RNA–Protein interactions for RNA: ENST00000548878.6

ARPC3-208, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

TSL 5

Gene ARPC3, Length 532 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-208ENST00000548878 LINC01559Q495D7 138 aa10.3□□□□□ -0.76
ARPC3-208ENST00000548878 ZBTB3Q9H5J0 574 aa10.3□□□□□ -0.76
ARPC3-208ENST00000548878 PCDHB15Q9Y5E8 787 aa10.3□□□□□ -0.76
ARPC3-208ENST00000548878 INSM1Q01101 510 aaPredicted RBP10.29□□□□□ -0.76
ARPC3-208ENST00000548878 CTHP32929 405 aa10.28□□□□□ -0.76
ARPC3-208ENST00000548878 TRIM46Q7Z4K8 759 aa10.28□□□□□ -0.76
ARPC3-208ENST00000548878 RIC3Q7Z5B4 369 aa10.28□□□□□ -0.76
ARPC3-208ENST00000548878 CFAP99D6REC4 459 aa10.27□□□□□ -0.77
ARPC3-208ENST00000548878 HRCP23327 699 aa10.27□□□□□ -0.77
ARPC3-208ENST00000548878 STK17AQ9UEE5 414 aa10.27□□□□□ -0.77
ARPC3-208ENST00000548878 TUSC1Q2TAM9 212 aa10.26□□□□□ -0.77
ARPC3-208ENST00000548878 NPAS3Q8IXF0 933 aa10.26□□□□□ -0.77
ARPC3-208ENST00000548878 FAM174AQ8TBP5 190 aa10.26□□□□□ -0.77
ARPC3-208ENST00000548878 TLL2Q9Y6L7 1015 aa10.26□□□□□ -0.77
ARPC3-208ENST00000548878 SLC16A10Q8TF71 515 aa10.25□□□□□ -0.77
ARPC3-208ENST00000548878 F12P00748 615 aaPredicted RBP10.24□□□□□ -0.77
ARPC3-208ENST00000548878 BMP1P13497 986 aa10.24□□□□□ -0.77
ARPC3-208ENST00000548878 NNTQ13423 1086 aa10.24□□□□□ -0.77
ARPC3-208ENST00000548878 NXF1Q9UBU9 619 aaKnown RBP10.24□□□□□ -0.77
ARPC3-208ENST00000548878 CDK15Q96Q40 435 aa10.23□□□□□ -0.77
ARPC3-208ENST00000548878 ADH1CP00326 375 aa10.21□□□□□ -0.77
ARPC3-208ENST00000548878 PDE4DQ08499 809 aa10.21□□□□□ -0.77
ARPC3-208ENST00000548878 LCE2CQ5TA81 110 aa10.21□□□□□ -0.77
ARPC3-208ENST00000548878 CABLES1Q8TDN4 633 aa10.21□□□□□ -0.77
ARPC3-208ENST00000548878 MYSM1Q5VVJ2 828 aa10.2□□□□□ -0.78
ARPC3-208ENST00000548878 ARMC2Q8NEN0 867 aa10.2□□□□□ -0.78
ARPC3-208ENST00000548878 MAP10Q9P2G4 905 aa10.2□□□□□ -0.78
ARPC3-208ENST00000548878 SCARF1Q14162 830 aa10.19□□□□□ -0.78
ARPC3-208ENST00000548878 FOXJ1Q92949 421 aa10.19□□□□□ -0.78
ARPC3-208ENST00000548878 ZFP42Q96MM3 310 aa10.19□□□□□ -0.78
ARPC3-208ENST00000548878 KLF16Q9BXK1 252 aaPredicted RBP10.19□□□□□ -0.78
ARPC3-208ENST00000548878 NUTM2BA6NNL0 878 aaPredicted RBP10.18□□□□□ -0.78
ARPC3-208ENST00000548878 NUTM2EB1AL46 878 aaPredicted RBP10.18□□□□□ -0.78
ARPC3-208ENST00000548878 LILRB3O75022 631 aa10.18□□□□□ -0.78
ARPC3-208ENST00000548878 TIMP2P16035 220 aa10.18□□□□□ -0.78
ARPC3-208ENST00000548878 WDR4P57081 412 aaKnown RBP10.18□□□□□ -0.78
ARPC3-208ENST00000548878 NR5A1Q13285 461 aa10.18□□□□□ -0.78
ARPC3-208ENST00000548878 CSPP1Q1MSJ5 1256 aa10.18□□□□□ -0.78
ARPC3-208ENST00000548878 NUTM2DQ5VT03 806 aaPredicted RBP10.18□□□□□ -0.78
ARPC3-208ENST00000548878 MRPL14Q6P1L8 145 aaKnown RBP10.18□□□□□ -0.78
ARPC3-208ENST00000548878 BPHLQ86WA6 291 aaPredicted RBP10.18□□□□□ -0.78
ARPC3-208ENST00000548878 NUTM2AQ8IVF1 878 aaPredicted RBP10.18□□□□□ -0.78
ARPC3-208ENST00000548878 LIMD1Q9UGP4 676 aa10.18□□□□□ -0.78
ARPC3-208ENST00000548878 IRF7Q92985 503 aa10.17□□□□□ -0.78
ARPC3-208ENST00000548878 PER1O15534 1290 aaPredicted RBP10.16□□□□□ -0.78
ARPC3-208ENST00000548878 H3BM21 787 aa10.15□□□□□ -0.78
ARPC3-208ENST00000548878 AGERQ15109 404 aa10.15□□□□□ -0.78
ARPC3-208ENST00000548878 QPCTQ16769 361 aa10.15□□□□□ -0.78
ARPC3-208ENST00000548878 RSPH6AQ9H0K4 717 aa10.15□□□□□ -0.78
ARPC3-208ENST00000548878 ARID5BQ14865 1188 aa10.14□□□□□ -0.79
ARPC3-208ENST00000548878 HELBQ8NG08 1087 aaPredicted RBP10.14□□□□□ -0.79
ARPC3-208ENST00000548878 GRM5P41594 1212 aa10.13□□□□□ -0.79
ARPC3-208ENST00000548878 C4orf48Q5BLP8 95 aa10.13□□□□□ -0.79
ARPC3-208ENST00000548878 NBPF14Q5TI25 921 aa10.13□□□□□ -0.79
ARPC3-208ENST00000548878 TSC1Q92574 1164 aa10.13□□□□□ -0.79
ARPC3-208ENST00000548878 PURBQ96QR8 312 aaKnown RBP10.12□□□□□ -0.79
ARPC3-208ENST00000548878 C1QTNF2Q9BXJ5 285 aa10.12□□□□□ -0.79
ARPC3-208ENST00000548878 SLC24A3Q9HC58 644 aa10.12□□□□□ -0.79
ARPC3-208ENST00000548878 FAM181BA6NEQ2 426 aa10.11□□□□□ -0.79
ARPC3-208ENST00000548878 ZIC2O95409 532 aaPredicted RBP10.11□□□□□ -0.79
ARPC3-208ENST00000548878 GMPRP36959 345 aa10.11□□□□□ -0.79
ARPC3-208ENST00000548878 CLK2P49760 499 aaKnown RBP10.11□□□□□ -0.79
ARPC3-208ENST00000548878 SH3RF1Q7Z6J0 888 aa10.11□□□□□ -0.79
ARPC3-208ENST00000548878 GPKOWQ92917 476 aaPredicted RBP eCLIP10.11□□□□□ -0.791e-6■□□□□ 8.1
ARPC3-208ENST00000548878 MAP4K5Q9Y4K4 846 aa10.11□□□□□ -0.79
ARPC3-208ENST00000548878 RTL5Q5HYW3 569 aaPredicted RBP10.1□□□□□ -0.79
ARPC3-208ENST00000548878 TRMT44Q8IYL2 757 aaKnown RBP10.1□□□□□ -0.79
ARPC3-208ENST00000548878 NR3C2P08235 984 aa10.09□□□□□ -0.79
ARPC3-208ENST00000548878 SH3BP5LQ7L8J4 393 aa10.09□□□□□ -0.79
ARPC3-208ENST00000548878 ITPKCQ96DU7 683 aa10.09□□□□□ -0.79
ARPC3-208ENST00000548878 ZFAND3Q9H8U3 227 aa10.08□□□□□ -0.8
ARPC3-208ENST00000548878 UPP2O95045 317 aa10.07□□□□□ -0.8
ARPC3-208ENST00000548878 VEGFBP49765 207 aa10.07□□□□□ -0.8
ARPC3-208ENST00000548878 ZSCAN1Q8NBB4 408 aa10.05□□□□□ -0.8
ARPC3-208ENST00000548878 ERBB4Q15303 1308 aa10.05□□□□□ -0.8
ARPC3-208ENST00000548878 MAN1A2O60476 641 aa10.04□□□□□ -0.8
ARPC3-208ENST00000548878 VSIG8P0DPA2 414 aa10.04□□□□□ -0.8
ARPC3-208ENST00000548878 VASH1Q7L8A9 365 aaPredicted RBP10.04□□□□□ -0.8
ARPC3-208ENST00000548878 MEIOBQ8N635 442 aa10.04□□□□□ -0.8
ARPC3-208ENST00000548878 POLR3EQ9NVU0 708 aa10.04□□□□□ -0.8
ARPC3-208ENST00000548878 EMILIN1Q9Y6C2 1016 aa10.04□□□□□ -0.8
ARPC3-208ENST00000548878 FSHRP23945 695 aa10.03□□□□□ -0.8
ARPC3-208ENST00000548878 LINC00528Q8N1L1 170 aa10.03□□□□□ -0.8
ARPC3-208ENST00000548878 MAGEB6P1A0A0J9YX57 407 aa10.02□□□□□ -0.81
ARPC3-208ENST00000548878 BMP2P12643 396 aa10.02□□□□□ -0.81
ARPC3-208ENST00000548878 LORP23490 312 aaPredicted RBP10.02□□□□□ -0.81
ARPC3-208ENST00000548878 C6orf118Q5T5N4 469 aa10.02□□□□□ -0.81
ARPC3-208ENST00000548878 PDXDC2PQ6P474 469 aa10.02□□□□□ -0.81
ARPC3-208ENST00000548878 SOBPA7XYQ1 873 aa10.01□□□□□ -0.81
ARPC3-208ENST00000548878 CTDSPL2Q05D32 466 aa10.01□□□□□ -0.81
ARPC3-208ENST00000548878 SKIV2LQ15477 1246 aaKnown RBP10.01□□□□□ -0.81
ARPC3-208ENST00000548878 CCDC116Q8IYX3 515 aa10.01□□□□□ -0.81
ARPC3-208ENST00000548878 TSEN34Q9BSV6 310 aaKnown RBP10.01□□□□□ -0.81
ARPC3-208ENST00000548878 ERFEQ4G0M1 354 aa10□□□□□ -0.81
ARPC3-208ENST00000548878 CDV3Q9UKY7 258 aaKnown RBP10□□□□□ -0.81
ARPC3-208ENST00000548878 ZC3H4Q9UPT8 1303 aaKnown RBP10□□□□□ -0.81
ARPC3-208ENST00000548878 FKBPLQ9UIM3 349 aa9.99□□□□□ -0.81
ARPC3-208ENST00000548878 SOS2Q07890 1332 aaPredicted RBP9.99□□□□□ -0.81
ARPC3-208ENST00000548878 SH3D19Q5HYK7 790 aa9.98□□□□□ -0.81
ARPC3-208ENST00000548878 CARD14Q9BXL6 1004 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms