CNOT2-219ENST00000549709 BEGAINQ9BUH8 593 aa7.04□□□□□ -1.28
CNOT2-219ENST00000549709 SPDYE5A6NIY4 337 aa7.03□□□□□ -1.28
CNOT2-219ENST00000549709 SOBPA7XYQ1 873 aa7.03□□□□□ -1.28
CNOT2-219ENST00000549709 PER1O15534 1290 aaPredicted RBP7.03□□□□□ -1.28
CNOT2-219ENST00000549709 PARP9Q8IXQ6 854 aa7.03□□□□□ -1.28
CNOT2-219ENST00000549709 MAP10Q9P2G4 905 aa7.03□□□□□ -1.28
CNOT2-219ENST00000549709 TULP1O00294 542 aaPredicted RBP7.02□□□□□ -1.29
CNOT2-219ENST00000549709 NR3C2P08235 984 aa7.02□□□□□ -1.29
CNOT2-219ENST00000549709 HRCP23327 699 aa7.02□□□□□ -1.29
CNOT2-219ENST00000549709 GRM5P41594 1212 aa7.02□□□□□ -1.29
CNOT2-219ENST00000549709 MRPL14Q6P1L8 145 aaKnown RBP7.02□□□□□ -1.29
CNOT2-219ENST00000549709 KRI1Q8N9T8 703 aaKnown RBP7.02□□□□□ -1.29
CNOT2-219ENST00000549709 TRIM66O15016 1216 aa7.01□□□□□ -1.29
CNOT2-219ENST00000549709 CABLES1Q8TDN4 633 aa7.01□□□□□ -1.29
CNOT2-219ENST00000549709 TTLL12Q14166 644 aaPredicted RBP7□□□□□ -1.29
CNOT2-219ENST00000549709 SLC16A10Q8TF71 515 aa7□□□□□ -1.29
CNOT2-219ENST00000549709 IRF7Q92985 503 aa7□□□□□ -1.29
CNOT2-219ENST00000549709 ZFAND3Q9H8U3 227 aa7□□□□□ -1.29
CNOT2-219ENST00000549709 ADH1CP00326 375 aa6.99□□□□□ -1.29
CNOT2-219ENST00000549709 VSIG8P0DPA2 414 aa6.99□□□□□ -1.29
CNOT2-219ENST00000549709 WDR4P57081 412 aaKnown RBP6.99□□□□□ -1.29
CNOT2-219ENST00000549709 ZSCAN1Q8NBB4 408 aa6.99□□□□□ -1.29
CNOT2-219ENST00000549709 PURBQ96QR8 312 aaKnown RBP6.99□□□□□ -1.29
CNOT2-219ENST00000549709 ITPKCQ96DU7 683 aa6.98□□□□□ -1.29
CNOT2-219ENST00000549709 LIMD1Q9UGP4 676 aa6.98□□□□□ -1.29
CNOT2-219ENST00000549709 PLEKHG3A1L390 1219 aa6.97□□□□□ -1.29
CNOT2-219ENST00000549709 QPCTQ16769 361 aa6.97□□□□□ -1.29
CNOT2-219ENST00000549709 RIC3Q7Z5B4 369 aa6.97□□□□□ -1.29
CNOT2-219ENST00000549709 C1QTNF2Q9BXJ5 285 aa6.97□□□□□ -1.29
CNOT2-219ENST00000549709 CTHP32929 405 aa6.96□□□□□ -1.3
CNOT2-219ENST00000549709 GSK3AP49840 483 aa6.96□□□□□ -1.3
CNOT2-219ENST00000549709 PRPF38BQ5VTL8 546 aaKnown RBP6.96□□□□□ -1.3
CNOT2-219ENST00000549709 SH3RF1Q7Z6J0 888 aa6.96□□□□□ -1.3
CNOT2-219ENST00000549709 FAM174AQ8TBP5 190 aa6.96□□□□□ -1.3
CNOT2-219ENST00000549709 LILRB3O75022 631 aa6.95□□□□□ -1.3
CNOT2-219ENST00000549709 ZIC2O95409 532 aaPredicted RBP6.95□□□□□ -1.3
CNOT2-219ENST00000549709 RTL5Q5HYW3 569 aaPredicted RBP6.94□□□□□ -1.3
CNOT2-219ENST00000549709 MYSM1Q5VVJ2 828 aa6.94□□□□□ -1.3
CNOT2-219ENST00000549709 ZBTB3Q9H5J0 574 aa6.94□□□□□ -1.3
CNOT2-219ENST00000549709 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
CNOT2-219ENST00000549709 NR5A1Q13285 461 aa6.93□□□□□ -1.3
CNOT2-219ENST00000549709 TUSC1Q2TAM9 212 aa6.93□□□□□ -1.3
CNOT2-219ENST00000549709 FBXO31Q5XUX0 539 aaPredicted RBP6.93□□□□□ -1.3
CNOT2-219ENST00000549709 SH3BP5LQ7L8J4 393 aa6.93□□□□□ -1.3
CNOT2-219ENST00000549709 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
CNOT2-219ENST00000549709 KRT76Q01546 638 aa6.92□□□□□ -1.3
CNOT2-219ENST00000549709 SCARF1Q14162 830 aa6.92□□□□□ -1.3
CNOT2-219ENST00000549709 MEIOBQ8N635 442 aa6.92□□□□□ -1.3
CNOT2-219ENST00000549709 GPR161Q8N6U8 529 aaKnown RBP6.92□□□□□ -1.3
CNOT2-219ENST00000549709 SOS2Q07890 1332 aaPredicted RBP6.92□□□□□ -1.3
CNOT2-219ENST00000549709 PPFIA3O75145 1194 aa6.91□□□□□ -1.3
CNOT2-219ENST00000549709 ARID5BQ14865 1188 aa6.91□□□□□ -1.3
CNOT2-219ENST00000549709 DIXDC1Q155Q3 683 aa6.91□□□□□ -1.3
CNOT2-219ENST00000549709 AK7Q96M32 723 aa6.91□□□□□ -1.3
CNOT2-219ENST00000549709 DNMT3LQ9UJW3 386 aa6.91□□□□□ -1.3
CNOT2-219ENST00000549709 CSPP1Q1MSJ5 1256 aa6.9□□□□□ -1.3
CNOT2-219ENST00000549709 C6orf118Q5T5N4 469 aa6.9□□□□□ -1.3
CNOT2-219ENST00000549709 TRMT44Q8IYL2 757 aaKnown RBP6.9□□□□□ -1.3
CNOT2-219ENST00000549709 BPHLQ86WA6 291 aaPredicted RBP6.89□□□□□ -1.31
CNOT2-219ENST00000549709 MAP4K5Q9Y4K4 846 aa6.89□□□□□ -1.31
CNOT2-219ENST00000549709 PDE4DQ08499 809 aa6.88□□□□□ -1.31
CNOT2-219ENST00000549709 LINC00528Q8N1L1 170 aa6.88□□□□□ -1.31
CNOT2-219ENST00000549709 OCSTAMPQ9BR26 566 aa6.87□□□□□ -1.31
CNOT2-219ENST00000549709 FAM181BA6NEQ2 426 aa6.86□□□□□ -1.31
CNOT2-219ENST00000549709 MAN1A2O60476 641 aa6.86□□□□□ -1.31
CNOT2-219ENST00000549709 BMP2P12643 396 aa6.85□□□□□ -1.31
CNOT2-219ENST00000549709 FSHRP23945 695 aa6.85□□□□□ -1.31
CNOT2-219ENST00000549709 CTDSPL2Q05D32 466 aa6.85□□□□□ -1.31
CNOT2-219ENST00000549709 ERFEQ4G0M1 354 aa6.85□□□□□ -1.31
CNOT2-219ENST00000549709 KCNMA1Q12791 1236 aa6.84□□□□□ -1.31
CNOT2-219ENST00000549709 CBLBQ13191 982 aa6.84□□□□□ -1.31
CNOT2-219ENST00000549709 AGERQ15109 404 aa6.84□□□□□ -1.31
CNOT2-219ENST00000549709 Q6ZVU0 165 aa6.84□□□□□ -1.31
CNOT2-219ENST00000549709 NUTM2BA6NNL0 878 aaPredicted RBP6.82□□□□□ -1.32
CNOT2-219ENST00000549709 NUTM2EB1AL46 878 aaPredicted RBP6.82□□□□□ -1.32
CNOT2-219ENST00000549709 PTSQ03393 145 aa6.82□□□□□ -1.32
CNOT2-219ENST00000549709 RNFT1Q5M7Z0 435 aa6.82□□□□□ -1.32
CNOT2-219ENST00000549709 PPP1R26Q5T8A7 1209 aaPredicted RBP6.82□□□□□ -1.32
CNOT2-219ENST00000549709 NUTM2DQ5VT03 806 aaPredicted RBP6.82□□□□□ -1.32
CNOT2-219ENST00000549709 VASH1Q7L8A9 365 aaPredicted RBP6.82□□□□□ -1.32
CNOT2-219ENST00000549709 NUTM2AQ8IVF1 878 aaPredicted RBP6.82□□□□□ -1.32
CNOT2-219ENST00000549709 ARMC2Q8NEN0 867 aa6.82□□□□□ -1.32
CNOT2-219ENST00000549709 TSC1Q92574 1164 aa6.82□□□□□ -1.32
CNOT2-219ENST00000549709 TSEN34Q9BSV6 310 aaKnown RBP6.82□□□□□ -1.32
CNOT2-219ENST00000549709 SLC24A3Q9HC58 644 aa6.82□□□□□ -1.32
CNOT2-219ENST00000549709 SPINT1O43278 529 aa6.81□□□□□ -1.32
CNOT2-219ENST00000549709 CCDC116Q8IYX3 515 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms