RNA–Protein interactions for RNA: ENST00000547693.5

CACNB3-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 477 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-206ENST00000547693 TOPAZ1Q8N9V7 1692 aa14.13□□□□□ -0.15
CACNB3-206ENST00000547693 MYBBP1AQ9BQG0 1328 aaKnown RBP14.13□□□□□ -0.15
CACNB3-206ENST00000547693 CD163L1Q9NR16 1453 aa14.12□□□□□ -0.15
CACNB3-206ENST00000547693 USP32Q8NFA0 1604 aa14.12□□□□□ -0.15
CACNB3-206ENST00000547693 POTEAQ6S8J7 498 aa14.12□□□□□ -0.15
CACNB3-206ENST00000547693 TTC21AQ8NDW8 1320 aa14.12□□□□□ -0.15
CACNB3-206ENST00000547693 AKAP12Q02952 1782 aa14.11□□□□□ -0.15
CACNB3-206ENST00000547693 PARD3Q8TEW0 1356 aa14.11□□□□□ -0.15
CACNB3-206ENST00000547693 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.11□□□□□ -0.15
CACNB3-206ENST00000547693 C1orf167Q5SNV9 1468 aa14.11□□□□□ -0.15
CACNB3-206ENST00000547693 FYB1O15117 783 aa14.1□□□□□ -0.15
CACNB3-206ENST00000547693 SLAIN2Q9P270 581 aa14.1□□□□□ -0.15
CACNB3-206ENST00000547693 TTC21BQ7Z4L5 1316 aa14.1□□□□□ -0.15
CACNB3-206ENST00000547693 USP6P35125 1406 aa14.09□□□□□ -0.15
CACNB3-206ENST00000547693 NLRP13Q86W25 1043 aa14.09□□□□□ -0.15
CACNB3-206ENST00000547693 COG3Q96JB2 828 aa14.09□□□□□ -0.15
CACNB3-206ENST00000547693 ORAI2Q96SN7 254 aa14.09□□□□□ -0.15
CACNB3-206ENST00000547693 MST1RQ04912 1400 aa14.08□□□□□ -0.15
CACNB3-206ENST00000547693 MON2Q7Z3U7 1717 aa14.08□□□□□ -0.16
CACNB3-206ENST00000547693 GGNBP2Q9H3C7 697 aa14.08□□□□□ -0.16
CACNB3-206ENST00000547693 KIF1AQ12756 1690 aa14.07□□□□□ -0.16
CACNB3-206ENST00000547693 FOXO3O43524 673 aa14.07□□□□□ -0.16
CACNB3-206ENST00000547693 PAK3O75914 559 aaPredicted RBP14.07□□□□□ -0.16
CACNB3-206ENST00000547693 KRT28Q7Z3Y7 464 aa14.06□□□□□ -0.16
CACNB3-206ENST00000547693 MRS2Q9HD23 443 aa14.06□□□□□ -0.16
CACNB3-206ENST00000547693 ROBO1Q9Y6N7 1651 aa14.06□□□□□ -0.16
CACNB3-206ENST00000547693 NPHP3Q7Z494 1330 aa14.06□□□□□ -0.16
CACNB3-206ENST00000547693 KIF20BQ96Q89 1820 aa14.06□□□□□ -0.16
CACNB3-206ENST00000547693 PPP2R1AP30153 589 aa14.05□□□□□ -0.16
CACNB3-206ENST00000547693 ABTB2Q8N961 1025 aa14.05□□□□□ -0.16
CACNB3-206ENST00000547693 NME9Q86XW9 330 aa14.04□□□□□ -0.16
CACNB3-206ENST00000547693 NLRP6P59044 892 aa14.03□□□□□ -0.16
CACNB3-206ENST00000547693 CFAP53Q96M91 514 aa14.03□□□□□ -0.16
CACNB3-206ENST00000547693 SSH2Q76I76 1423 aa14.03□□□□□ -0.16
CACNB3-206ENST00000547693 ANKRD26Q9UPS8 1709 aa14.03□□□□□ -0.16
CACNB3-206ENST00000547693 TNNT2P45379 298 aaPredicted RBP14.02□□□□□ -0.17
CACNB3-206ENST00000547693 BRINP3Q76B58 766 aa14.02□□□□□ -0.17
CACNB3-206ENST00000547693 USP31Q70CQ4 1352 aa14.01□□□□□ -0.17
CACNB3-206ENST00000547693 SBNO1A3KN83 1393 aa13.99□□□□□ -0.17
CACNB3-206ENST00000547693 LMOD2Q6P5Q4 547 aa13.99□□□□□ -0.17
CACNB3-206ENST00000547693 KCNH5Q8NCM2 988 aa13.99□□□□□ -0.17
CACNB3-206ENST00000547693 UPF1Q92900 1129 aaKnown RBP eCLIP13.99□□□□□ -0.17
CACNB3-206ENST00000547693 NRKQ7Z2Y5 1582 aa13.99□□□□□ -0.17
CACNB3-206ENST00000547693 AATKQ6ZMQ8 1374 aa13.98□□□□□ -0.17
CACNB3-206ENST00000547693 MTHFSP49914 203 aa13.98□□□□□ -0.17
CACNB3-206ENST00000547693 PHLPP1O60346 1717 aa13.98□□□□□ -0.17
CACNB3-206ENST00000547693 XPCQ01831 940 aaPredicted RBP13.97□□□□□ -0.17
CACNB3-206ENST00000547693 WDR43Q15061 677 aaKnown RBP eCLIP13.97□□□□□ -0.17
CACNB3-206ENST00000547693 FAM9BQ8IZU0 186 aa13.97□□□□□ -0.17
CACNB3-206ENST00000547693 ZRANB1Q9UGI0 708 aa13.97□□□□□ -0.17
CACNB3-206ENST00000547693 NUDCQ9Y266 331 aa13.97□□□□□ -0.17
CACNB3-206ENST00000547693 CDK12Q9NYV4 1490 aaPredicted RBP13.97□□□□□ -0.17
CACNB3-206ENST00000547693 COL16A1Q07092 1604 aaPredicted RBP13.97□□□□□ -0.17
CACNB3-206ENST00000547693 PNISRQ8TF01 805 aaKnown RBP13.96□□□□□ -0.17
CACNB3-206ENST00000547693 OVOS2A0A0J9YW53 1432 aa13.96□□□□□ -0.18
CACNB3-206ENST00000547693 OVOS2Q6IE36 1432 aa13.96□□□□□ -0.18
CACNB3-206ENST00000547693 ARHGEF10O15013 1369 aa13.96□□□□□ -0.18
CACNB3-206ENST00000547693 SOS2Q07890 1332 aaPredicted RBP13.95□□□□□ -0.18
CACNB3-206ENST00000547693 MAP2P11137 1827 aaKnown RBP13.95□□□□□ -0.18
CACNB3-206ENST00000547693 CCDC184Q52MB2 194 aa13.95□□□□□ -0.18
CACNB3-206ENST00000547693 NUTM2GQ5VZR2 741 aa13.95□□□□□ -0.18
CACNB3-206ENST00000547693 POLKQ9UBT6 870 aa13.95□□□□□ -0.18
CACNB3-206ENST00000547693 SPATA31A3Q5VYP0 1347 aa13.94□□□□□ -0.18
CACNB3-206ENST00000547693 PPM1GO15355 546 aaPredicted RBP13.94□□□□□ -0.18
CACNB3-206ENST00000547693 LRRC59Q96AG4 307 aaKnown RBP13.94□□□□□ -0.18
CACNB3-206ENST00000547693 JCADQ9P266 1359 aa13.94□□□□□ -0.18
CACNB3-206ENST00000547693 DDX17Q92841 729 aaKnown RBP13.93□□□□□ -0.18
CACNB3-206ENST00000547693 PIK3C2AO00443 1686 aa13.93□□□□□ -0.18
CACNB3-206ENST00000547693 SHPRHQ149N8 1683 aa13.93□□□□□ -0.18
CACNB3-206ENST00000547693 TRPM3Q9HCF6 1732 aaPredicted RBP13.93□□□□□ -0.18
CACNB3-206ENST00000547693 USP54Q70EL1 1684 aa13.92□□□□□ -0.18
CACNB3-206ENST00000547693 TNS3Q68CZ2 1445 aa13.92□□□□□ -0.18
CACNB3-206ENST00000547693 AMPHP49418 695 aa13.92□□□□□ -0.18
CACNB3-206ENST00000547693 PNNQ9H307 717 aaKnown RBP13.92□□□□□ -0.18
CACNB3-206ENST00000547693 LRP6O75581 1613 aa13.92□□□□□ -0.18
CACNB3-206ENST00000547693 KIF24Q5T7B8 1368 aa13.92□□□□□ -0.18
CACNB3-206ENST00000547693 SOX12O15370 315 aa13.91□□□□□ -0.18
CACNB3-206ENST00000547693 DIAPH1O60610 1272 aaKnown RBP13.91□□□□□ -0.18
CACNB3-206ENST00000547693 GCP02774 474 aa13.91□□□□□ -0.18
CACNB3-206ENST00000547693 INSRP06213 1382 aa13.91□□□□□ -0.18
CACNB3-206ENST00000547693 PXDNQ92626 1479 aa13.91□□□□□ -0.18
CACNB3-206ENST00000547693 RRS1Q15050 365 aaKnown RBP13.9□□□□□ -0.18
CACNB3-206ENST00000547693 NHSL1Q5SYE7 1610 aa13.9□□□□□ -0.19
CACNB3-206ENST00000547693 ALS2Q96Q42 1657 aa13.89□□□□□ -0.19
CACNB3-206ENST00000547693 PNPLA6Q8IY17 1366 aa13.89□□□□□ -0.19
CACNB3-206ENST00000547693 FBLN1P23142 703 aa13.89□□□□□ -0.19
CACNB3-206ENST00000547693 HAP1P54257 671 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-206ENST00000547693 YTHDC1Q96MU7 727 aaKnown RBP13.89□□□□□ -0.19
CACNB3-206ENST00000547693 EMILIN1Q9Y6C2 1016 aa13.89□□□□□ -0.19
CACNB3-206ENST00000547693 USP19O94966 1318 aa13.89□□□□□ -0.19
CACNB3-206ENST00000547693 SMG6Q86US8 1419 aaKnown RBP13.88□□□□□ -0.19
CACNB3-206ENST00000547693 MAP3K19Q56UN5 1328 aa13.88□□□□□ -0.19
CACNB3-206ENST00000547693 SPATA31A6Q5VVP1 1343 aa13.88□□□□□ -0.19
CACNB3-206ENST00000547693 AHDC1Q5TGY3 1603 aaPredicted RBP13.87□□□□□ -0.19
CACNB3-206ENST00000547693 U2SURPO15042 1029 aaKnown RBP13.87□□□□□ -0.19
CACNB3-206ENST00000547693 NEFMP07197 916 aa13.87□□□□□ -0.19
CACNB3-206ENST00000547693 ZNF772Q68DY9 489 aaPredicted RBP13.87□□□□□ -0.19
CACNB3-206ENST00000547693 ADAMTS8Q9UP79 889 aa13.87□□□□□ -0.19
CACNB3-206ENST00000547693 FLT4P35916 1363 aa13.86□□□□□ -0.19
CACNB3-206ENST00000547693 PLEKHG5O94827 1062 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms