RNA–Protein interactions for RNA: ENST00000548855.5

PDE1B-205, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best)

Gene PDE1B, Length 4,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-205ENST00000548855 G3BP1Q13283 466 aaKnown RBP eCLIP16.11■□□□□ 0.17
PDE1B-205ENST00000548855 AMER1Q5JTC6 1135 aaPredicted RBP16.11■□□□□ 0.17
PDE1B-205ENST00000548855 FOXD4L5Q5VV16 416 aaPredicted RBP16.11■□□□□ 0.17
PDE1B-205ENST00000548855 FOXD4L4Q8WXT5 416 aaPredicted RBP16.11■□□□□ 0.17
PDE1B-205ENST00000548855 ADGRL2O95490 1459 aa16.11■□□□□ 0.17
PDE1B-205ENST00000548855 AIMP1Q12904 312 aaKnown RBP16.11■□□□□ 0.17
PDE1B-205ENST00000548855 ANO2Q9NQ90 1003 aa16.11■□□□□ 0.17
PDE1B-205ENST00000548855 HTATSF1O43719 755 aaKnown RBP16.11■□□□□ 0.17
PDE1B-205ENST00000548855 MSNP26038 577 aaKnown RBP16.11■□□□□ 0.17
PDE1B-205ENST00000548855 C20orf194Q5TEA3 1177 aa16.1■□□□□ 0.17
PDE1B-205ENST00000548855 GCC1Q96CN9 775 aa16.1■□□□□ 0.17
PDE1B-205ENST00000548855 GTF2E1P29083 439 aaPredicted RBP16.1■□□□□ 0.17
PDE1B-205ENST00000548855 DUSP27Q5VZP5 1158 aa16.1■□□□□ 0.17
PDE1B-205ENST00000548855 RIC3Q7Z5B4 369 aa16.1■□□□□ 0.17
PDE1B-205ENST00000548855 CDC45O75419 566 aa16.1■□□□□ 0.17
PDE1B-205ENST00000548855 GOLGA6L6A8MZA4 724 aa16.09■□□□□ 0.17
PDE1B-205ENST00000548855 CEBPAP49715 358 aaPredicted RBP16.09■□□□□ 0.17
PDE1B-205ENST00000548855 CHMP5Q9NZZ3 219 aa16.09■□□□□ 0.17
PDE1B-205ENST00000548855 RARSP54136 660 aaKnown RBP16.09■□□□□ 0.17
PDE1B-205ENST00000548855 THUMPD2Q9BTF0 503 aaKnown RBP16.09■□□□□ 0.17
PDE1B-205ENST00000548855 ARHGEF12Q9NZN5 1544 aa16.09■□□□□ 0.17
PDE1B-205ENST00000548855 HDGFL1Q5TGJ6 251 aa16.09■□□□□ 0.17
PDE1B-205ENST00000548855 ABCC10Q5T3U5 1492 aa16.08■□□□□ 0.17
PDE1B-205ENST00000548855 EMILIN1Q9Y6C2 1016 aa16.08■□□□□ 0.17
PDE1B-205ENST00000548855 NSD2O96028 1365 aa16.08■□□□□ 0.16
PDE1B-205ENST00000548855 CEP170Q5SW79 1584 aa16.08■□□□□ 0.16
PDE1B-205ENST00000548855 GSE1Q14687 1217 aa16.08■□□□□ 0.16
PDE1B-205ENST00000548855 NKTRP30414 1462 aaKnown RBP16.07■□□□□ 0.16
PDE1B-205ENST00000548855 NRDCO43847 1150 aa16.07■□□□□ 0.16
PDE1B-205ENST00000548855 AMOTL2Q9Y2J4 779 aa16.07■□□□□ 0.16
PDE1B-205ENST00000548855 PARD3Q8TEW0 1356 aa16.07■□□□□ 0.16
PDE1B-205ENST00000548855 SYTL4Q96C24 671 aaPredicted RBP16.07■□□□□ 0.16
PDE1B-205ENST00000548855 ABCC11Q96J66 1382 aa16.06■□□□□ 0.16
PDE1B-205ENST00000548855 ZKSCAN1P17029 563 aaPredicted RBP16.06■□□□□ 0.16
PDE1B-205ENST00000548855 ZNF530Q6P9A1 599 aaPredicted RBP16.06■□□□□ 0.16
PDE1B-205ENST00000548855 DDX49Q9Y6V7 483 aaKnown RBP16.06■□□□□ 0.16
PDE1B-205ENST00000548855 CSPP1Q1MSJ5 1256 aa16.06■□□□□ 0.16
PDE1B-205ENST00000548855 SURF6O75683 361 aaKnown RBP16.05■□□□□ 0.16
PDE1B-205ENST00000548855 GNAI2P04899 355 aa16.05■□□□□ 0.16
PDE1B-205ENST00000548855 SSH1Q8WYL5 1049 aa16.05■□□□□ 0.16
PDE1B-205ENST00000548855 ERC2O15083 957 aa16.05■□□□□ 0.16
PDE1B-205ENST00000548855 CDK11BP21127 795 aaKnown RBP16.05■□□□□ 0.16
PDE1B-205ENST00000548855 DRC7Q8IY82 874 aa16.04■□□□□ 0.16
PDE1B-205ENST00000548855 TMEM57Q8N5G2 664 aa16.04■□□□□ 0.16
PDE1B-205ENST00000548855 CCT4P50991 539 aaKnown RBP16.04■□□□□ 0.16
PDE1B-205ENST00000548855 KIF3AQ9Y496 699 aa16.04■□□□□ 0.16
PDE1B-205ENST00000548855 FRAT2O75474 233 aaPredicted RBP16.03■□□□□ 0.16
PDE1B-205ENST00000548855 TATP17735 454 aaPredicted RBP16.03■□□□□ 0.16
PDE1B-205ENST00000548855 SKOR2Q2VWA4 1001 aaPredicted RBP16.03■□□□□ 0.16
PDE1B-205ENST00000548855 UHRF1BP1Q6BDS2 1440 aa16.03■□□□□ 0.16
PDE1B-205ENST00000548855 DCTN1Q14203 1278 aa16.03■□□□□ 0.16
PDE1B-205ENST00000548855 CLASRPQ8N2M8 674 aaKnown RBP16.02■□□□□ 0.16
PDE1B-205ENST00000548855 ASXL1Q8IXJ9 1541 aa16.02■□□□□ 0.16
PDE1B-205ENST00000548855 LRRFIP1Q32MZ4 808 aaKnown RBP16.02■□□□□ 0.16
PDE1B-205ENST00000548855 FOXD4L6Q3SYB3 417 aaPredicted RBP16.02■□□□□ 0.16
PDE1B-205ENST00000548855 FOXD4L3Q6VB84 417 aaPredicted RBP16.02■□□□□ 0.16
PDE1B-205ENST00000548855 TOMM22Q9NS69 142 aa16.02■□□□□ 0.16
PDE1B-205ENST00000548855 XPCQ01831 940 aaPredicted RBP16.02■□□□□ 0.15
PDE1B-205ENST00000548855 NFKBIBQ15653 356 aa16.02■□□□□ 0.15
PDE1B-205ENST00000548855 MCM10Q7L590 875 aa16.02■□□□□ 0.15
PDE1B-205ENST00000548855 IFT57Q9NWB7 429 aa16.02■□□□□ 0.15
PDE1B-205ENST00000548855 ATP6V1DQ9Y5K8 247 aa16.01■□□□□ 0.15
PDE1B-205ENST00000548855 PER1O15534 1290 aaPredicted RBP16.01■□□□□ 0.15
PDE1B-205ENST00000548855 LRPPRCP42704 1394 aaKnown RBP16.01■□□□□ 0.15
PDE1B-205ENST00000548855 ANKRD36BQ8N2N9 1353 aa16.01■□□□□ 0.15
PDE1B-205ENST00000548855 CHD1LQ86WJ1 897 aa16■□□□□ 0.15
PDE1B-205ENST00000548855 ISY1Q9ULR0 285 aaKnown RBP16■□□□□ 0.15
PDE1B-205ENST00000548855 EIF2AK4Q9P2K8 1649 aaKnown RBP16■□□□□ 0.15
PDE1B-205ENST00000548855 ALDH1L2Q3SY69 923 aa16■□□□□ 0.15
PDE1B-205ENST00000548855 FYB1O15117 783 aa16■□□□□ 0.15
PDE1B-205ENST00000548855 RNF20Q5VTR2 975 aa15.99■□□□□ 0.15
PDE1B-205ENST00000548855 TNRQ92752 1358 aa15.99■□□□□ 0.15
PDE1B-205ENST00000548855 SRCIN1Q9C0H9 1055 aa15.99■□□□□ 0.15
PDE1B-205ENST00000548855 GNAT3A8MTJ3 354 aa15.99■□□□□ 0.15
PDE1B-205ENST00000548855 PHF14O94880 888 aa15.99■□□□□ 0.15
PDE1B-205ENST00000548855 KCNH5Q8NCM2 988 aa15.99■□□□□ 0.15
PDE1B-205ENST00000548855 MIS18AQ9NYP9 233 aa15.99■□□□□ 0.15
PDE1B-205ENST00000548855 FAM184AQ8NB25 1140 aa15.98■□□□□ 0.15
PDE1B-205ENST00000548855 SKAP1Q86WV1 359 aa15.98■□□□□ 0.15
PDE1B-205ENST00000548855 NUCB2P80303 420 aa15.98■□□□□ 0.15
PDE1B-205ENST00000548855 H3BQV1 296 aa15.97■□□□□ 0.15
PDE1B-205ENST00000548855 IFFO2Q5TF58 517 aa15.97■□□□□ 0.15
PDE1B-205ENST00000548855 PHF8Q9UPP1 1060 aa15.97■□□□□ 0.15
PDE1B-205ENST00000548855 KIAA2012Q0VF49 1180 aa15.97■□□□□ 0.15
PDE1B-205ENST00000548855 CHAF1AQ13111 956 aaPredicted RBP15.97■□□□□ 0.15
PDE1B-205ENST00000548855 NEUROD6Q96NK8 337 aa15.97■□□□□ 0.15
PDE1B-205ENST00000548855 FBLN1P23142 703 aa15.96■□□□□ 0.15
PDE1B-205ENST00000548855 ZC3H6P61129 1189 aaKnown RBP15.96■□□□□ 0.15
PDE1B-205ENST00000548855 RPAP2Q8IXW5 612 aaPredicted RBP15.96■□□□□ 0.15
PDE1B-205ENST00000548855 CNTROBQ8N137 903 aa15.96■□□□□ 0.15
PDE1B-205ENST00000548855 PUS7Q96PZ0 661 aaKnown RBP15.96■□□□□ 0.15
PDE1B-205ENST00000548855 UHRF1BP1LA0JNW5 1464 aa15.96■□□□□ 0.15
PDE1B-205ENST00000548855 CHMP4CQ96CF2 233 aa15.96■□□□□ 0.15
PDE1B-205ENST00000548855 CARD14Q9BXL6 1004 aa15.96■□□□□ 0.15
PDE1B-205ENST00000548855 TMX4Q9H1E5 349 aaPredicted RBP15.96■□□□□ 0.15
PDE1B-205ENST00000548855 STRN4Q9NRL3 753 aa15.96■□□□□ 0.14
PDE1B-205ENST00000548855 ACEP12821 1306 aa15.95■□□□□ 0.14
PDE1B-205ENST00000548855 SPG7Q9UQ90 795 aa15.95■□□□□ 0.14
PDE1B-205ENST00000548855 LRRCC1Q9C099 1032 aa15.95■□□□□ 0.14
PDE1B-205ENST00000548855 DMRT2Q9Y5R5 561 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms