RNA–Protein interactions for RNA: ENST00000548324.5

ACSS3-204, Transcript of acyl-CoA synthetase short chain family member 3, human

TSL 2

Gene ACSS3, Length 2,214 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSS3-204	ENST00000548324	CLEC4G	Q6UXB4	293 aa		11.21	□□□□□ -0.62
ACSS3-204	ENST00000548324	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.21	□□□□□ -0.62
ACSS3-204	ENST00000548324	SMG6	Q86US8	1419 aa	Known RBP	11.21	□□□□□ -0.62
ACSS3-204	ENST00000548324	CSB-PGBD3	P0DP91	1061 aa		11.2	□□□□□ -0.62
ACSS3-204	ENST00000548324	PTPRK	Q15262	1439 aa		11.2	□□□□□ -0.62
ACSS3-204	ENST00000548324	PBXIP1	Q96AQ6	731 aa		11.2	□□□□□ -0.62
ACSS3-204	ENST00000548324	ITSN2	Q9NZM3	1697 aa		11.2	□□□□□ -0.62
ACSS3-204	ENST00000548324	MAP3K4	Q9Y6R4	1608 aa		11.2	□□□□□ -0.62
ACSS3-204	ENST00000548324	ZNF644	Q9H582	1327 aa	Predicted RBP	11.2	□□□□□ -0.62
ACSS3-204	ENST00000548324	MAMSTR	Q6ZN01	415 aa		11.2	□□□□□ -0.62
ACSS3-204	ENST00000548324	CALR3	Q96L12	384 aa	Known RBP	11.2	□□□□□ -0.62
ACSS3-204	ENST00000548324	SAMD9L	Q8IVG5	1584 aa		11.19	□□□□□ -0.62
ACSS3-204	ENST00000548324	ARID4A	P29374	1257 aa	Predicted RBP	11.19	□□□□□ -0.62
ACSS3-204	ENST00000548324	FAN1	Q9Y2M0	1017 aa		11.19	□□□□□ -0.62
ACSS3-204	ENST00000548324	TCOF1	Q13428	1488 aa	Known RBP	11.19	□□□□□ -0.62
ACSS3-204	ENST00000548324	GIPC2	Q8TF65	315 aa		11.19	□□□□□ -0.62
ACSS3-204	ENST00000548324	BCL2L13	Q9BXK5	485 aa		11.19	□□□□□ -0.62
ACSS3-204	ENST00000548324	RFX1	P22670	979 aa		11.18	□□□□□ -0.62
ACSS3-204	ENST00000548324	MAF1	Q9H063	256 aa		11.18	□□□□□ -0.62
ACSS3-204	ENST00000548324	TSPOAP1	O95153	1857 aa		11.18	□□□□□ -0.62
ACSS3-204	ENST00000548324	GLI2	P10070	1586 aa		11.18	□□□□□ -0.62
ACSS3-204	ENST00000548324	DENND4B	O75064	1496 aa	Predicted RBP	11.17	□□□□□ -0.62
ACSS3-204	ENST00000548324	hCG_2014768	A0A024R1R8	64 aa		11.17	□□□□□ -0.62
ACSS3-204	ENST00000548324	CCDC7	Q96M83	1385 aa		11.16	□□□□□ -0.62
ACSS3-204	ENST00000548324	VGF	O15240	615 aa	Predicted RBP	11.16	□□□□□ -0.62
ACSS3-204	ENST00000548324	CAMSAP2	Q08AD1	1489 aa		11.16	□□□□□ -0.62
ACSS3-204	ENST00000548324	ARHGEF12	Q9NZN5	1544 aa		11.16	□□□□□ -0.62
ACSS3-204	ENST00000548324	SOCS7	O14512	581 aa		11.16	□□□□□ -0.62
ACSS3-204	ENST00000548324	HSPA5	P11021	654 aa	Known RBP	11.16	□□□□□ -0.62
ACSS3-204	ENST00000548324	MLLT3	P42568	568 aa	Predicted RBP	11.16	□□□□□ -0.62
ACSS3-204	ENST00000548324	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.16	□□□□□ -0.62
ACSS3-204	ENST00000548324	CHPF2	Q9P2E5	772 aa		11.16	□□□□□ -0.62
ACSS3-204	ENST00000548324	PLCH2	O75038	1416 aa		11.16	□□□□□ -0.62
ACSS3-204	ENST00000548324	ARHGAP5	Q13017	1502 aa		11.15	□□□□□ -0.62
ACSS3-204	ENST00000548324	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.15	□□□□□ -0.62
ACSS3-204	ENST00000548324	IPO9	Q96P70	1041 aa	Known RBP	11.15	□□□□□ -0.62
ACSS3-204	ENST00000548324	TMA7	Q9Y2S6	64 aa	Known RBP	11.15	□□□□□ -0.62
ACSS3-204	ENST00000548324	CLGN	O14967	610 aa		11.15	□□□□□ -0.63
ACSS3-204	ENST00000548324	IGBP1	P78318	339 aa		11.15	□□□□□ -0.63
ACSS3-204	ENST00000548324	GLMN	Q92990	594 aa		11.15	□□□□□ -0.63
ACSS3-204	ENST00000548324	MIA2	Q96PC5	1412 aa		11.14	□□□□□ -0.63
ACSS3-204	ENST00000548324	PTPRO	Q16827	1216 aa		11.14	□□□□□ -0.63
ACSS3-204	ENST00000548324	B4GALNT3	Q6L9W6	998 aa		11.14	□□□□□ -0.63
ACSS3-204	ENST00000548324	TBC1D2	Q9BYX2	928 aa		11.14	□□□□□ -0.63
ACSS3-204	ENST00000548324	DMRT2	Q9Y5R5	561 aa		11.14	□□□□□ -0.63
ACSS3-204	ENST00000548324	ARAP3	Q8WWN8	1544 aa		11.13	□□□□□ -0.63
ACSS3-204	ENST00000548324	SYCP2	Q9BX26	1530 aa		11.13	□□□□□ -0.63
ACSS3-204	ENST00000548324	PAK3	O75914	559 aa	Predicted RBP	11.13	□□□□□ -0.63
ACSS3-204	ENST00000548324	ANP32A	P39687	249 aa	Known RBP	11.13	□□□□□ -0.63
ACSS3-204	ENST00000548324	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
ACSS3-204	ENST00000548324	SDR16C5	Q8N3Y7	309 aa		11.13	□□□□□ -0.63
ACSS3-204	ENST00000548324	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
ACSS3-204	ENST00000548324	SPACA7	Q96KW9	195 aa		11.13	□□□□□ -0.63
ACSS3-204	ENST00000548324	LNPK	Q9C0E8	428 aa		11.13	□□□□□ -0.63
ACSS3-204	ENST00000548324	ABCC1	P33527	1531 aa		11.13	□□□□□ -0.63
ACSS3-204	ENST00000548324	POM121C	A8CG34	1229 aa		11.13	□□□□□ -0.63
ACSS3-204	ENST00000548324	SSFA2	P28290	1259 aa		11.13	□□□□□ -0.63
ACSS3-204	ENST00000548324	CD109	Q6YHK3	1445 aa		11.13	□□□□□ -0.63
ACSS3-204	ENST00000548324	STAG3	Q9UJ98	1225 aa		11.12	□□□□□ -0.63
ACSS3-204	ENST00000548324	SPATA31E1	Q6ZUB1	1445 aa		11.12	□□□□□ -0.63
ACSS3-204	ENST00000548324	MBD5	Q9P267	1494 aa		11.12	□□□□□ -0.63
ACSS3-204	ENST00000548324	EIF3J	O75822	258 aa	Known RBP	11.12	□□□□□ -0.63
ACSS3-204	ENST00000548324	WDR78	Q5VTH9	848 aa		11.12	□□□□□ -0.63
ACSS3-204	ENST00000548324	EGFLAM	Q63HQ2	1017 aa		11.12	□□□□□ -0.63
ACSS3-204	ENST00000548324	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.12	□□□□□ -0.63
ACSS3-204	ENST00000548324	FANCA	O15360	1455 aa		11.12	□□□□□ -0.63
ACSS3-204	ENST00000548324	TEX14	Q8IWB6	1497 aa		11.12	□□□□□ -0.63
ACSS3-204	ENST00000548324	DNMT1	P26358	1616 aa	Known RBP	11.11	□□□□□ -0.63
ACSS3-204	ENST00000548324	CROCC2	H7BZ55	1655 aa		11.11	□□□□□ -0.63
ACSS3-204	ENST00000548324	RTL5	Q5HYW3	569 aa	Predicted RBP	11.11	□□□□□ -0.63
ACSS3-204	ENST00000548324	VRTN	Q9H8Y1	702 aa		11.11	□□□□□ -0.63
ACSS3-204	ENST00000548324	EXOC5	O00471	708 aa		11.11	□□□□□ -0.63
ACSS3-204	ENST00000548324	SOX12	O15370	315 aa		11.1	□□□□□ -0.63
ACSS3-204	ENST00000548324	EPB41L2	O43491	1005 aa	Known RBP	11.1	□□□□□ -0.63
ACSS3-204	ENST00000548324	C4orf46	Q504U0	113 aa		11.1	□□□□□ -0.63
ACSS3-204	ENST00000548324	ILDR2	Q71H61	639 aa		11.1	□□□□□ -0.63
ACSS3-204	ENST00000548324	C11orf96	Q7Z7L8	435 aa		11.1	□□□□□ -0.63
ACSS3-204	ENST00000548324	KCNB2	Q92953	911 aa		11.1	□□□□□ -0.63
ACSS3-204	ENST00000548324	GNL3L	Q9NVN8	582 aa	Known RBP	11.1	□□□□□ -0.63
ACSS3-204	ENST00000548324	ABCC5	O15440	1437 aa		11.1	□□□□□ -0.63
ACSS3-204	ENST00000548324	C11orf95	C9JLR9	678 aa	Predicted RBP	11.09	□□□□□ -0.63
ACSS3-204	ENST00000548324	RHBDL3	P58872	404 aa		11.09	□□□□□ -0.63
ACSS3-204	ENST00000548324	CCDC184	Q52MB2	194 aa		11.09	□□□□□ -0.63
ACSS3-204	ENST00000548324	NOP9	Q86U38	636 aa	Known RBP	11.09	□□□□□ -0.63
ACSS3-204	ENST00000548324	NUDC	Q9Y266	331 aa		11.09	□□□□□ -0.63
ACSS3-204	ENST00000548324	RPRD2	Q5VT52	1461 aa	Known RBP	11.09	□□□□□ -0.63
ACSS3-204	ENST00000548324	CCDC102A	Q96A19	550 aa		11.09	□□□□□ -0.63
ACSS3-204	ENST00000548324	TRAPPC8	Q9Y2L5	1435 aa		11.08	□□□□□ -0.63
ACSS3-204	ENST00000548324	WDHD1	O75717	1129 aa	Predicted RBP	11.08	□□□□□ -0.64
ACSS3-204	ENST00000548324	RECK	O95980	971 aa		11.08	□□□□□ -0.64
ACSS3-204	ENST00000548324	CCDC96	Q2M329	555 aa		11.08	□□□□□ -0.64
ACSS3-204	ENST00000548324	HSP90AB2P	Q58FF8	381 aa		11.08	□□□□□ -0.64
ACSS3-204	ENST00000548324	MRS2	Q9HD23	443 aa		11.08	□□□□□ -0.64
ACSS3-204	ENST00000548324	DAPK1	P53355	1430 aa		11.08	□□□□□ -0.64
ACSS3-204	ENST00000548324	FRMPD1	Q5SYB0	1578 aa		11.08	□□□□□ -0.64
ACSS3-204	ENST00000548324	TLDC2	A0PJX2	215 aa		11.08	□□□□□ -0.64
ACSS3-204	ENST00000548324	BDNF	P23560	247 aa		11.08	□□□□□ -0.64
ACSS3-204	ENST00000548324	CCDC146	Q8IYE0	955 aa		11.08	□□□□□ -0.64
ACSS3-204	ENST00000548324	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.08	□□□□□ -0.64
ACSS3-204	ENST00000548324	LIG1	P18858	919 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms