RNA–Protein interactions for RNA: ENST00000548896.1

HECTD4-208, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HECTD4, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-208ENST00000548896 GTF3C3Q9Y5Q9 886 aa13.22□□□□□ -0.29
HECTD4-208ENST00000548896 KIF21BO75037 1637 aa13.21□□□□□ -0.29
HECTD4-208ENST00000548896 REPIN1Q9BWE0 567 aaKnown RBP13.21□□□□□ -0.29
HECTD4-208ENST00000548896 FAM217BQ9NTX9 383 aaPredicted RBP13.2□□□□□ -0.3
HECTD4-208ENST00000548896 CTTNBP2Q8WZ74 1663 aa13.2□□□□□ -0.3
HECTD4-208ENST00000548896 ATP10BO94823 1461 aa13.19□□□□□ -0.3
HECTD4-208ENST00000548896 ADH1BP00325 375 aa13.19□□□□□ -0.3
HECTD4-208ENST00000548896 SLC27A5Q9Y2P5 690 aa13.19□□□□□ -0.3
HECTD4-208ENST00000548896 NEO1Q92859 1461 aa13.18□□□□□ -0.3
HECTD4-208ENST00000548896 GRIPAP1Q4V328 841 aa13.18□□□□□ -0.3
HECTD4-208ENST00000548896 PRKD2Q9BZL6 878 aa13.18□□□□□ -0.3
HECTD4-208ENST00000548896 RNF223E7ERA6 249 aa13.17□□□□□ -0.3
HECTD4-208ENST00000548896 KDM4AO75164 1064 aa13.17□□□□□ -0.3
HECTD4-208ENST00000548896 SPSB2Q99619 263 aa13.17□□□□□ -0.3
HECTD4-208ENST00000548896 S1PR4O95977 384 aa13.16□□□□□ -0.3
HECTD4-208ENST00000548896 AMHR2Q16671 573 aa13.16□□□□□ -0.3
HECTD4-208ENST00000548896 THAP11Q96EK4 314 aa13.16□□□□□ -0.3
HECTD4-208ENST00000548896 PTPRMP28827 1452 aa13.16□□□□□ -0.3
HECTD4-208ENST00000548896 ABCA9Q8IUA7 1624 aa13.15□□□□□ -0.3
HECTD4-208ENST00000548896 IRX2Q9BZI1 471 aaPredicted RBP13.15□□□□□ -0.3
HECTD4-208ENST00000548896 SLC6A16Q9GZN6 736 aa13.15□□□□□ -0.3
HECTD4-208ENST00000548896 ADAMTSL3P82987 1691 aa13.15□□□□□ -0.31
HECTD4-208ENST00000548896 PPEF1O14829 653 aaPredicted RBP13.14□□□□□ -0.31
HECTD4-208ENST00000548896 SSTR3P32745 418 aaPredicted RBP13.14□□□□□ -0.31
HECTD4-208ENST00000548896 SALL2Q9Y467 1007 aaPredicted RBP13.14□□□□□ -0.31
HECTD4-208ENST00000548896 V9GY48 417 aaPredicted RBP13.14□□□□□ -0.31
HECTD4-208ENST00000548896 AK7Q96M32 723 aa13.13□□□□□ -0.31
HECTD4-208ENST00000548896 TRIM66O15016 1216 aa13.12□□□□□ -0.31
HECTD4-208ENST00000548896 RAPGEF3O95398 923 aa13.12□□□□□ -0.31
HECTD4-208ENST00000548896 FMNL1O95466 1100 aaPredicted RBP13.12□□□□□ -0.31
HECTD4-208ENST00000548896 TTLL12Q14166 644 aaPredicted RBP13.12□□□□□ -0.31
HECTD4-208ENST00000548896 BRICD5Q6PL45 260 aa13.12□□□□□ -0.31
HECTD4-208ENST00000548896 ANKLE1Q8NAG6 615 aa13.12□□□□□ -0.31
HECTD4-208ENST00000548896 UBTFP17480 764 aaKnown RBP13.11□□□□□ -0.31
HECTD4-208ENST00000548896 USP46P62068 366 aa13.11□□□□□ -0.31
HECTD4-208ENST00000548896 FAM160A2Q8N612 972 aaPredicted RBP13.09□□□□□ -0.31
HECTD4-208ENST00000548896 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.32
HECTD4-208ENST00000548896 HOXA2O43364 376 aa13.07□□□□□ -0.32
HECTD4-208ENST00000548896 GIGYF2Q6Y7W6 1299 aaKnown RBP13.07□□□□□ -0.32
HECTD4-208ENST00000548896 RNF19BQ6ZMZ0 732 aa13.07□□□□□ -0.32
HECTD4-208ENST00000548896 NUTM1Q86Y26 1132 aa13.07□□□□□ -0.32
HECTD4-208ENST00000548896 HLA-CQ95604 372 aa13.07□□□□□ -0.32
HECTD4-208ENST00000548896 SLC24A3Q9HC58 644 aa13.07□□□□□ -0.32
HECTD4-208ENST00000548896 BCORL1Q5H9F3 1711 aa13.07□□□□□ -0.32
HECTD4-208ENST00000548896 PCF11O94913 1555 aaKnown RBP13.07□□□□□ -0.32
HECTD4-208ENST00000548896 SAMD9Q5K651 1589 aa13.07□□□□□ -0.32
HECTD4-208ENST00000548896 FHOD3Q2V2M9 1422 aa13.06□□□□□ -0.32
HECTD4-208ENST00000548896 EIF5BO60841 1220 aaKnown RBP13.06□□□□□ -0.32
HECTD4-208ENST00000548896 Q3C1V9 767 aa13.06□□□□□ -0.32
HECTD4-208ENST00000548896 EMID1Q96A84 441 aaPredicted RBP13.06□□□□□ -0.32
HECTD4-208ENST00000548896 ARID4BQ4LE39 1312 aaPredicted RBP13.06□□□□□ -0.32
HECTD4-208ENST00000548896 SLC19A1P41440 591 aa13.05□□□□□ -0.32
HECTD4-208ENST00000548896 RAPGEF6Q8TEU7 1601 aa13.05□□□□□ -0.32
HECTD4-208ENST00000548896 POGZQ7Z3K3 1410 aa13.05□□□□□ -0.32
HECTD4-208ENST00000548896 DENND4BO75064 1496 aaPredicted RBP13.04□□□□□ -0.32
HECTD4-208ENST00000548896 LMTK3Q96Q04 1460 aa13.04□□□□□ -0.32
HECTD4-208ENST00000548896 ARID3CA6NKF2 412 aa13.04□□□□□ -0.32
HECTD4-208ENST00000548896 PARP9Q8IXQ6 854 aa13.04□□□□□ -0.32
HECTD4-208ENST00000548896 PODXL2Q9NZ53 605 aa13.04□□□□□ -0.32
HECTD4-208ENST00000548896 NUP153P49790 1475 aaKnown RBP13.04□□□□□ -0.32
HECTD4-208ENST00000548896 MAGI2Q86UL8 1455 aa13.04□□□□□ -0.32
HECTD4-208ENST00000548896 AKNAQ7Z591 1439 aa13.03□□□□□ -0.32
HECTD4-208ENST00000548896 FRMPD1Q5SYB0 1578 aa13.03□□□□□ -0.32
HECTD4-208ENST00000548896 MSS51Q4VC12 460 aa13.02□□□□□ -0.33
HECTD4-208ENST00000548896 LIAT1Q6ZQX7 453 aa13.02□□□□□ -0.33
HECTD4-208ENST00000548896 GUCA2AQ02747 115 aa13.01□□□□□ -0.33
HECTD4-208ENST00000548896 PLA2G2CQ5R387 149 aa13.01□□□□□ -0.33
HECTD4-208ENST00000548896 SPIRE2Q8WWL2 714 aa13.01□□□□□ -0.33
HECTD4-208ENST00000548896 MADDQ8WXG6 1647 aa13□□□□□ -0.33
HECTD4-208ENST00000548896 ARHGEF40Q8TER5 1519 aa13□□□□□ -0.33
HECTD4-208ENST00000548896 PDE4DQ08499 809 aa13□□□□□ -0.33
HECTD4-208ENST00000548896 BEGAINQ9BUH8 593 aa13□□□□□ -0.33
HECTD4-208ENST00000548896 PRDM9Q9NQV7 894 aa13□□□□□ -0.33
HECTD4-208ENST00000548896 FANCAO15360 1455 aa12.99□□□□□ -0.33
HECTD4-208ENST00000548896 GFRA3O60609 400 aa12.99□□□□□ -0.33
HECTD4-208ENST00000548896 SPRYD7Q5W111 196 aa12.99□□□□□ -0.33
HECTD4-208ENST00000548896 USB1Q9BQ65 265 aaKnown RBP12.99□□□□□ -0.33
HECTD4-208ENST00000548896 CFAP74Q9C0B2 1584 aa12.98□□□□□ -0.33
HECTD4-208ENST00000548896 EFCAB5A4FU69 1503 aa12.98□□□□□ -0.33
HECTD4-208ENST00000548896 ZMYM4Q5VZL5 1548 aa12.98□□□□□ -0.33
HECTD4-208ENST00000548896 MS4A1P11836 297 aa12.98□□□□□ -0.33
HECTD4-208ENST00000548896 RICTORQ6R327 1708 aa12.97□□□□□ -0.33
HECTD4-208ENST00000548896 LAPTM4AQ15012 233 aa12.97□□□□□ -0.33
HECTD4-208ENST00000548896 FCF1Q9Y324 198 aaKnown RBP12.97□□□□□ -0.33
HECTD4-208ENST00000548896 FDX1P10109 184 aa12.96□□□□□ -0.33
HECTD4-208ENST00000548896 ZNF598Q86UK7 904 aaKnown RBP12.96□□□□□ -0.33
HECTD4-208ENST00000548896 SYMPKQ92797 1274 aaKnown RBP12.96□□□□□ -0.33
HECTD4-208ENST00000548896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.95□□□□□ -0.34
HECTD4-208ENST00000548896 NDUFV2P19404 249 aa12.95□□□□□ -0.34
HECTD4-208ENST00000548896 PCDHGC3Q9UN70 934 aa12.95□□□□□ -0.34
HECTD4-208ENST00000548896 PLCH2O75038 1416 aa12.95□□□□□ -0.34
HECTD4-208ENST00000548896 MOXD2PA6NHM9 499 aa12.94□□□□□ -0.34
HECTD4-208ENST00000548896 MMP16P51512 607 aa12.94□□□□□ -0.34
HECTD4-208ENST00000548896 ZFYVE16Q7Z3T8 1539 aa12.93□□□□□ -0.34
HECTD4-208ENST00000548896 HSPA2P54652 639 aa12.92□□□□□ -0.34
HECTD4-208ENST00000548896 TMEM132AQ24JP5 1023 aa12.92□□□□□ -0.34
HECTD4-208ENST00000548896 EFCAB2Q5VUJ9 269 aa12.92□□□□□ -0.34
HECTD4-208ENST00000548896 TBC1D2Q9BYX2 928 aa12.92□□□□□ -0.34
HECTD4-208ENST00000548896 PDZRN3Q9UPQ7 1066 aa12.92□□□□□ -0.34
HECTD4-208ENST00000548896 RIMS1Q86UR5 1692 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms