RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 E9PSI1 815 aa15.43■□□□□ 0.06
RNF41-203ENST00000547967 POLKQ9UBT6 870 aa15.43■□□□□ 0.06
RNF41-203ENST00000547967 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.43■□□□□ 0.06
RNF41-203ENST00000547967 DIAPH1O60610 1272 aaKnown RBP15.42■□□□□ 0.06
RNF41-203ENST00000547967 TRMT2AQ8IZ69 625 aaKnown RBP15.42■□□□□ 0.06
RNF41-203ENST00000547967 EDC4Q6P2E9 1401 aaKnown RBP15.42■□□□□ 0.06
RNF41-203ENST00000547967 KCNA6P17658 529 aa15.42■□□□□ 0.06
RNF41-203ENST00000547967 EMILIN1Q9Y6C2 1016 aa15.42■□□□□ 0.06
RNF41-203ENST00000547967 NGEFQ8N5V2 710 aa15.41■□□□□ 0.06
RNF41-203ENST00000547967 PMFBP1Q8TBY8 1022 aa15.41■□□□□ 0.06
RNF41-203ENST00000547967 ACEP12821 1306 aa15.41■□□□□ 0.06
RNF41-203ENST00000547967 C20orf194Q5TEA3 1177 aa15.41■□□□□ 0.06
RNF41-203ENST00000547967 COG3Q96JB2 828 aa15.41■□□□□ 0.06
RNF41-203ENST00000547967 ZNF692Q9BU19 519 aaPredicted RBP15.41■□□□□ 0.06
RNF41-203ENST00000547967 RBM33Q96EV2 1170 aaKnown RBP15.4■□□□□ 0.06
RNF41-203ENST00000547967 CEP170BQ9Y4F5 1589 aaPredicted RBP15.4■□□□□ 0.06
RNF41-203ENST00000547967 RRS1Q15050 365 aaKnown RBP15.4■□□□□ 0.06
RNF41-203ENST00000547967 ANKLE2Q86XL3 938 aa15.4■□□□□ 0.06
RNF41-203ENST00000547967 KIF20BQ96Q89 1820 aa15.4■□□□□ 0.06
RNF41-203ENST00000547967 ANKRD26Q9UPS8 1709 aa15.39■□□□□ 0.05
RNF41-203ENST00000547967 CDC42BPGQ6DT37 1551 aa15.38■□□□□ 0.05
RNF41-203ENST00000547967 BCAR3O75815 825 aa15.38■□□□□ 0.05
RNF41-203ENST00000547967 PLEKHF1Q96S99 279 aa15.38■□□□□ 0.05
RNF41-203ENST00000547967 CRBNQ96SW2 442 aa15.38■□□□□ 0.05
RNF41-203ENST00000547967 COL3A1P02461 1466 aaPredicted RBP15.38■□□□□ 0.05
RNF41-203ENST00000547967 MAPK8IP3Q9UPT6 1336 aa15.38■□□□□ 0.05
RNF41-203ENST00000547967 SOX12O15370 315 aa15.37■□□□□ 0.05
RNF41-203ENST00000547967 NKTRP30414 1462 aaKnown RBP15.37■□□□□ 0.05
RNF41-203ENST00000547967 PNPLA6Q8IY17 1366 aa15.37■□□□□ 0.05
RNF41-203ENST00000547967 IQSEC2Q5JU85 1478 aa15.37■□□□□ 0.05
RNF41-203ENST00000547967 PLEKHG3A1L390 1219 aa15.36■□□□□ 0.05
RNF41-203ENST00000547967 HMOX1P09601 288 aa15.36■□□□□ 0.05
RNF41-203ENST00000547967 TTC21BQ7Z4L5 1316 aa15.36■□□□□ 0.05
RNF41-203ENST00000547967 TMPOP42166 694 aaKnown RBP15.35■□□□□ 0.05
RNF41-203ENST00000547967 NGDNQ8NEJ9 315 aaKnown RBP15.35■□□□□ 0.05
RNF41-203ENST00000547967 PHF23Q9BUL5 403 aaPredicted RBP15.35■□□□□ 0.05
RNF41-203ENST00000547967 MAP2P11137 1827 aaKnown RBP15.35■□□□□ 0.05
RNF41-203ENST00000547967 WDR63Q8IWG1 891 aa15.34■□□□□ 0.05
RNF41-203ENST00000547967 PTCH1Q13635 1447 aa15.34■□□□□ 0.05
RNF41-203ENST00000547967 CCDC27Q2M243 656 aa15.33■□□□□ 0.05
RNF41-203ENST00000547967 ADGRB2O60241 1585 aa15.33■□□□□ 0.04
RNF41-203ENST00000547967 PRKAR2BP31323 418 aa15.33■□□□□ 0.04
RNF41-203ENST00000547967 RIPK4P57078 832 aa15.33■□□□□ 0.04
RNF41-203ENST00000547967 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.32■□□□□ 0.04
RNF41-203ENST00000547967 ITSN1Q15811 1721 aa15.32■□□□□ 0.04
RNF41-203ENST00000547967 ADAMTSL3P82987 1691 aa15.32■□□□□ 0.04
RNF41-203ENST00000547967 TRIM35Q9UPQ4 493 aa15.32■□□□□ 0.04
RNF41-203ENST00000547967 RBM19Q9Y4C8 960 aaKnown RBP15.32■□□□□ 0.04
RNF41-203ENST00000547967 MON2Q7Z3U7 1717 aa15.32■□□□□ 0.04
RNF41-203ENST00000547967 FCHSD2O94868 740 aa15.31■□□□□ 0.04
RNF41-203ENST00000547967 DIP2AQ14689 1571 aa15.31■□□□□ 0.04
RNF41-203ENST00000547967 SETD1BQ9UPS6 1966 aaKnown RBP15.31■□□□□ 0.04
RNF41-203ENST00000547967 USP6P35125 1406 aa15.31■□□□□ 0.04
RNF41-203ENST00000547967 IL13P35225 146 aa15.31■□□□□ 0.04
RNF41-203ENST00000547967 TSR2Q969E8 191 aaKnown RBP15.31■□□□□ 0.04
RNF41-203ENST00000547967 AKAP12Q02952 1782 aa15.31■□□□□ 0.04
RNF41-203ENST00000547967 PHACTR3Q96KR7 559 aa15.31■□□□□ 0.04
RNF41-203ENST00000547967 RSPH6AQ9H0K4 717 aa15.31■□□□□ 0.04
RNF41-203ENST00000547967 PNNQ9H307 717 aaKnown RBP15.31■□□□□ 0.04
RNF41-203ENST00000547967 NEFMP07197 916 aa15.3■□□□□ 0.04
RNF41-203ENST00000547967 BCL2L13Q9BXK5 485 aa15.3■□□□□ 0.04
RNF41-203ENST00000547967 AATKQ6ZMQ8 1374 aa15.3■□□□□ 0.04
RNF41-203ENST00000547967 NUTM2GQ5VZR2 741 aa15.29■□□□□ 0.04
RNF41-203ENST00000547967 FRAT1Q92837 279 aaPredicted RBP15.29■□□□□ 0.04
RNF41-203ENST00000547967 MYH16Q9H6N6 1097 aa15.29■□□□□ 0.04
RNF41-203ENST00000547967 RGPD8O14715 1765 aaPredicted RBP15.29■□□□□ 0.04
RNF41-203ENST00000547967 CANXP27824 592 aaKnown RBP15.29■□□□□ 0.04
RNF41-203ENST00000547967 PIK3R4Q99570 1358 aa15.28■□□□□ 0.04
RNF41-203ENST00000547967 XRN1Q8IZH2 1706 aaKnown RBP15.28■□□□□ 0.04
RNF41-203ENST00000547967 TOPAZ1Q8N9V7 1692 aa15.27■□□□□ 0.04
RNF41-203ENST00000547967 C14orf37Q86TY3 774 aa15.27■□□□□ 0.04
RNF41-203ENST00000547967 PAK3O75914 559 aaPredicted RBP15.27■□□□□ 0.03
RNF41-203ENST00000547967 RARSP54136 660 aaKnown RBP15.27■□□□□ 0.03
RNF41-203ENST00000547967 HSP90AB2PQ58FF8 381 aa15.27■□□□□ 0.03
RNF41-203ENST00000547967 FANCIQ9NVI1 1328 aa15.26■□□□□ 0.03
RNF41-203ENST00000547967 NCBP3Q53F19 620 aaKnown RBP15.26■□□□□ 0.03
RNF41-203ENST00000547967 LAS1LQ9Y4W2 734 aaKnown RBP15.26■□□□□ 0.03
RNF41-203ENST00000547967 LRRC7Q96NW7 1537 aa15.25■□□□□ 0.03
RNF41-203ENST00000547967 CDK12Q9NYV4 1490 aaPredicted RBP15.25■□□□□ 0.03
RNF41-203ENST00000547967 NLRP6P59044 892 aa15.25■□□□□ 0.03
RNF41-203ENST00000547967 THUMPD2Q9BTF0 503 aaKnown RBP15.25■□□□□ 0.03
RNF41-203ENST00000547967 EXOSC9Q06265 439 aaKnown RBP15.25■□□□□ 0.03
RNF41-203ENST00000547967 EIF4A2Q14240 407 aaKnown RBP15.25■□□□□ 0.03
RNF41-203ENST00000547967 PANK1Q8TE04 598 aa15.24■□□□□ 0.03
RNF41-203ENST00000547967 OVOS2A0A0J9YW53 1432 aa15.24■□□□□ 0.03
RNF41-203ENST00000547967 OVOS2Q6IE36 1432 aa15.24■□□□□ 0.03
RNF41-203ENST00000547967 SSH2Q76I76 1423 aa15.24■□□□□ 0.03
RNF41-203ENST00000547967 AEBP1Q8IUX7 1158 aa15.24■□□□□ 0.03
RNF41-203ENST00000547967 ZNF142P52746 1687 aaPredicted RBP15.23■□□□□ 0.03
RNF41-203ENST00000547967 TTC21AQ8NDW8 1320 aa15.23■□□□□ 0.03
RNF41-203ENST00000547967 NPHP4O75161 1426 aaPredicted RBP15.23■□□□□ 0.03
RNF41-203ENST00000547967 SULT6B1Q6IMI4 303 aa15.23■□□□□ 0.03
RNF41-203ENST00000547967 NRKQ7Z2Y5 1582 aa15.23■□□□□ 0.03
RNF41-203ENST00000547967 NFE2L2Q16236 605 aa15.23■□□□□ 0.03
RNF41-203ENST00000547967 SKAP1Q86WV1 359 aa15.23■□□□□ 0.03
RNF41-203ENST00000547967 ABTB2Q8N961 1025 aa15.23■□□□□ 0.03
RNF41-203ENST00000547967 ESCO1Q5FWF5 840 aa15.22■□□□□ 0.03
RNF41-203ENST00000547967 COG6Q9Y2V7 657 aa15.22■□□□□ 0.03
RNF41-203ENST00000547967 MAP3K19Q56UN5 1328 aa15.22■□□□□ 0.03
RNF41-203ENST00000547967 PHF8Q9UPP1 1060 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms