RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 CRYBG1Q9Y4K1 1723 aa23.98■■□□□ 1.43
LETMD1-216ENST00000548401 EDC4Q6P2E9 1401 aaKnown RBP23.97■■□□□ 1.43
LETMD1-216ENST00000548401 KTN1Q86UP2 1357 aaKnown RBP23.97■■□□□ 1.43
LETMD1-216ENST00000548401 ABCA3Q99758 1704 aa23.97■■□□□ 1.43
LETMD1-216ENST00000548401 POLR3GLQ9BT43 218 aa23.97■■□□□ 1.43
LETMD1-216ENST00000548401 MARF1Q9Y4F3 1742 aaKnown RBP23.96■■□□□ 1.43
LETMD1-216ENST00000548401 USP54Q70EL1 1684 aa23.96■■□□□ 1.43
LETMD1-216ENST00000548401 PNPLA6Q8IY17 1366 aa23.95■■□□□ 1.42
LETMD1-216ENST00000548401 SPATA31A3Q5VYP0 1347 aa23.95■■□□□ 1.42
LETMD1-216ENST00000548401 PSME1Q06323 249 aa23.95■■□□□ 1.42
LETMD1-216ENST00000548401 TERF2IPQ9NYB0 399 aa23.95■■□□□ 1.42
LETMD1-216ENST00000548401 HDGFL2Q7Z4V5 671 aaPredicted RBP23.93■■□□□ 1.42
LETMD1-216ENST00000548401 ILDR1Q86SU0 546 aaPredicted RBP23.93■■□□□ 1.42
LETMD1-216ENST00000548401 ZNF692Q9BU19 519 aaPredicted RBP23.93■■□□□ 1.42
LETMD1-216ENST00000548401 KIF20BQ96Q89 1820 aa23.92■■□□□ 1.42
LETMD1-216ENST00000548401 JCADQ9P266 1359 aa23.91■■□□□ 1.42
LETMD1-216ENST00000548401 NSD3Q9BZ95 1437 aa23.91■■□□□ 1.42
LETMD1-216ENST00000548401 PHRF1Q9P1Y6 1649 aaKnown RBP23.91■■□□□ 1.42
LETMD1-216ENST00000548401 ARHGEF10O15013 1369 aa23.91■■□□□ 1.42
LETMD1-216ENST00000548401 TTC21BQ7Z4L5 1316 aa23.9■■□□□ 1.42
LETMD1-216ENST00000548401 LRRC59Q96AG4 307 aaKnown RBP23.9■■□□□ 1.42
LETMD1-216ENST00000548401 TTC21AQ8NDW8 1320 aa23.88■■□□□ 1.41
LETMD1-216ENST00000548401 CARD14Q9BXL6 1004 aa23.88■■□□□ 1.41
LETMD1-216ENST00000548401 OVOS2A0A0J9YW53 1432 aa23.85■■□□□ 1.41
LETMD1-216ENST00000548401 OVOS2Q6IE36 1432 aa23.85■■□□□ 1.41
LETMD1-216ENST00000548401 SLIT3O75094 1523 aa23.85■■□□□ 1.41
LETMD1-216ENST00000548401 ANKRD26Q9UPS8 1709 aa23.85■■□□□ 1.41
LETMD1-216ENST00000548401 PANK3Q9H999 370 aa23.85■■□□□ 1.41
LETMD1-216ENST00000548401 PAK3O75914 559 aaPredicted RBP23.84■■□□□ 1.41
LETMD1-216ENST00000548401 LRP6O75581 1613 aa23.84■■□□□ 1.41
LETMD1-216ENST00000548401 USP19O94966 1318 aa23.84■■□□□ 1.41
LETMD1-216ENST00000548401 USP31Q70CQ4 1352 aa23.83■■□□□ 1.41
LETMD1-216ENST00000548401 ZNF316A6NFI3 1004 aaPredicted RBP23.81■■□□□ 1.4
LETMD1-216ENST00000548401 NME9Q86XW9 330 aa23.81■■□□□ 1.4
LETMD1-216ENST00000548401 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.81■■□□□ 1.4
LETMD1-216ENST00000548401 SPATA31A6Q5VVP1 1343 aa23.8■■□□□ 1.4
LETMD1-216ENST00000548401 NFAT5O94916 1531 aa23.79■■□□□ 1.4
LETMD1-216ENST00000548401 ABTB2Q8N961 1025 aa23.79■■□□□ 1.4
LETMD1-216ENST00000548401 LMOD2Q6P5Q4 547 aa23.78■■□□□ 1.4
LETMD1-216ENST00000548401 PER1O15534 1290 aaPredicted RBP23.77■■□□□ 1.4
LETMD1-216ENST00000548401 NUTM2GQ5VZR2 741 aa23.77■■□□□ 1.4
LETMD1-216ENST00000548401 ZRANB1Q9UGI0 708 aa23.77■■□□□ 1.4
LETMD1-216ENST00000548401 FYB1O15117 783 aa23.75■■□□□ 1.39
LETMD1-216ENST00000548401 CGNL1Q0VF96 1302 aa23.75■■□□□ 1.39
LETMD1-216ENST00000548401 CABLES1Q8TDN4 633 aa23.74■■□□□ 1.39
LETMD1-216ENST00000548401 NSD2O96028 1365 aa23.74■■□□□ 1.39
LETMD1-216ENST00000548401 NLRP6P59044 892 aa23.73■■□□□ 1.39
LETMD1-216ENST00000548401 AMER1Q5JTC6 1135 aaPredicted RBP23.73■■□□□ 1.39
LETMD1-216ENST00000548401 NLRP13Q86W25 1043 aa23.73■■□□□ 1.39
LETMD1-216ENST00000548401 NPC1L1Q9UHC9 1359 aa23.72■■□□□ 1.39
LETMD1-216ENST00000548401 GGNBP2Q9H3C7 697 aa23.71■■□□□ 1.39
LETMD1-216ENST00000548401 KNSTRNQ9Y448 316 aa23.7■■□□□ 1.38
LETMD1-216ENST00000548401 DDX10Q13206 875 aaKnown RBP23.69■■□□□ 1.38
LETMD1-216ENST00000548401 LTN1O94822 1766 aa23.69■■□□□ 1.38
LETMD1-216ENST00000548401 PLCH1Q4KWH8 1693 aa23.69■■□□□ 1.38
LETMD1-216ENST00000548401 LMO7Q8WWI1 1683 aa23.68■■□□□ 1.38
LETMD1-216ENST00000548401 COL14A1Q05707 1796 aaKnown RBP23.68■■□□□ 1.38
LETMD1-216ENST00000548401 CPDO75976 1380 aa23.67■■□□□ 1.38
LETMD1-216ENST00000548401 NUTM2BA6NNL0 878 aaPredicted RBP23.67■■□□□ 1.38
LETMD1-216ENST00000548401 NUTM2EB1AL46 878 aaPredicted RBP23.67■■□□□ 1.38
LETMD1-216ENST00000548401 PLEKHG5O94827 1062 aa23.67■■□□□ 1.38
LETMD1-216ENST00000548401 NUTM2AQ8IVF1 878 aaPredicted RBP23.67■■□□□ 1.38
LETMD1-216ENST00000548401 COG3Q96JB2 828 aa23.67■■□□□ 1.38
LETMD1-216ENST00000548401 COL18A1P39060 1754 aa23.66■■□□□ 1.38
LETMD1-216ENST00000548401 ABCC6O95255 1503 aa23.66■■□□□ 1.38
LETMD1-216ENST00000548401 GCP02774 474 aa23.66■■□□□ 1.38
LETMD1-216ENST00000548401 KIAA0232Q92628 1395 aa23.65■■□□□ 1.38
LETMD1-216ENST00000548401 NRAPQ86VF7 1730 aa23.64■■□□□ 1.38
LETMD1-216ENST00000548401 NWD2Q9ULI1 1742 aa23.64■■□□□ 1.37
LETMD1-216ENST00000548401 KCNH5Q8NCM2 988 aa23.63■■□□□ 1.37
LETMD1-216ENST00000548401 PEAK1Q9H792 1746 aa23.63■■□□□ 1.37
LETMD1-216ENST00000548401 ADAMTS2O95450 1211 aa23.62■■□□□ 1.37
LETMD1-216ENST00000548401 HAP1P54257 671 aaPredicted RBP23.62■■□□□ 1.37
LETMD1-216ENST00000548401 SLIT2O94813 1529 aa23.61■■□□□ 1.37
LETMD1-216ENST00000548401 AATKQ6ZMQ8 1374 aa23.61■■□□□ 1.37
LETMD1-216ENST00000548401 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.61■■□□□ 1.37
LETMD1-216ENST00000548401 SMG6Q86US8 1419 aaKnown RBP23.6■■□□□ 1.37
LETMD1-216ENST00000548401 SOX12O15370 315 aa23.59■■□□□ 1.37
LETMD1-216ENST00000548401 ZC3H6P61129 1189 aaKnown RBP23.58■■□□□ 1.37
LETMD1-216ENST00000548401 CC2D1BQ5T0F9 858 aaKnown RBP23.58■■□□□ 1.37
LETMD1-216ENST00000548401 ARHGEF25Q86VW2 580 aa23.58■■□□□ 1.37
LETMD1-216ENST00000548401 MAP2P11137 1827 aaKnown RBP23.57■■□□□ 1.36
LETMD1-216ENST00000548401 RGPD5Q99666 1765 aa23.57■■□□□ 1.36
LETMD1-216ENST00000548401 CAMTA1Q9Y6Y1 1673 aa23.57■■□□□ 1.36
LETMD1-216ENST00000548401 PRDM11Q9NQV5 511 aa23.56■■□□□ 1.36
LETMD1-216ENST00000548401 MAP3K19Q56UN5 1328 aa23.56■■□□□ 1.36
LETMD1-216ENST00000548401 RTL1A6NKG5 1358 aa23.55■■□□□ 1.36
LETMD1-216ENST00000548401 PARD3Q8TEW0 1356 aa23.55■■□□□ 1.36
LETMD1-216ENST00000548401 FAM83GA6ND36 823 aa23.55■■□□□ 1.36
LETMD1-216ENST00000548401 FBLN1P23142 703 aa23.55■■□□□ 1.36
LETMD1-216ENST00000548401 CHRNA2Q15822 529 aa23.54■■□□□ 1.36
LETMD1-216ENST00000548401 MEX3CQ5U5Q3 659 aaKnown RBP23.54■■□□□ 1.36
LETMD1-216ENST00000548401 MORC1Q86VD1 984 aa23.54■■□□□ 1.36
LETMD1-216ENST00000548401 C8orf37Q96NL8 207 aa23.54■■□□□ 1.36
LETMD1-216ENST00000548401 BCL9LQ86UU0 1499 aa23.54■■□□□ 1.36
LETMD1-216ENST00000548401 COL5A2P05997 1499 aaPredicted RBP23.53■■□□□ 1.36
LETMD1-216ENST00000548401 KIF24Q5T7B8 1368 aa23.52■■□□□ 1.36
LETMD1-216ENST00000548401 CDK12Q9NYV4 1490 aaPredicted RBP23.52■■□□□ 1.36
LETMD1-216ENST00000548401 RRS1Q15050 365 aaKnown RBP23.52■■□□□ 1.36
LETMD1-216ENST00000548401 FNBP4Q8N3X1 1017 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms