RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 EFCAB6Q5THR3 1501 aa28.96■■■□□ 2.23
NPAS3-206ENST00000548645 NUCB1Q02818 461 aa28.96■■■□□ 2.23
NPAS3-206ENST00000548645 NOB1Q9ULX3 412 aaKnown RBP28.96■■■□□ 2.23
NPAS3-206ENST00000548645 C14orf93Q9H972 538 aaKnown RBP28.95■■■□□ 2.23
NPAS3-206ENST00000548645 MROH1Q8NDA8 1641 aa28.94■■■□□ 2.22
NPAS3-206ENST00000548645 RAB3GAP1Q15042 981 aa28.94■■■□□ 2.22
NPAS3-206ENST00000548645 TMEM57Q8N5G2 664 aa28.94■■■□□ 2.22
NPAS3-206ENST00000548645 IPO8O15397 1037 aaKnown RBP28.93■■■□□ 2.22
NPAS3-206ENST00000548645 PUS7Q96PZ0 661 aaKnown RBP28.93■■■□□ 2.22
NPAS3-206ENST00000548645 UHRF1BP1LA0JNW5 1464 aa28.93■■■□□ 2.22
NPAS3-206ENST00000548645 ABCC11Q96J66 1382 aa28.93■■■□□ 2.22
NPAS3-206ENST00000548645 IL16Q14005 1332 aa28.93■■■□□ 2.22
NPAS3-206ENST00000548645 TMPOP42166 694 aaKnown RBP28.92■■■□□ 2.22
NPAS3-206ENST00000548645 KIF16BQ96L93 1317 aa28.92■■■□□ 2.22
NPAS3-206ENST00000548645 ANKRD36BQ8N2N9 1353 aa28.92■■■□□ 2.22
NPAS3-206ENST00000548645 ERBB4Q15303 1308 aa28.91■■■□□ 2.22
NPAS3-206ENST00000548645 ADGRB3O60242 1522 aa28.91■■■□□ 2.22
NPAS3-206ENST00000548645 FANCAO15360 1455 aa28.91■■■□□ 2.22
NPAS3-206ENST00000548645 CHGAP10645 457 aaKnown RBP28.9■■■□□ 2.22
NPAS3-206ENST00000548645 CHD1LQ86WJ1 897 aa28.9■■■□□ 2.22
NPAS3-206ENST00000548645 GAS2L3Q86XJ1 694 aa28.9■■■□□ 2.22
NPAS3-206ENST00000548645 PLEKHF1Q96S99 279 aa28.9■■■□□ 2.22
NPAS3-206ENST00000548645 LNPKQ9C0E8 428 aa28.9■■■□□ 2.22
NPAS3-206ENST00000548645 TRIM35Q9UPQ4 493 aa28.9■■■□□ 2.22
NPAS3-206ENST00000548645 CD109Q6YHK3 1445 aa28.89■■■□□ 2.22
NPAS3-206ENST00000548645 BMP2KLQ5H9B9 411 aa28.89■■■□□ 2.21
NPAS3-206ENST00000548645 ADGRB1O14514 1584 aa28.89■■■□□ 2.21
NPAS3-206ENST00000548645 EVC2Q86UK5 1308 aa28.88■■■□□ 2.21
NPAS3-206ENST00000548645 U2SURPO15042 1029 aaKnown RBP28.87■■■□□ 2.21
NPAS3-206ENST00000548645 TMEM132EQ6IEE7 984 aa28.86■■■□□ 2.21
NPAS3-206ENST00000548645 PPRC1Q5VV67 1664 aaKnown RBP28.85■■■□□ 2.21
NPAS3-206ENST00000548645 KIF2CQ99661 725 aa28.83■■■□□ 2.21
NPAS3-206ENST00000548645 ALDH1L2Q3SY69 923 aa28.83■■■□□ 2.21
NPAS3-206ENST00000548645 LMTK2Q8IWU2 1503 aa28.82■■■□□ 2.2
NPAS3-206ENST00000548645 K7ELQ4 463 aaPredicted RBP28.82■■■□□ 2.2
NPAS3-206ENST00000548645 GOLGA6L22H0YM25 854 aa28.82■■■□□ 2.2
NPAS3-206ENST00000548645 PPLO60437 1756 aa28.81■■■□□ 2.2
NPAS3-206ENST00000548645 TPM2P07951 284 aa28.81■■■□□ 2.2
NPAS3-206ENST00000548645 CCDC173Q0VFZ6 552 aa28.81■■■□□ 2.2
NPAS3-206ENST00000548645 CFAP74Q9C0B2 1584 aa28.8■■■□□ 2.2
NPAS3-206ENST00000548645 RIPK4P57078 832 aa28.8■■■□□ 2.2
NPAS3-206ENST00000548645 RPGRIP1LQ68CZ1 1315 aa28.8■■■□□ 2.2
NPAS3-206ENST00000548645 GCC1Q96CN9 775 aa28.79■■■□□ 2.2
NPAS3-206ENST00000548645 ABCA9Q8IUA7 1624 aa28.79■■■□□ 2.2
NPAS3-206ENST00000548645 VSIG10Q8N0Z9 540 aa28.79■■■□□ 2.2
NPAS3-206ENST00000548645 CHMP4BQ9H444 224 aaKnown RBP28.79■■■□□ 2.2
NPAS3-206ENST00000548645 ANP32BQ92688 251 aaKnown RBP28.77■■■□□ 2.2
NPAS3-206ENST00000548645 PKNOX2Q96KN3 472 aa28.77■■■□□ 2.2
NPAS3-206ENST00000548645 TULP4Q9NRJ4 1543 aa28.77■■■□□ 2.2
NPAS3-206ENST00000548645 ANKRD45Q5TZF3 282 aa28.76■■■□□ 2.2
NPAS3-206ENST00000548645 PPP1R9BQ96SB3 815 aa28.76■■■□□ 2.2
NPAS3-206ENST00000548645 COL3A1P02461 1466 aaPredicted RBP28.76■■■□□ 2.19
NPAS3-206ENST00000548645 CLEC17AQ6ZS10 378 aa28.76■■■□□ 2.19
NPAS3-206ENST00000548645 FOXD4L1Q9NU39 408 aa28.76■■■□□ 2.19
NPAS3-206ENST00000548645 CD2BP2O95400 341 aaKnown RBP28.75■■■□□ 2.19
NPAS3-206ENST00000548645 IBTKQ9P2D0 1353 aaPredicted RBP28.75■■■□□ 2.19
NPAS3-206ENST00000548645 NASPP49321 788 aaPredicted RBP28.74■■■□□ 2.19
NPAS3-206ENST00000548645 ZNF428Q96B54 188 aa28.74■■■□□ 2.19
NPAS3-206ENST00000548645 TBC1D9Q6ZT07 1266 aa28.74■■■□□ 2.19
NPAS3-206ENST00000548645 CABP2Q9NPB3 220 aa28.73■■■□□ 2.19
NPAS3-206ENST00000548645 MED14O60244 1454 aa28.73■■■□□ 2.19
NPAS3-206ENST00000548645 BRPF1P55201 1214 aaPredicted RBP28.73■■■□□ 2.19
NPAS3-206ENST00000548645 KLHL40Q2TBA0 621 aa28.73■■■□□ 2.19
NPAS3-206ENST00000548645 SSFA2P28290 1259 aa28.72■■■□□ 2.19
NPAS3-206ENST00000548645 GLI2P10070 1586 aa28.72■■■□□ 2.19
NPAS3-206ENST00000548645 GGNBP2Q9H3C7 697 aa28.71■■■□□ 2.19
NPAS3-206ENST00000548645 PPIP5K1Q6PFW1 1433 aa28.71■■■□□ 2.19
NPAS3-206ENST00000548645 ZSCAN30Q86W11 494 aa28.7■■■□□ 2.19
NPAS3-206ENST00000548645 DDX49Q9Y6V7 483 aaKnown RBP28.7■■■□□ 2.19
NPAS3-206ENST00000548645 A0A1W2PP64 1363 aa28.7■■■□□ 2.19
NPAS3-206ENST00000548645 ZBTB7BO15156 539 aaPredicted RBP28.7■■■□□ 2.18
NPAS3-206ENST00000548645 CYB5RLQ6IPT4 315 aa28.7■■■□□ 2.18
NPAS3-206ENST00000548645 GAS2L2Q8NHY3 880 aa28.7■■■□□ 2.18
NPAS3-206ENST00000548645 ZMYND15Q9H091 742 aa28.69■■■□□ 2.18
NPAS3-206ENST00000548645 NPM1P06748 294 aaKnown RBP eCLIP28.69■■■□□ 2.18
NPAS3-206ENST00000548645 RBM42Q9BTD8 480 aaKnown RBP28.68■■■□□ 2.18
NPAS3-206ENST00000548645 DIAPH1O60610 1272 aaKnown RBP28.68■■■□□ 2.18
NPAS3-206ENST00000548645 BAG4O95429 457 aaKnown RBP28.68■■■□□ 2.18
NPAS3-206ENST00000548645 NPATQ14207 1427 aa28.68■■■□□ 2.18
NPAS3-206ENST00000548645 ARHGEF28Q8N1W1 1705 aaKnown RBP28.68■■■□□ 2.18
NPAS3-206ENST00000548645 CDC45O75419 566 aa28.66■■■□□ 2.18
NPAS3-206ENST00000548645 ARHGAP45Q92619 1136 aa28.66■■■□□ 2.18
NPAS3-206ENST00000548645 KIAA1211Q6ZU35 1233 aa28.66■■■□□ 2.18
NPAS3-206ENST00000548645 REREQ9P2R6 1566 aa28.65■■■□□ 2.18
NPAS3-206ENST00000548645 MSNP26038 577 aaKnown RBP28.64■■■□□ 2.18
NPAS3-206ENST00000548645 KIDINS220Q9ULH0 1771 aa28.64■■■□□ 2.17
NPAS3-206ENST00000548645 ARHGAP31Q2M1Z3 1444 aa28.63■■■□□ 2.17
NPAS3-206ENST00000548645 VGFO15240 615 aaPredicted RBP28.63■■■□□ 2.17
NPAS3-206ENST00000548645 CFAP44Q96MT7 982 aa28.63■■■□□ 2.17
NPAS3-206ENST00000548645 PIK3R4Q99570 1358 aa28.63■■■□□ 2.17
NPAS3-206ENST00000548645 PDCL3Q9H2J4 239 aa28.63■■■□□ 2.17
NPAS3-206ENST00000548645 FYB1O15117 783 aa28.62■■■□□ 2.17
NPAS3-206ENST00000548645 OFD1O75665 1012 aa28.62■■■□□ 2.17
NPAS3-206ENST00000548645 FCHSD2O94868 740 aa28.62■■■□□ 2.17
NPAS3-206ENST00000548645 SRPK2P78362 688 aaKnown RBP28.62■■■□□ 2.17
NPAS3-206ENST00000548645 C1orf115Q9H7X2 142 aa28.62■■■□□ 2.17
NPAS3-206ENST00000548645 TERF2IPQ9NYB0 399 aa28.62■■■□□ 2.17
NPAS3-206ENST00000548645 ZNF445P59923 1031 aa28.61■■■□□ 2.17
NPAS3-206ENST00000548645 NUCB2P80303 420 aa28.61■■■□□ 2.17
NPAS3-206ENST00000548645 RABEP1Q15276 862 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms