RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 STRCQ7RTU9 1775 aa18.2■□□□□ 0.5
SMPDL3B-205ENST00000548116 PMFBP1Q8TBY8 1022 aa18.19■□□□□ 0.5
SMPDL3B-205ENST00000548116 ZRANB1Q9UGI0 708 aa18.19■□□□□ 0.5
SMPDL3B-205ENST00000548116 TTC21BQ7Z4L5 1316 aa18.19■□□□□ 0.5
SMPDL3B-205ENST00000548116 COL3A1P02461 1466 aaPredicted RBP18.17■□□□□ 0.5
SMPDL3B-205ENST00000548116 PROSER2Q86WR7 435 aaPredicted RBP18.16■□□□□ 0.5
SMPDL3B-205ENST00000548116 CFAP53Q96M91 514 aa18.15■□□□□ 0.5
SMPDL3B-205ENST00000548116 FBLN1P23142 703 aa18.15■□□□□ 0.5
SMPDL3B-205ENST00000548116 NGDNQ8NEJ9 315 aaKnown RBP18.15■□□□□ 0.5
SMPDL3B-205ENST00000548116 PNPLA6Q8IY17 1366 aa18.14■□□□□ 0.49
SMPDL3B-205ENST00000548116 COG3Q96JB2 828 aa18.13■□□□□ 0.49
SMPDL3B-205ENST00000548116 POLKQ9UBT6 870 aa18.13■□□□□ 0.49
SMPDL3B-205ENST00000548116 MAP2P11137 1827 aaKnown RBP18.13■□□□□ 0.49
SMPDL3B-205ENST00000548116 OVOS2A0A0J9YW53 1432 aa18.13■□□□□ 0.49
SMPDL3B-205ENST00000548116 OVOS2Q6IE36 1432 aa18.13■□□□□ 0.49
SMPDL3B-205ENST00000548116 AATKQ6ZMQ8 1374 aa18.13■□□□□ 0.49
SMPDL3B-205ENST00000548116 SMG6Q86US8 1419 aaKnown RBP18.12■□□□□ 0.49
SMPDL3B-205ENST00000548116 C14orf37Q86TY3 774 aa18.12■□□□□ 0.49
SMPDL3B-205ENST00000548116 SALL2Q9Y467 1007 aaPredicted RBP18.12■□□□□ 0.49
SMPDL3B-205ENST00000548116 TTC21AQ8NDW8 1320 aa18.12■□□□□ 0.49
SMPDL3B-205ENST00000548116 CCDC146Q8IYE0 955 aa18.11■□□□□ 0.49
SMPDL3B-205ENST00000548116 PHF8Q9UPP1 1060 aa18.11■□□□□ 0.49
SMPDL3B-205ENST00000548116 TMEM94Q12767 1356 aa18.1■□□□□ 0.49
SMPDL3B-205ENST00000548116 PIK3C2AO00443 1686 aa18.09■□□□□ 0.49
SMPDL3B-205ENST00000548116 C19orf44Q9H6X5 657 aa18.09■□□□□ 0.49
SMPDL3B-205ENST00000548116 NCOA3Q9Y6Q9 1424 aa18.09■□□□□ 0.49
SMPDL3B-205ENST00000548116 NUDCQ9Y266 331 aa18.08■□□□□ 0.49
SMPDL3B-205ENST00000548116 EMILIN1Q9Y6C2 1016 aa18.08■□□□□ 0.49
SMPDL3B-205ENST00000548116 USP31Q70CQ4 1352 aa18.08■□□□□ 0.49
SMPDL3B-205ENST00000548116 CDK12Q9NYV4 1490 aaPredicted RBP18.06■□□□□ 0.48
SMPDL3B-205ENST00000548116 ZNF521Q96K83 1311 aa18.06■□□□□ 0.48
SMPDL3B-205ENST00000548116 APAF1O14727 1248 aa18.06■□□□□ 0.48
SMPDL3B-205ENST00000548116 PDE3BQ13370 1112 aa18.06■□□□□ 0.48
SMPDL3B-205ENST00000548116 ESCO1Q5FWF5 840 aa18.06■□□□□ 0.48
SMPDL3B-205ENST00000548116 RRS1Q15050 365 aaKnown RBP18.06■□□□□ 0.48
SMPDL3B-205ENST00000548116 ORAI2Q96SN7 254 aa18.06■□□□□ 0.48
SMPDL3B-205ENST00000548116 MARF1Q9Y4F3 1742 aaKnown RBP18.05■□□□□ 0.48
SMPDL3B-205ENST00000548116 C1orf167Q5SNV9 1468 aa18.05■□□□□ 0.48
SMPDL3B-205ENST00000548116 USP54Q70EL1 1684 aa18.05■□□□□ 0.48
SMPDL3B-205ENST00000548116 DIAPH1O60610 1272 aaKnown RBP18.05■□□□□ 0.48
SMPDL3B-205ENST00000548116 U2AF1L5P0DN76 240 aaPredicted RBP18.05■□□□□ 0.48
SMPDL3B-205ENST00000548116 U2AF1Q01081 240 aaKnown RBP eCLIP18.05■□□□□ 0.48
SMPDL3B-205ENST00000548116 XIRP1Q702N8 1843 aaKnown RBP18.05■□□□□ 0.48
SMPDL3B-205ENST00000548116 DCCP43146 1447 aa18.05■□□□□ 0.48
SMPDL3B-205ENST00000548116 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
SMPDL3B-205ENST00000548116 RUNDC1Q96C34 613 aa18.04■□□□□ 0.48
SMPDL3B-205ENST00000548116 IQSEC2Q5JU85 1478 aa18.04■□□□□ 0.48
SMPDL3B-205ENST00000548116 CDCA7LQ96GN5 454 aa18.04■□□□□ 0.48
SMPDL3B-205ENST00000548116 SUPT16HQ9Y5B9 1047 aaKnown RBP18.04■□□□□ 0.48
SMPDL3B-205ENST00000548116 MST1RQ04912 1400 aa18.03■□□□□ 0.48
SMPDL3B-205ENST00000548116 U2SURPO15042 1029 aaKnown RBP18.02■□□□□ 0.47
SMPDL3B-205ENST00000548116 ZNF335Q9H4Z2 1342 aaPredicted RBP18.01■□□□□ 0.47
SMPDL3B-205ENST00000548116 PEAK1Q9H792 1746 aa18.01■□□□□ 0.47
SMPDL3B-205ENST00000548116 LRRC7Q96NW7 1537 aa18■□□□□ 0.47
SMPDL3B-205ENST00000548116 IL13P35225 146 aa18■□□□□ 0.47
SMPDL3B-205ENST00000548116 NGEFQ8N5V2 710 aa18■□□□□ 0.47
SMPDL3B-205ENST00000548116 PLEKHF1Q96S99 279 aa18■□□□□ 0.47
SMPDL3B-205ENST00000548116 KIF1AQ12756 1690 aa18■□□□□ 0.47
SMPDL3B-205ENST00000548116 ATF3P18847 181 aa18■□□□□ 0.47
SMPDL3B-205ENST00000548116 NLRP6P59044 892 aa18■□□□□ 0.47
SMPDL3B-205ENST00000548116 PSME1Q06323 249 aa18■□□□□ 0.47
SMPDL3B-205ENST00000548116 TCP11L2Q8N4U5 519 aa18■□□□□ 0.47
SMPDL3B-205ENST00000548116 PAK3O75914 559 aaPredicted RBP17.99■□□□□ 0.47
SMPDL3B-205ENST00000548116 ABTB2Q8N961 1025 aa17.99■□□□□ 0.47
SMPDL3B-205ENST00000548116 FOXO3O43524 673 aa17.98■□□□□ 0.47
SMPDL3B-205ENST00000548116 NUTM2GQ5VZR2 741 aa17.98■□□□□ 0.47
SMPDL3B-205ENST00000548116 PHF23Q9BUL5 403 aaPredicted RBP17.97■□□□□ 0.47
SMPDL3B-205ENST00000548116 MAP3K19Q56UN5 1328 aa17.97■□□□□ 0.47
SMPDL3B-205ENST00000548116 TRPM3Q9HCF6 1732 aaPredicted RBP17.97■□□□□ 0.47
SMPDL3B-205ENST00000548116 MSH6P52701 1360 aa17.96■□□□□ 0.47
SMPDL3B-205ENST00000548116 SOX12O15370 315 aa17.96■□□□□ 0.47
SMPDL3B-205ENST00000548116 CADPS2Q86UW7 1296 aa17.96■□□□□ 0.47
SMPDL3B-205ENST00000548116 GOLGA2Q08379 1002 aa17.96■□□□□ 0.47
SMPDL3B-205ENST00000548116 RRP7AQ9Y3A4 280 aaKnown RBP17.96■□□□□ 0.47
SMPDL3B-205ENST00000548116 FCHSD2O94868 740 aa17.95■□□□□ 0.46
SMPDL3B-205ENST00000548116 FKBP8Q14318 412 aa17.95■□□□□ 0.46
SMPDL3B-205ENST00000548116 NCBP3Q53F19 620 aaKnown RBP17.95■□□□□ 0.46
SMPDL3B-205ENST00000548116 WWC1Q8IX03 1113 aa17.95■□□□□ 0.46
SMPDL3B-205ENST00000548116 RSPH6AQ9H0K4 717 aa17.95■□□□□ 0.46
SMPDL3B-205ENST00000548116 XPCQ01831 940 aaPredicted RBP17.94■□□□□ 0.46
SMPDL3B-205ENST00000548116 DMRT2Q9Y5R5 561 aa17.94■□□□□ 0.46
SMPDL3B-205ENST00000548116 SLFN5Q08AF3 891 aa17.94■□□□□ 0.46
SMPDL3B-205ENST00000548116 EIF4A2Q14240 407 aaKnown RBP17.94■□□□□ 0.46
SMPDL3B-205ENST00000548116 DUSP27Q5VZP5 1158 aa17.94■□□□□ 0.46
SMPDL3B-205ENST00000548116 TRMT2AQ8IZ69 625 aaKnown RBP17.94■□□□□ 0.46
SMPDL3B-205ENST00000548116 SPINK5Q9NQ38 1064 aaPredicted RBP17.94■□□□□ 0.46
SMPDL3B-205ENST00000548116 RNF123Q5XPI4 1314 aa17.93■□□□□ 0.46
SMPDL3B-205ENST00000548116 SBNO1A3KN83 1393 aa17.93■□□□□ 0.46
SMPDL3B-205ENST00000548116 NEFLP07196 543 aa17.93■□□□□ 0.46
SMPDL3B-205ENST00000548116 CCDC27Q2M243 656 aa17.93■□□□□ 0.46
SMPDL3B-205ENST00000548116 HSP90AB2PQ58FF8 381 aa17.93■□□□□ 0.46
SMPDL3B-205ENST00000548116 KRT28Q7Z3Y7 464 aa17.93■□□□□ 0.46
SMPDL3B-205ENST00000548116 NEUROD2Q15784 382 aa17.92■□□□□ 0.46
SMPDL3B-205ENST00000548116 NFAT5O94916 1531 aa17.92■□□□□ 0.46
SMPDL3B-205ENST00000548116 FLT4P35916 1363 aa17.92■□□□□ 0.46
SMPDL3B-205ENST00000548116 RGPD1P0DJD0 1748 aa17.91■□□□□ 0.46
SMPDL3B-205ENST00000548116 HMOX1P09601 288 aa17.91■□□□□ 0.46
SMPDL3B-205ENST00000548116 PNNQ9H307 717 aaKnown RBP17.91■□□□□ 0.46
SMPDL3B-205ENST00000548116 PRKAR2BP31323 418 aa17.9■□□□□ 0.46
SMPDL3B-205ENST00000548116 TMPOP42166 694 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms