RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 ZNF316A6NFI3 1004 aaPredicted RBP16.36■□□□□ 0.21
TUBA1C-203ENST00000548470 POTEAQ6S8J7 498 aa16.36■□□□□ 0.21
TUBA1C-203ENST00000548470 AFF2P51816 1311 aa16.36■□□□□ 0.21
TUBA1C-203ENST00000548470 RGPD8O14715 1765 aaPredicted RBP16.36■□□□□ 0.21
TUBA1C-203ENST00000548470 CDCA8Q53HL2 280 aa16.35■□□□□ 0.21
TUBA1C-203ENST00000548470 TESK2Q96S53 571 aa16.35■□□□□ 0.21
TUBA1C-203ENST00000548470 RXRBP28702 533 aa16.33■□□□□ 0.2
TUBA1C-203ENST00000548470 TMF1P82094 1093 aa16.33■□□□□ 0.2
TUBA1C-203ENST00000548470 ABTB2Q8N961 1025 aa16.33■□□□□ 0.2
TUBA1C-203ENST00000548470 QTRT2Q9H974 415 aaKnown RBP16.33■□□□□ 0.2
TUBA1C-203ENST00000548470 USP21Q9UK80 565 aa16.33■□□□□ 0.2
TUBA1C-203ENST00000548470 C11orf95C9JLR9 678 aaPredicted RBP16.32■□□□□ 0.2
TUBA1C-203ENST00000548470 SOCS7O14512 581 aa16.32■□□□□ 0.2
TUBA1C-203ENST00000548470 NLRP13Q86W25 1043 aa16.32■□□□□ 0.2
TUBA1C-203ENST00000548470 NINLQ9Y2I6 1382 aa16.31■□□□□ 0.2
TUBA1C-203ENST00000548470 CABLES1Q8TDN4 633 aa16.31■□□□□ 0.2
TUBA1C-203ENST00000548470 TERF2IPQ9NYB0 399 aa16.31■□□□□ 0.2
TUBA1C-203ENST00000548470 TRPC5Q9UL62 973 aaPredicted RBP16.31■□□□□ 0.2
TUBA1C-203ENST00000548470 TOPAZ1Q8N9V7 1692 aa16.3■□□□□ 0.2
TUBA1C-203ENST00000548470 RBM6P78332 1123 aaKnown RBP16.3■□□□□ 0.2
TUBA1C-203ENST00000548470 HDGFL2Q7Z4V5 671 aaPredicted RBP16.3■□□□□ 0.2
TUBA1C-203ENST00000548470 USP6P35125 1406 aa16.29■□□□□ 0.2
TUBA1C-203ENST00000548470 TTC21AQ8NDW8 1320 aa16.29■□□□□ 0.2
TUBA1C-203ENST00000548470 TRPM3Q9HCF6 1732 aaPredicted RBP16.29■□□□□ 0.2
TUBA1C-203ENST00000548470 CPSF1Q10570 1443 aaKnown RBP16.28■□□□□ 0.2
TUBA1C-203ENST00000548470 UNC5CLQ8IV45 518 aa16.28■□□□□ 0.2
TUBA1C-203ENST00000548470 TMC1Q8TDI8 760 aa16.28■□□□□ 0.2
TUBA1C-203ENST00000548470 FAM83GA6ND36 823 aa16.27■□□□□ 0.2
TUBA1C-203ENST00000548470 SSH2Q76I76 1423 aa16.27■□□□□ 0.19
TUBA1C-203ENST00000548470 KTN1Q86UP2 1357 aaKnown RBP16.26■□□□□ 0.19
TUBA1C-203ENST00000548470 CCDC7Q96M83 1385 aa16.26■□□□□ 0.19
TUBA1C-203ENST00000548470 WASHC2AQ641Q2 1341 aa16.26■□□□□ 0.19
TUBA1C-203ENST00000548470 TTC21BQ7Z4L5 1316 aa16.26■□□□□ 0.19
TUBA1C-203ENST00000548470 NLRP6P59044 892 aa16.26■□□□□ 0.19
TUBA1C-203ENST00000548470 POLR3GLQ9BT43 218 aa16.26■□□□□ 0.19
TUBA1C-203ENST00000548470 SLC12A5Q9H2X9 1139 aa16.26■□□□□ 0.19
TUBA1C-203ENST00000548470 ALS2Q96Q42 1657 aa16.26■□□□□ 0.19
TUBA1C-203ENST00000548470 SLIT2O94813 1529 aa16.25■□□□□ 0.19
TUBA1C-203ENST00000548470 USP19O94966 1318 aa16.25■□□□□ 0.19
TUBA1C-203ENST00000548470 KIF7Q2M1P5 1343 aa16.25■□□□□ 0.19
TUBA1C-203ENST00000548470 BCL9LQ86UU0 1499 aa16.25■□□□□ 0.19
TUBA1C-203ENST00000548470 CDK12Q9NYV4 1490 aaPredicted RBP16.25■□□□□ 0.19
TUBA1C-203ENST00000548470 GCP02774 474 aa16.24■□□□□ 0.19
TUBA1C-203ENST00000548470 KCNH5Q8NCM2 988 aa16.24■□□□□ 0.19
TUBA1C-203ENST00000548470 MYOM1P52179 1685 aa16.24■□□□□ 0.19
TUBA1C-203ENST00000548470 ATRNO75882 1429 aa16.23■□□□□ 0.19
TUBA1C-203ENST00000548470 PLEKHG5O94827 1062 aa16.23■□□□□ 0.19
TUBA1C-203ENST00000548470 NUTM2GQ5VZR2 741 aa16.23■□□□□ 0.19
TUBA1C-203ENST00000548470 GJD4Q96KN9 370 aaPredicted RBP16.23■□□□□ 0.19
TUBA1C-203ENST00000548470 PRDM11Q9NQV5 511 aa16.23■□□□□ 0.19
TUBA1C-203ENST00000548470 VPS72Q15906 364 aa16.22■□□□□ 0.19
TUBA1C-203ENST00000548470 CPDO75976 1380 aa16.22■□□□□ 0.19
TUBA1C-203ENST00000548470 BTG4Q9NY30 223 aa16.21■□□□□ 0.19
TUBA1C-203ENST00000548470 EDC4Q6P2E9 1401 aaKnown RBP16.2■□□□□ 0.18
TUBA1C-203ENST00000548470 ZC3H6P61129 1189 aaKnown RBP16.2■□□□□ 0.18
TUBA1C-203ENST00000548470 USP31Q70CQ4 1352 aa16.19■□□□□ 0.18
TUBA1C-203ENST00000548470 KIAA0232Q92628 1395 aa16.19■□□□□ 0.18
TUBA1C-203ENST00000548470 MARF1Q9Y4F3 1742 aaKnown RBP16.19■□□□□ 0.18
TUBA1C-203ENST00000548470 CD163L1Q9NR16 1453 aa16.18■□□□□ 0.18
TUBA1C-203ENST00000548470 ANKRD36BQ8N2N9 1353 aa16.18■□□□□ 0.18
TUBA1C-203ENST00000548470 A0A1W2PP64 1363 aa16.17■□□□□ 0.18
TUBA1C-203ENST00000548470 ONECUT3O60422 494 aaPredicted RBP16.17■□□□□ 0.18
TUBA1C-203ENST00000548470 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
TUBA1C-203ENST00000548470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.17■□□□□ 0.18
TUBA1C-203ENST00000548470 EVA1CP58658 441 aa16.16■□□□□ 0.18
TUBA1C-203ENST00000548470 CCDC9Q9Y3X0 531 aaKnown RBP16.16■□□□□ 0.18
TUBA1C-203ENST00000548470 COL14A1Q05707 1796 aaKnown RBP16.15■□□□□ 0.18
TUBA1C-203ENST00000548470 AATKQ6ZMQ8 1374 aa16.14■□□□□ 0.17
TUBA1C-203ENST00000548470 ABCA3Q99758 1704 aa16.14■□□□□ 0.17
TUBA1C-203ENST00000548470 NWD2Q9ULI1 1742 aa16.14■□□□□ 0.17
TUBA1C-203ENST00000548470 CHRNA2Q15822 529 aa16.14■□□□□ 0.17
TUBA1C-203ENST00000548470 ARHGEF25Q86VW2 580 aa16.14■□□□□ 0.17
TUBA1C-203ENST00000548470 SLIT3O75094 1523 aa16.14■□□□□ 0.17
TUBA1C-203ENST00000548470 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.14■□□□□ 0.17
TUBA1C-203ENST00000548470 AKAP12Q02952 1782 aa16.13■□□□□ 0.17
TUBA1C-203ENST00000548470 NME9Q86XW9 330 aa16.13■□□□□ 0.17
TUBA1C-203ENST00000548470 CRYBG1Q9Y4K1 1723 aa16.12■□□□□ 0.17
TUBA1C-203ENST00000548470 COG3Q96JB2 828 aa16.12■□□□□ 0.17
TUBA1C-203ENST00000548470 SPATA31A5Q5VU36 1347 aa16.12■□□□□ 0.17
TUBA1C-203ENST00000548470 SPATA31A7Q8IWB4 1347 aa16.12■□□□□ 0.17
TUBA1C-203ENST00000548470 THRAP3Q9Y2W1 955 aaKnown RBP16.11■□□□□ 0.17
TUBA1C-203ENST00000548470 PHRF1Q9P1Y6 1649 aaKnown RBP16.11■□□□□ 0.17
TUBA1C-203ENST00000548470 RGS12O14924 1447 aa16.11■□□□□ 0.17
TUBA1C-203ENST00000548470 MON2Q7Z3U7 1717 aa16.1■□□□□ 0.17
TUBA1C-203ENST00000548470 NRKQ7Z2Y5 1582 aa16.09■□□□□ 0.17
TUBA1C-203ENST00000548470 PIK3C2AO00443 1686 aa16.09■□□□□ 0.17
TUBA1C-203ENST00000548470 FYB1O15117 783 aa16.09■□□□□ 0.17
TUBA1C-203ENST00000548470 STRN4Q9NRL3 753 aa16.09■□□□□ 0.17
TUBA1C-203ENST00000548470 SPATA31A1Q5TZJ5 1347 aa16.09■□□□□ 0.17
TUBA1C-203ENST00000548470 BARGINQ6ZT62 677 aa16.08■□□□□ 0.16
TUBA1C-203ENST00000548470 SEPT12Q8IYM1 358 aa16.08■□□□□ 0.16
TUBA1C-203ENST00000548470 ZRANB1Q9UGI0 708 aa16.08■□□□□ 0.16
TUBA1C-203ENST00000548470 PLCH1Q4KWH8 1693 aa16.08■□□□□ 0.16
TUBA1C-203ENST00000548470 DIEXFQ68CQ4 756 aaKnown RBP16.07■□□□□ 0.16
TUBA1C-203ENST00000548470 CCDC125Q86Z20 511 aa16.07■□□□□ 0.16
TUBA1C-203ENST00000548470 CAMTA1Q9Y6Y1 1673 aa16.06■□□□□ 0.16
TUBA1C-203ENST00000548470 OVOS2A0A0J9YW53 1432 aa16.06■□□□□ 0.16
TUBA1C-203ENST00000548470 OVOS2Q6IE36 1432 aa16.06■□□□□ 0.16
TUBA1C-203ENST00000548470 ZBTB7CA1YPR0 619 aa16.06■□□□□ 0.16
TUBA1C-203ENST00000548470 FAM98CQ17RN3 349 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms