RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ZNF692Q9BU19 519 aaPredicted RBP13.19□□□□□ -0.3
RAB5B-206ENST00000549505 RGPD1P0DJD0 1748 aa13.18□□□□□ -0.3
RAB5B-206ENST00000549505 OVOS2A0A0J9YW53 1432 aa13.17□□□□□ -0.3
RAB5B-206ENST00000549505 OVOS2Q6IE36 1432 aa13.17□□□□□ -0.3
RAB5B-206ENST00000549505 WAPLQ7Z5K2 1190 aa13.17□□□□□ -0.3
RAB5B-206ENST00000549505 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
RAB5B-206ENST00000549505 USP31Q70CQ4 1352 aa13.17□□□□□ -0.3
RAB5B-206ENST00000549505 CABP1Q9NZU7 370 aa13.17□□□□□ -0.3
RAB5B-206ENST00000549505 EID1Q9Y6B2 187 aa13.16□□□□□ -0.3
RAB5B-206ENST00000549505 CNGB1Q14028 1251 aaPredicted RBP13.16□□□□□ -0.3
RAB5B-206ENST00000549505 MARF1Q9Y4F3 1742 aaKnown RBP13.16□□□□□ -0.3
RAB5B-206ENST00000549505 IL16Q14005 1332 aa13.16□□□□□ -0.3
RAB5B-206ENST00000549505 PRR36Q9H6K5 1346 aa13.16□□□□□ -0.3
RAB5B-206ENST00000549505 WWC1Q8IX03 1113 aa13.15□□□□□ -0.3
RAB5B-206ENST00000549505 NUDT16Q96DE0 195 aaKnown RBP13.15□□□□□ -0.3
RAB5B-206ENST00000549505 MAP2P11137 1827 aaKnown RBP13.15□□□□□ -0.3
RAB5B-206ENST00000549505 USP6P35125 1406 aa13.15□□□□□ -0.31
RAB5B-206ENST00000549505 APAF1O14727 1248 aa13.14□□□□□ -0.31
RAB5B-206ENST00000549505 TXNDC2Q86VQ3 553 aa13.14□□□□□ -0.31
RAB5B-206ENST00000549505 CT47B1P0C2W7 299 aaPredicted RBP13.14□□□□□ -0.31
RAB5B-206ENST00000549505 PNNQ9H307 717 aaKnown RBP13.13□□□□□ -0.31
RAB5B-206ENST00000549505 SETD1BQ9UPS6 1966 aaKnown RBP13.12□□□□□ -0.31
RAB5B-206ENST00000549505 PHRF1Q9P1Y6 1649 aaKnown RBP13.12□□□□□ -0.31
RAB5B-206ENST00000549505 BCANQ96GW7 911 aa13.12□□□□□ -0.31
RAB5B-206ENST00000549505 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
RAB5B-206ENST00000549505 TTC21AQ8NDW8 1320 aa13.11□□□□□ -0.31
RAB5B-206ENST00000549505 SAFB2Q14151 953 aaKnown RBP eCLIP13.11□□□□□ -0.31
RAB5B-206ENST00000549505 KIF24Q5T7B8 1368 aa13.1□□□□□ -0.31
RAB5B-206ENST00000549505 FCHSD2O94868 740 aa13.1□□□□□ -0.31
RAB5B-206ENST00000549505 AAMPQ13685 434 aa13.1□□□□□ -0.31
RAB5B-206ENST00000549505 TCP11L2Q8N4U5 519 aa13.1□□□□□ -0.31
RAB5B-206ENST00000549505 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
RAB5B-206ENST00000549505 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
RAB5B-206ENST00000549505 CEBPAP49715 358 aaPredicted RBP13.1□□□□□ -0.31
RAB5B-206ENST00000549505 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
RAB5B-206ENST00000549505 PIK3C2AO00443 1686 aa13.1□□□□□ -0.31
RAB5B-206ENST00000549505 MST1RQ04912 1400 aa13.09□□□□□ -0.31
RAB5B-206ENST00000549505 GGNBP2Q9H3C7 697 aa13.09□□□□□ -0.31
RAB5B-206ENST00000549505 IRX6P78412 446 aaPredicted RBP13.09□□□□□ -0.31
RAB5B-206ENST00000549505 CCDC146Q8IYE0 955 aa13.08□□□□□ -0.32
RAB5B-206ENST00000549505 DIAPH1O60610 1272 aaKnown RBP13.07□□□□□ -0.32
RAB5B-206ENST00000549505 AMOTL2Q9Y2J4 779 aa13.07□□□□□ -0.32
RAB5B-206ENST00000549505 IL13P35225 146 aa13.07□□□□□ -0.32
RAB5B-206ENST00000549505 PDE3AQ14432 1141 aa13.07□□□□□ -0.32
RAB5B-206ENST00000549505 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.07□□□□□ -0.32
RAB5B-206ENST00000549505 TTC21BQ7Z4L5 1316 aa13.07□□□□□ -0.32
RAB5B-206ENST00000549505 RSPH6AQ9H0K4 717 aa13.06□□□□□ -0.32
RAB5B-206ENST00000549505 DMRT2Q9Y5R5 561 aa13.06□□□□□ -0.32
RAB5B-206ENST00000549505 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
RAB5B-206ENST00000549505 RGPD8O14715 1765 aaPredicted RBP13.06□□□□□ -0.32
RAB5B-206ENST00000549505 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
RAB5B-206ENST00000549505 BRPF1P55201 1214 aaPredicted RBP13.05□□□□□ -0.32
RAB5B-206ENST00000549505 EXOC6Q8TAG9 804 aa13.05□□□□□ -0.32
RAB5B-206ENST00000549505 TMPOP42166 694 aaKnown RBP13.04□□□□□ -0.32
RAB5B-206ENST00000549505 B4GALNT3Q6L9W6 998 aa13.04□□□□□ -0.32
RAB5B-206ENST00000549505 ADGRL3Q9HAR2 1447 aa13.04□□□□□ -0.32
RAB5B-206ENST00000549505 NCOA3Q9Y6Q9 1424 aa13.04□□□□□ -0.32
RAB5B-206ENST00000549505 MYH16Q9H6N6 1097 aa13.04□□□□□ -0.32
RAB5B-206ENST00000549505 ACEP12821 1306 aa13.03□□□□□ -0.32
RAB5B-206ENST00000549505 FANCIQ9NVI1 1328 aa13.03□□□□□ -0.32
RAB5B-206ENST00000549505 NPHP4O75161 1426 aaPredicted RBP13.03□□□□□ -0.32
RAB5B-206ENST00000549505 CCDC136Q96JN2 1154 aa13.02□□□□□ -0.32
RAB5B-206ENST00000549505 U2AF1L5P0DN76 240 aaPredicted RBP13.02□□□□□ -0.33
RAB5B-206ENST00000549505 U2AF1Q01081 240 aaKnown RBP eCLIP13.02□□□□□ -0.33
RAB5B-206ENST00000549505 ZNF428Q96B54 188 aa13.02□□□□□ -0.33
RAB5B-206ENST00000549505 COG3Q96JB2 828 aa13.02□□□□□ -0.33
RAB5B-206ENST00000549505 KIF1AQ12756 1690 aa13.02□□□□□ -0.33
RAB5B-206ENST00000549505 ANKLE2Q86XL3 938 aa13.02□□□□□ -0.33
RAB5B-206ENST00000549505 NME9Q86XW9 330 aa13.02□□□□□ -0.33
RAB5B-206ENST00000549505 LRRC37A3O60309 1634 aa13.01□□□□□ -0.33
RAB5B-206ENST00000549505 MS4A1P11836 297 aa13.01□□□□□ -0.33
RAB5B-206ENST00000549505 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
RAB5B-206ENST00000549505 DLG5Q8TDM6 1919 aa13.01□□□□□ -0.33
RAB5B-206ENST00000549505 RARSP54136 660 aaKnown RBP13.01□□□□□ -0.33
RAB5B-206ENST00000549505 ANP32EQ9BTT0 268 aa13.01□□□□□ -0.33
RAB5B-206ENST00000549505 SALL2Q9Y467 1007 aaPredicted RBP13.01□□□□□ -0.33
RAB5B-206ENST00000549505 ARHGEF10O15013 1369 aa13.01□□□□□ -0.33
RAB5B-206ENST00000549505 LMTK3Q96Q04 1460 aa13□□□□□ -0.33
RAB5B-206ENST00000549505 KDRP35968 1356 aa13□□□□□ -0.33
RAB5B-206ENST00000549505 TNNT2P45379 298 aaPredicted RBP13□□□□□ -0.33
RAB5B-206ENST00000549505 CRBNQ96SW2 442 aa13□□□□□ -0.33
RAB5B-206ENST00000549505 RBM19Q9Y4C8 960 aaKnown RBP13□□□□□ -0.33
RAB5B-206ENST00000549505 TRPM3Q9HCF6 1732 aaPredicted RBP12.99□□□□□ -0.33
RAB5B-206ENST00000549505 CAMTA1Q9Y6Y1 1673 aa12.99□□□□□ -0.33
RAB5B-206ENST00000549505 RTL1A6NKG5 1358 aa12.99□□□□□ -0.33
RAB5B-206ENST00000549505 ZNF853P0CG23 659 aa12.99□□□□□ -0.33
RAB5B-206ENST00000549505 SLC26A8Q96RN1 970 aa12.99□□□□□ -0.33
RAB5B-206ENST00000549505 NFAT5O94916 1531 aa12.99□□□□□ -0.33
RAB5B-206ENST00000549505 SBNO1A3KN83 1393 aa12.99□□□□□ -0.33
RAB5B-206ENST00000549505 SLIT3O75094 1523 aa12.99□□□□□ -0.33
RAB5B-206ENST00000549505 TCERG1O14776 1098 aaKnown RBP12.98□□□□□ -0.33
RAB5B-206ENST00000549505 NFE2L2Q16236 605 aa12.98□□□□□ -0.33
RAB5B-206ENST00000549505 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
RAB5B-206ENST00000549505 KCNA6P17658 529 aa12.97□□□□□ -0.33
RAB5B-206ENST00000549505 DCCP43146 1447 aa12.97□□□□□ -0.33
RAB5B-206ENST00000549505 NCAPD2Q15021 1401 aa12.97□□□□□ -0.33
RAB5B-206ENST00000549505 CALD1Q05682 793 aaKnown RBP12.97□□□□□ -0.33
RAB5B-206ENST00000549505 C20orf194Q5TEA3 1177 aa12.97□□□□□ -0.33
RAB5B-206ENST00000549505 CENPQQ7L2Z9 268 aaPredicted RBP12.97□□□□□ -0.33
RAB5B-206ENST00000549505 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms