RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 MCM4P33991 863 aa17.59■□□□□ 0.41
CACNB3-209ENST00000548860 C16orf71Q8IYS4 520 aaPredicted RBP17.59■□□□□ 0.41
CACNB3-209ENST00000548860 DTNBO60941 627 aa17.59■□□□□ 0.41
CACNB3-209ENST00000548860 MCTP1Q6DN14 999 aa17.59■□□□□ 0.41
CACNB3-209ENST00000548860 ADCY10Q96PN6 1610 aa17.58■□□□□ 0.41
CACNB3-209ENST00000548860 BLMP54132 1417 aaPredicted RBP17.58■□□□□ 0.4
CACNB3-209ENST00000548860 NGEFQ8N5V2 710 aa17.58■□□□□ 0.4
CACNB3-209ENST00000548860 MAP4K4O95819 1239 aaPredicted RBP17.57■□□□□ 0.4
CACNB3-209ENST00000548860 FKBP5Q13451 457 aaPredicted RBP17.57■□□□□ 0.4
CACNB3-209ENST00000548860 AEBP1Q8IUX7 1158 aa17.57■□□□□ 0.4
CACNB3-209ENST00000548860 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.56■□□□□ 0.4
CACNB3-209ENST00000548860 SLC4A2P04920 1241 aa17.56■□□□□ 0.4
CACNB3-209ENST00000548860 TBC1D32Q96NH3 1257 aa17.56■□□□□ 0.4
CACNB3-209ENST00000548860 WDR7Q9Y4E6 1490 aa17.56■□□□□ 0.4
CACNB3-209ENST00000548860 GNAI1P63096 354 aa17.56■□□□□ 0.4
CACNB3-209ENST00000548860 STK31Q9BXU1 1019 aa17.56■□□□□ 0.4
CACNB3-209ENST00000548860 ZNF521Q96K83 1311 aa17.56■□□□□ 0.4
CACNB3-209ENST00000548860 CALD1Q05682 793 aaKnown RBP17.56■□□□□ 0.4
CACNB3-209ENST00000548860 DNTTIP2Q5QJE6 756 aaKnown RBP17.56■□□□□ 0.4
CACNB3-209ENST00000548860 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.56■□□□□ 0.4
CACNB3-209ENST00000548860 DUOX2Q9NRD8 1548 aa17.56■□□□□ 0.4
CACNB3-209ENST00000548860 ZMYM4Q5VZL5 1548 aa17.55■□□□□ 0.4
CACNB3-209ENST00000548860 RNF214Q8ND24 703 aa17.55■□□□□ 0.4
CACNB3-209ENST00000548860 TSPYL4Q9UJ04 414 aa17.55■□□□□ 0.4
CACNB3-209ENST00000548860 KDM5DQ9BY66 1539 aa17.55■□□□□ 0.4
CACNB3-209ENST00000548860 KCNJ4P48050 445 aa17.55■□□□□ 0.4
CACNB3-209ENST00000548860 CD109Q6YHK3 1445 aa17.54■□□□□ 0.4
CACNB3-209ENST00000548860 EXOC6BQ9Y2D4 811 aa17.54■□□□□ 0.4
CACNB3-209ENST00000548860 C8orf58Q8NAV2 365 aa17.54■□□□□ 0.4
CACNB3-209ENST00000548860 ANO2Q9NQ90 1003 aa17.54■□□□□ 0.4
CACNB3-209ENST00000548860 LARP6Q9BRS8 491 aaKnown RBP17.54■□□□□ 0.4
CACNB3-209ENST00000548860 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
CACNB3-209ENST00000548860 CHMP3Q9Y3E7 222 aa17.53■□□□□ 0.4
CACNB3-209ENST00000548860 NAP1L2Q9ULW6 460 aaPredicted RBP17.52■□□□□ 0.4
CACNB3-209ENST00000548860 TRIM35Q9UPQ4 493 aa17.52■□□□□ 0.4
CACNB3-209ENST00000548860 CEBPAP49715 358 aaPredicted RBP17.52■□□□□ 0.4
CACNB3-209ENST00000548860 MBIPQ9NS73 344 aa17.52■□□□□ 0.39
CACNB3-209ENST00000548860 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
CACNB3-209ENST00000548860 CAVIN1Q6NZI2 390 aaKnown RBP17.51■□□□□ 0.39
CACNB3-209ENST00000548860 NUDT16Q96DE0 195 aaKnown RBP17.51■□□□□ 0.39
CACNB3-209ENST00000548860 NFE2L2Q16236 605 aa17.5■□□□□ 0.39
CACNB3-209ENST00000548860 PREX2Q70Z35 1606 aa17.5■□□□□ 0.39
CACNB3-209ENST00000548860 SSFA2P28290 1259 aa17.5■□□□□ 0.39
CACNB3-209ENST00000548860 DDX54Q8TDD1 881 aaKnown RBP17.5■□□□□ 0.39
CACNB3-209ENST00000548860 IL1RAPL2Q9NP60 686 aa17.5■□□□□ 0.39
CACNB3-209ENST00000548860 API5Q9BZZ5 524 aaKnown RBP17.5■□□□□ 0.39
CACNB3-209ENST00000548860 ABCC2Q92887 1545 aa17.5■□□□□ 0.39
CACNB3-209ENST00000548860 OTUD7AQ8TE49 926 aaPredicted RBP17.5■□□□□ 0.39
CACNB3-209ENST00000548860 A0A1W2PP64 1363 aa17.49■□□□□ 0.39
CACNB3-209ENST00000548860 USHBP1Q8N6Y0 703 aa17.49■□□□□ 0.39
CACNB3-209ENST00000548860 POLKQ9UBT6 870 aa17.49■□□□□ 0.39
CACNB3-209ENST00000548860 ARHGEF5Q12774 1597 aa17.49■□□□□ 0.39
CACNB3-209ENST00000548860 BCL11BQ9C0K0 894 aaPredicted RBP17.49■□□□□ 0.39
CACNB3-209ENST00000548860 PIK3C2GO75747 1445 aa17.49■□□□□ 0.39
CACNB3-209ENST00000548860 DDX11L8A8MPP1 907 aa17.49■□□□□ 0.39
CACNB3-209ENST00000548860 NLRP6P59044 892 aa17.49■□□□□ 0.39
CACNB3-209ENST00000548860 FCHSD2O94868 740 aa17.48■□□□□ 0.39
CACNB3-209ENST00000548860 LMOD3Q0VAK6 560 aa17.48■□□□□ 0.39
CACNB3-209ENST00000548860 FOXO3O43524 673 aa17.48■□□□□ 0.39
CACNB3-209ENST00000548860 TBC1D9Q6ZT07 1266 aa17.48■□□□□ 0.39
CACNB3-209ENST00000548860 ZNF330Q9Y3S2 320 aaPredicted RBP17.48■□□□□ 0.39
CACNB3-209ENST00000548860 ATP10AO60312 1499 aa17.48■□□□□ 0.39
CACNB3-209ENST00000548860 PRPF40AO75400 957 aaKnown RBP17.48■□□□□ 0.39
CACNB3-209ENST00000548860 NEK4P51957 841 aa17.48■□□□□ 0.39
CACNB3-209ENST00000548860 HSP90AB2PQ58FF8 381 aa17.48■□□□□ 0.39
CACNB3-209ENST00000548860 TRMT2AQ8IZ69 625 aaKnown RBP17.48■□□□□ 0.39
CACNB3-209ENST00000548860 ASXL2Q76L83 1435 aa17.48■□□□□ 0.39
CACNB3-209ENST00000548860 MSNP26038 577 aaKnown RBP17.47■□□□□ 0.39
CACNB3-209ENST00000548860 CHAMP1Q96JM3 812 aa17.47■□□□□ 0.39
CACNB3-209ENST00000548860 POLR3AO14802 1390 aaPredicted RBP17.47■□□□□ 0.39
CACNB3-209ENST00000548860 XPCQ01831 940 aaPredicted RBP17.47■□□□□ 0.39
CACNB3-209ENST00000548860 TNPO1Q92973 898 aaKnown RBP17.47■□□□□ 0.39
CACNB3-209ENST00000548860 SLC52A1Q9NWF4 448 aa17.47■□□□□ 0.39
CACNB3-209ENST00000548860 CDC45O75419 566 aa17.47■□□□□ 0.39
CACNB3-209ENST00000548860 RTEL1-TNFRSF6BF6WH68 1400 aa17.46■□□□□ 0.39
CACNB3-209ENST00000548860 UPF3BQ9BZI7 483 aaKnown RBP17.46■□□□□ 0.39
CACNB3-209ENST00000548860 XRCC6P12956 609 aaKnown RBP eCLIP17.45■□□□□ 0.38
CACNB3-209ENST00000548860 ST18O60284 1047 aa17.45■□□□□ 0.38
CACNB3-209ENST00000548860 HMMRO75330 724 aa17.45■□□□□ 0.38
CACNB3-209ENST00000548860 PTPRTO14522 1441 aa17.44■□□□□ 0.38
CACNB3-209ENST00000548860 ANXA1P04083 346 aa17.44■□□□□ 0.38
CACNB3-209ENST00000548860 AIMP1Q12904 312 aaKnown RBP17.44■□□□□ 0.38
CACNB3-209ENST00000548860 MEIS3Q99687 375 aa17.44■□□□□ 0.38
CACNB3-209ENST00000548860 ZBTB40Q9NUA8 1239 aa17.43■□□□□ 0.38
CACNB3-209ENST00000548860 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
CACNB3-209ENST00000548860 USP19O94966 1318 aa17.43■□□□□ 0.38
CACNB3-209ENST00000548860 ERVK-7P63135 1459 aa17.43■□□□□ 0.38
CACNB3-209ENST00000548860 GRPEL1Q9HAV7 217 aa17.42■□□□□ 0.38
CACNB3-209ENST00000548860 POLR1AO95602 1720 aaPredicted RBP17.42■□□□□ 0.38
CACNB3-209ENST00000548860 HDGFP51858 240 aaKnown RBP17.42■□□□□ 0.38
CACNB3-209ENST00000548860 VAMP4O75379 141 aa17.42■□□□□ 0.38
CACNB3-209ENST00000548860 CCDC27Q2M243 656 aa17.42■□□□□ 0.38
CACNB3-209ENST00000548860 CCDC61Q9Y6R9 512 aa17.42■□□□□ 0.38
CACNB3-209ENST00000548860 MYO5CQ9NQX4 1742 aa17.41■□□□□ 0.38
CACNB3-209ENST00000548860 K7ELQ4 463 aaPredicted RBP17.41■□□□□ 0.38
CACNB3-209ENST00000548860 GDPD2Q9HCC8 539 aa17.41■□□□□ 0.38
CACNB3-209ENST00000548860 MAST1Q9Y2H9 1570 aa17.41■□□□□ 0.38
CACNB3-209ENST00000548860 ANKRD36BQ8N2N9 1353 aa17.4■□□□□ 0.38
CACNB3-209ENST00000548860 KIAA1211Q6ZU35 1233 aa17.4■□□□□ 0.38
CACNB3-209ENST00000548860 RPGRIP1LQ68CZ1 1315 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms