RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 HSPA1LP34931 641 aa29.17■■■□□ 2.26
CACNB3-210ENST00000548874 EDC4Q6P2E9 1401 aaKnown RBP29.14■■■□□ 2.26
CACNB3-210ENST00000548874 TNS3Q68CZ2 1445 aa29.13■■■□□ 2.25
CACNB3-210ENST00000548874 SPATA31A3Q5VYP0 1347 aa29.13■■■□□ 2.25
CACNB3-210ENST00000548874 CARD14Q9BXL6 1004 aa29.12■■■□□ 2.25
CACNB3-210ENST00000548874 PANK3Q9H999 370 aa29.12■■■□□ 2.25
CACNB3-210ENST00000548874 ALS2Q96Q42 1657 aa29.12■■■□□ 2.25
CACNB3-210ENST00000548874 LRRC59Q96AG4 307 aaKnown RBP29.11■■■□□ 2.25
CACNB3-210ENST00000548874 TTC21BQ7Z4L5 1316 aa29.11■■■□□ 2.25
CACNB3-210ENST00000548874 ILDR1Q86SU0 546 aaPredicted RBP29.09■■■□□ 2.25
CACNB3-210ENST00000548874 TTC21AQ8NDW8 1320 aa29.09■■■□□ 2.25
CACNB3-210ENST00000548874 NSD3Q9BZ95 1437 aa29.07■■■□□ 2.24
CACNB3-210ENST00000548874 PAK3O75914 559 aaPredicted RBP29.06■■■□□ 2.24
CACNB3-210ENST00000548874 ARHGEF10O15013 1369 aa29.05■■■□□ 2.24
CACNB3-210ENST00000548874 PNPLA6Q8IY17 1366 aa29.05■■■□□ 2.24
CACNB3-210ENST00000548874 PIK3C2AO00443 1686 aa29.05■■■□□ 2.24
CACNB3-210ENST00000548874 JCADQ9P266 1359 aa29.03■■■□□ 2.24
CACNB3-210ENST00000548874 SHPRHQ149N8 1683 aa29.03■■■□□ 2.24
CACNB3-210ENST00000548874 COL22A1Q8NFW1 1626 aaPredicted RBP29.03■■■□□ 2.24
CACNB3-210ENST00000548874 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.03■■■□□ 2.24
CACNB3-210ENST00000548874 PER1O15534 1290 aaPredicted RBP29.02■■■□□ 2.24
CACNB3-210ENST00000548874 ABTB2Q8N961 1025 aa29.01■■■□□ 2.23
CACNB3-210ENST00000548874 MED1Q15648 1581 aaPredicted RBP29.01■■■□□ 2.23
CACNB3-210ENST00000548874 USP31Q70CQ4 1352 aa29■■■□□ 2.23
CACNB3-210ENST00000548874 USP54Q70EL1 1684 aa28.99■■■□□ 2.23
CACNB3-210ENST00000548874 LMOD2Q6P5Q4 547 aa28.99■■■□□ 2.23
CACNB3-210ENST00000548874 NME9Q86XW9 330 aa28.99■■■□□ 2.23
CACNB3-210ENST00000548874 DDX10Q13206 875 aaKnown RBP28.98■■■□□ 2.23
CACNB3-210ENST00000548874 CGNL1Q0VF96 1302 aa28.97■■■□□ 2.23
CACNB3-210ENST00000548874 FYB1O15117 783 aa28.97■■■□□ 2.23
CACNB3-210ENST00000548874 MARF1Q9Y4F3 1742 aaKnown RBP28.97■■■□□ 2.23
CACNB3-210ENST00000548874 KIF20BQ96Q89 1820 aa28.97■■■□□ 2.23
CACNB3-210ENST00000548874 KNSTRNQ9Y448 316 aa28.96■■■□□ 2.23
CACNB3-210ENST00000548874 CRYBG1Q9Y4K1 1723 aa28.96■■■□□ 2.23
CACNB3-210ENST00000548874 USP19O94966 1318 aa28.95■■■□□ 2.23
CACNB3-210ENST00000548874 OVOS2A0A0J9YW53 1432 aa28.95■■■□□ 2.23
CACNB3-210ENST00000548874 OVOS2Q6IE36 1432 aa28.95■■■□□ 2.23
CACNB3-210ENST00000548874 NUTM2GQ5VZR2 741 aa28.95■■■□□ 2.22
CACNB3-210ENST00000548874 NLRP6P59044 892 aa28.94■■■□□ 2.22
CACNB3-210ENST00000548874 NLRP13Q86W25 1043 aa28.94■■■□□ 2.22
CACNB3-210ENST00000548874 ZRANB1Q9UGI0 708 aa28.94■■■□□ 2.22
CACNB3-210ENST00000548874 AMER1Q5JTC6 1135 aaPredicted RBP28.93■■■□□ 2.22
CACNB3-210ENST00000548874 ABCA3Q99758 1704 aa28.92■■■□□ 2.22
CACNB3-210ENST00000548874 SLIT3O75094 1523 aa28.92■■■□□ 2.22
CACNB3-210ENST00000548874 NSD2O96028 1365 aa28.91■■■□□ 2.22
CACNB3-210ENST00000548874 SPATA31A6Q5VVP1 1343 aa28.91■■■□□ 2.22
CACNB3-210ENST00000548874 NPC1L1Q9UHC9 1359 aa28.9■■■□□ 2.22
CACNB3-210ENST00000548874 GGNBP2Q9H3C7 697 aa28.9■■■□□ 2.22
CACNB3-210ENST00000548874 PHRF1Q9P1Y6 1649 aaKnown RBP28.9■■■□□ 2.22
CACNB3-210ENST00000548874 CABLES1Q8TDN4 633 aa28.88■■■□□ 2.21
CACNB3-210ENST00000548874 ANKRD26Q9UPS8 1709 aa28.88■■■□□ 2.21
CACNB3-210ENST00000548874 COG3Q96JB2 828 aa28.87■■■□□ 2.21
CACNB3-210ENST00000548874 LRP6O75581 1613 aa28.83■■■□□ 2.21
CACNB3-210ENST00000548874 GCP02774 474 aa28.83■■■□□ 2.21
CACNB3-210ENST00000548874 NFAT5O94916 1531 aa28.83■■■□□ 2.21
CACNB3-210ENST00000548874 PLEKHG5O94827 1062 aa28.82■■■□□ 2.2
CACNB3-210ENST00000548874 KCNH5Q8NCM2 988 aa28.81■■■□□ 2.2
CACNB3-210ENST00000548874 NUTM2BA6NNL0 878 aaPredicted RBP28.79■■■□□ 2.2
CACNB3-210ENST00000548874 NUTM2EB1AL46 878 aaPredicted RBP28.79■■■□□ 2.2
CACNB3-210ENST00000548874 NUTM2AQ8IVF1 878 aaPredicted RBP28.79■■■□□ 2.2
CACNB3-210ENST00000548874 HAP1P54257 671 aaPredicted RBP28.78■■■□□ 2.2
CACNB3-210ENST00000548874 CC2D1BQ5T0F9 858 aaKnown RBP28.78■■■□□ 2.2
CACNB3-210ENST00000548874 CPDO75976 1380 aa28.77■■■□□ 2.2
CACNB3-210ENST00000548874 MORC1Q86VD1 984 aa28.75■■■□□ 2.19
CACNB3-210ENST00000548874 SOX12O15370 315 aa28.74■■■□□ 2.19
CACNB3-210ENST00000548874 AATKQ6ZMQ8 1374 aa28.74■■■□□ 2.19
CACNB3-210ENST00000548874 KIAA0232Q92628 1395 aa28.74■■■□□ 2.19
CACNB3-210ENST00000548874 ADAMTS2O95450 1211 aa28.72■■■□□ 2.19
CACNB3-210ENST00000548874 ZC3H6P61129 1189 aaKnown RBP28.72■■■□□ 2.19
CACNB3-210ENST00000548874 ARHGEF25Q86VW2 580 aa28.72■■■□□ 2.19
CACNB3-210ENST00000548874 FBLN1P23142 703 aa28.71■■■□□ 2.19
CACNB3-210ENST00000548874 PARD3Q8TEW0 1356 aa28.7■■■□□ 2.18
CACNB3-210ENST00000548874 CNGB1Q14028 1251 aaPredicted RBP28.68■■■□□ 2.18
CACNB3-210ENST00000548874 PRDM11Q9NQV5 511 aa28.68■■■□□ 2.18
CACNB3-210ENST00000548874 MAP3K19Q56UN5 1328 aa28.68■■■□□ 2.18
CACNB3-210ENST00000548874 LTN1O94822 1766 aa28.67■■■□□ 2.18
CACNB3-210ENST00000548874 COL14A1Q05707 1796 aaKnown RBP28.67■■■□□ 2.18
CACNB3-210ENST00000548874 FAM83GA6ND36 823 aa28.67■■■□□ 2.18
CACNB3-210ENST00000548874 TNNT2P45379 298 aaPredicted RBP28.67■■■□□ 2.18
CACNB3-210ENST00000548874 ABCC6O95255 1503 aa28.67■■■□□ 2.18
CACNB3-210ENST00000548874 COL18A1P39060 1754 aa28.66■■■□□ 2.18
CACNB3-210ENST00000548874 LMO7Q8WWI1 1683 aa28.66■■■□□ 2.18
CACNB3-210ENST00000548874 RRS1Q15050 365 aaKnown RBP28.65■■■□□ 2.18
CACNB3-210ENST00000548874 SMG6Q86US8 1419 aaKnown RBP28.65■■■□□ 2.18
CACNB3-210ENST00000548874 CHRNA2Q15822 529 aa28.64■■■□□ 2.18
CACNB3-210ENST00000548874 MEX3CQ5U5Q3 659 aaKnown RBP28.64■■■□□ 2.18
CACNB3-210ENST00000548874 POLKQ9UBT6 870 aa28.64■■■□□ 2.18
CACNB3-210ENST00000548874 SLIT2O94813 1529 aa28.64■■■□□ 2.17
CACNB3-210ENST00000548874 KIF24Q5T7B8 1368 aa28.63■■■□□ 2.17
CACNB3-210ENST00000548874 C8orf37Q96NL8 207 aa28.63■■■□□ 2.17
CACNB3-210ENST00000548874 MAP2P11137 1827 aaKnown RBP28.63■■■□□ 2.17
CACNB3-210ENST00000548874 PLCH1Q4KWH8 1693 aa28.63■■■□□ 2.17
CACNB3-210ENST00000548874 PEAK1Q9H792 1746 aa28.63■■■□□ 2.17
CACNB3-210ENST00000548874 RTL1A6NKG5 1358 aa28.62■■■□□ 2.17
CACNB3-210ENST00000548874 RALBP1Q15311 655 aa28.62■■■□□ 2.17
CACNB3-210ENST00000548874 EMILIN1Q9Y6C2 1016 aa28.62■■■□□ 2.17
CACNB3-210ENST00000548874 ZBTB7CA1YPR0 619 aa28.6■■■□□ 2.17
CACNB3-210ENST00000548874 FNBP4Q8N3X1 1017 aaPredicted RBP28.6■■■□□ 2.17
CACNB3-210ENST00000548874 PRKRIP1Q9H875 184 aaPredicted RBP28.6■■■□□ 2.17
CACNB3-210ENST00000548874 CAMTA1Q9Y6Y1 1673 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms