RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 CFAP99D6REC4 459 aa11.79□□□□□ -0.52
CNOT2-215ENST00000548863 TUSC1Q2TAM9 212 aa11.79□□□□□ -0.52
CNOT2-215ENST00000548863 PLEKHG3A1L390 1219 aa11.77□□□□□ -0.53
CNOT2-215ENST00000548863 PDE4DQ08499 809 aa11.77□□□□□ -0.53
CNOT2-215ENST00000548863 F12P00748 615 aaPredicted RBP11.76□□□□□ -0.53
CNOT2-215ENST00000548863 LINC01559Q495D7 138 aa11.76□□□□□ -0.53
CNOT2-215ENST00000548863 CAPN5O15484 640 aaPredicted RBP11.75□□□□□ -0.53
CNOT2-215ENST00000548863 TERTO14746 1132 aaKnown RBP11.73□□□□□ -0.53
CNOT2-215ENST00000548863 WIPF1O43516 503 aa11.73□□□□□ -0.53
CNOT2-215ENST00000548863 CTHP32929 405 aa11.73□□□□□ -0.53
CNOT2-215ENST00000548863 MYSM1Q5VVJ2 828 aa11.73□□□□□ -0.53
CNOT2-215ENST00000548863 LILRB3O75022 631 aa11.71□□□□□ -0.53
CNOT2-215ENST00000548863 TRIM46Q7Z4K8 759 aa11.71□□□□□ -0.53
CNOT2-215ENST00000548863 CABLES1Q8TDN4 633 aa11.71□□□□□ -0.53
CNOT2-215ENST00000548863 CDK15Q96Q40 435 aa11.71□□□□□ -0.53
CNOT2-215ENST00000548863 LIMD1Q9UGP4 676 aa11.71□□□□□ -0.53
CNOT2-215ENST00000548863 TLL2Q9Y6L7 1015 aa11.71□□□□□ -0.53
CNOT2-215ENST00000548863 FAM174AQ8TBP5 190 aa11.7□□□□□ -0.54
CNOT2-215ENST00000548863 MAP10Q9P2G4 905 aa11.7□□□□□ -0.54
CNOT2-215ENST00000548863 SLC24A3Q9HC58 644 aa11.69□□□□□ -0.54
CNOT2-215ENST00000548863 PER1O15534 1290 aaPredicted RBP11.68□□□□□ -0.54
CNOT2-215ENST00000548863 BMP1P13497 986 aa11.68□□□□□ -0.54
CNOT2-215ENST00000548863 NNTQ13423 1086 aa11.68□□□□□ -0.54
CNOT2-215ENST00000548863 QPCTQ16769 361 aa11.68□□□□□ -0.54
CNOT2-215ENST00000548863 KLF16Q9BXK1 252 aaPredicted RBP11.68□□□□□ -0.54
CNOT2-215ENST00000548863 ADH1CP00326 375 aa11.67□□□□□ -0.54
CNOT2-215ENST00000548863 CSPP1Q1MSJ5 1256 aa11.66□□□□□ -0.54
CNOT2-215ENST00000548863 LCE2CQ5TA81 110 aa11.66□□□□□ -0.54
CNOT2-215ENST00000548863 NPAS3Q8IXF0 933 aa11.66□□□□□ -0.54
CNOT2-215ENST00000548863 FOXJ1Q92949 421 aa11.66□□□□□ -0.54
CNOT2-215ENST00000548863 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
CNOT2-215ENST00000548863 NUTM2BA6NNL0 878 aaPredicted RBP11.65□□□□□ -0.54
CNOT2-215ENST00000548863 NUTM2EB1AL46 878 aaPredicted RBP11.65□□□□□ -0.54
CNOT2-215ENST00000548863 NUTM2DQ5VT03 806 aaPredicted RBP11.65□□□□□ -0.54
CNOT2-215ENST00000548863 NUTM2AQ8IVF1 878 aaPredicted RBP11.65□□□□□ -0.54
CNOT2-215ENST00000548863 ARMC2Q8NEN0 867 aa11.65□□□□□ -0.54
CNOT2-215ENST00000548863 BPHLQ86WA6 291 aaPredicted RBP11.64□□□□□ -0.55
CNOT2-215ENST00000548863 NXF1Q9UBU9 619 aaKnown RBP11.64□□□□□ -0.55
CNOT2-215ENST00000548863 TIMP2P16035 220 aa11.63□□□□□ -0.55
CNOT2-215ENST00000548863 INSM1Q01101 510 aaPredicted RBP11.63□□□□□ -0.55
CNOT2-215ENST00000548863 CLK2P49760 499 aaKnown RBP11.62□□□□□ -0.55
CNOT2-215ENST00000548863 NR5A1Q13285 461 aa11.62□□□□□ -0.55
CNOT2-215ENST00000548863 C4orf48Q5BLP8 95 aa11.62□□□□□ -0.55
CNOT2-215ENST00000548863 ZFP42Q96MM3 310 aa11.62□□□□□ -0.55
CNOT2-215ENST00000548863 MRPL14Q6P1L8 145 aaKnown RBP11.61□□□□□ -0.55
CNOT2-215ENST00000548863 SH3RF1Q7Z6J0 888 aa11.61□□□□□ -0.55
CNOT2-215ENST00000548863 HELBQ8NG08 1087 aaPredicted RBP11.61□□□□□ -0.55
CNOT2-215ENST00000548863 GRM5P41594 1212 aa11.6□□□□□ -0.55
CNOT2-215ENST00000548863 WDR4P57081 412 aaKnown RBP11.6□□□□□ -0.55
CNOT2-215ENST00000548863 RTL5Q5HYW3 569 aaPredicted RBP11.6□□□□□ -0.55
CNOT2-215ENST00000548863 SLC16A10Q8TF71 515 aa11.6□□□□□ -0.55
CNOT2-215ENST00000548863 C1QTNF2Q9BXJ5 285 aa11.6□□□□□ -0.55
CNOT2-215ENST00000548863 TSC1Q92574 1164 aa11.59□□□□□ -0.55
CNOT2-215ENST00000548863 STK17AQ9UEE5 414 aa11.59□□□□□ -0.55
CNOT2-215ENST00000548863 SCARF1Q14162 830 aa11.58□□□□□ -0.56
CNOT2-215ENST00000548863 NBPF14Q5TI25 921 aa11.58□□□□□ -0.56
CNOT2-215ENST00000548863 AGERQ15109 404 aa11.57□□□□□ -0.56
CNOT2-215ENST00000548863 GPKOWQ92917 476 aaPredicted RBP eCLIP11.57□□□□□ -0.56
CNOT2-215ENST00000548863 MAP4K5Q9Y4K4 846 aa11.57□□□□□ -0.56
CNOT2-215ENST00000548863 ARID5BQ14865 1188 aa11.56□□□□□ -0.56
CNOT2-215ENST00000548863 SH3BP5LQ7L8J4 393 aa11.56□□□□□ -0.56
CNOT2-215ENST00000548863 TRMT44Q8IYL2 757 aaKnown RBP11.56□□□□□ -0.56
CNOT2-215ENST00000548863 NR3C2P08235 984 aa11.55□□□□□ -0.56
CNOT2-215ENST00000548863 H3BM21 787 aa11.54□□□□□ -0.56
CNOT2-215ENST00000548863 ZIC2O95409 532 aaPredicted RBP11.54□□□□□ -0.56
CNOT2-215ENST00000548863 IRF7Q92985 503 aa11.54□□□□□ -0.56
CNOT2-215ENST00000548863 POLR3EQ9NVU0 708 aa11.54□□□□□ -0.56
CNOT2-215ENST00000548863 ITPKCQ96DU7 683 aa11.53□□□□□ -0.56
CNOT2-215ENST00000548863 PURBQ96QR8 312 aaKnown RBP11.53□□□□□ -0.56
CNOT2-215ENST00000548863 SKIV2LQ15477 1246 aaKnown RBP11.52□□□□□ -0.57
CNOT2-215ENST00000548863 CTDSPL2Q05D32 466 aa11.51□□□□□ -0.57
CNOT2-215ENST00000548863 ZFAND3Q9H8U3 227 aa11.51□□□□□ -0.57
CNOT2-215ENST00000548863 SH3D19Q5HYK7 790 aa11.49□□□□□ -0.57
CNOT2-215ENST00000548863 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.49□□□□□ -0.57
CNOT2-215ENST00000548863 PPP2R2DQ66LE6 453 aa11.48□□□□□ -0.57
CNOT2-215ENST00000548863 PDXDC2PQ6P474 469 aa11.48□□□□□ -0.57
CNOT2-215ENST00000548863 GMPRP36959 345 aa11.47□□□□□ -0.57
CNOT2-215ENST00000548863 VASH1Q7L8A9 365 aaPredicted RBP11.47□□□□□ -0.57
CNOT2-215ENST00000548863 MEIOBQ8N635 442 aa11.47□□□□□ -0.57
CNOT2-215ENST00000548863 DDRGK1Q96HY6 314 aa11.47□□□□□ -0.57
CNOT2-215ENST00000548863 FSHRP23945 695 aa11.46□□□□□ -0.57
CNOT2-215ENST00000548863 ERFEQ4G0M1 354 aa11.46□□□□□ -0.57
CNOT2-215ENST00000548863 KDM4CQ9H3R0 1056 aa11.46□□□□□ -0.57
CNOT2-215ENST00000548863 EMILIN1Q9Y6C2 1016 aa11.46□□□□□ -0.57
CNOT2-215ENST00000548863 ZC3H4Q9UPT8 1303 aaKnown RBP11.45□□□□□ -0.58
CNOT2-215ENST00000548863 MAGEB6P1A0A0J9YX57 407 aa11.45□□□□□ -0.58
CNOT2-215ENST00000548863 FKBPLQ9UIM3 349 aa11.45□□□□□ -0.58
CNOT2-215ENST00000548863 ERBB4Q15303 1308 aa11.44□□□□□ -0.58
CNOT2-215ENST00000548863 UPP2O95045 317 aa11.44□□□□□ -0.58
CNOT2-215ENST00000548863 VSIG8P0DPA2 414 aa11.44□□□□□ -0.58
CNOT2-215ENST00000548863 VEGFBP49765 207 aa11.44□□□□□ -0.58
CNOT2-215ENST00000548863 CCDC116Q8IYX3 515 aa11.44□□□□□ -0.58
CNOT2-215ENST00000548863 LINC00528Q8N1L1 170 aa11.44□□□□□ -0.58
CNOT2-215ENST00000548863 LORP23490 312 aaPredicted RBP11.43□□□□□ -0.58
CNOT2-215ENST00000548863 FAM117AQ9C073 453 aa11.43□□□□□ -0.58
CNOT2-215ENST00000548863 CDV3Q9UKY7 258 aaKnown RBP11.43□□□□□ -0.58
CNOT2-215ENST00000548863 MAN1A2O60476 641 aa11.42□□□□□ -0.58
CNOT2-215ENST00000548863 FBXO31Q5XUX0 539 aaPredicted RBP11.42□□□□□ -0.58
CNOT2-215ENST00000548863 PROCA1Q8NCQ7 364 aaPredicted RBP11.42□□□□□ -0.58
CNOT2-215ENST00000548863 LRRN4Q8WUT4 740 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms