RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 PANK2Q9BZ23 570 aa16.01■□□□□ 0.15
CACNB3-204ENST00000547230 CABP2Q9NPB3 220 aa16.01■□□□□ 0.15
CACNB3-204ENST00000547230 HECW2Q9P2P5 1572 aa16.01■□□□□ 0.15
CACNB3-204ENST00000547230 PUS7Q96PZ0 661 aaKnown RBP16■□□□□ 0.15
CACNB3-204ENST00000547230 ZNF692Q9BU19 519 aaPredicted RBP16■□□□□ 0.15
CACNB3-204ENST00000547230 U2SURPO15042 1029 aaKnown RBP16■□□□□ 0.15
CACNB3-204ENST00000547230 TMEM57Q8N5G2 664 aa16■□□□□ 0.15
CACNB3-204ENST00000547230 NOB1Q9ULX3 412 aaKnown RBP16■□□□□ 0.15
CACNB3-204ENST00000547230 A0A1W2PP64 1363 aa15.99■□□□□ 0.15
CACNB3-204ENST00000547230 RPGRIP1LQ68CZ1 1315 aa15.99■□□□□ 0.15
CACNB3-204ENST00000547230 TRAK2O60296 914 aa15.99■□□□□ 0.15
CACNB3-204ENST00000547230 NUTM2DQ5VT03 806 aaPredicted RBP15.99■□□□□ 0.15
CACNB3-204ENST00000547230 SIGLEC1Q9BZZ2 1709 aa15.99■□□□□ 0.15
CACNB3-204ENST00000547230 NCOA3Q9Y6Q9 1424 aa15.99■□□□□ 0.15
CACNB3-204ENST00000547230 RIMBP3CA6NJZ7 1639 aa15.99■□□□□ 0.15
CACNB3-204ENST00000547230 RIMBP3BA6NNM3 1639 aa15.99■□□□□ 0.15
CACNB3-204ENST00000547230 ABCC11Q96J66 1382 aa15.99■□□□□ 0.15
CACNB3-204ENST00000547230 RIMBP3Q9UFD9 1639 aa15.99■□□□□ 0.15
CACNB3-204ENST00000547230 HSCBQ8IWL3 235 aa15.98■□□□□ 0.15
CACNB3-204ENST00000547230 NEXMIFQ5QGS0 1516 aa15.98■□□□□ 0.15
CACNB3-204ENST00000547230 ZBTB40Q9NUA8 1239 aa15.98■□□□□ 0.15
CACNB3-204ENST00000547230 ANKRD26Q9UPS8 1709 aa15.98■□□□□ 0.15
CACNB3-204ENST00000547230 GGT6Q6P531 493 aa15.97■□□□□ 0.15
CACNB3-204ENST00000547230 ABCC3O15438 1527 aa15.97■□□□□ 0.15
CACNB3-204ENST00000547230 ASXL2Q76L83 1435 aa15.97■□□□□ 0.15
CACNB3-204ENST00000547230 SAFB2Q14151 953 aaKnown RBP eCLIP15.97■□□□□ 0.15
CACNB3-204ENST00000547230 GGNBP2Q9H3C7 697 aa15.97■□□□□ 0.15
CACNB3-204ENST00000547230 PIK3C2BO00750 1634 aa15.96■□□□□ 0.15
CACNB3-204ENST00000547230 IL16Q14005 1332 aa15.96■□□□□ 0.15
CACNB3-204ENST00000547230 DDIT3P35638 169 aa15.95■□□□□ 0.14
CACNB3-204ENST00000547230 UBE2Q2Q8WVN8 375 aa15.95■□□□□ 0.14
CACNB3-204ENST00000547230 RBM25P49756 843 aaKnown RBP15.95■□□□□ 0.14
CACNB3-204ENST00000547230 CFAP74Q9C0B2 1584 aa15.95■□□□□ 0.14
CACNB3-204ENST00000547230 NUCB1Q02818 461 aa15.94■□□□□ 0.14
CACNB3-204ENST00000547230 LNPKQ9C0E8 428 aa15.94■□□□□ 0.14
CACNB3-204ENST00000547230 KIF16BQ96L93 1317 aa15.94■□□□□ 0.14
CACNB3-204ENST00000547230 DDX11L8A8MPP1 907 aa15.93■□□□□ 0.14
CACNB3-204ENST00000547230 RIPK4P57078 832 aa15.93■□□□□ 0.14
CACNB3-204ENST00000547230 POGZQ7Z3K3 1410 aa15.92■□□□□ 0.14
CACNB3-204ENST00000547230 SNX21Q969T3 373 aa15.92■□□□□ 0.14
CACNB3-204ENST00000547230 MRE11P49959 708 aa15.92■□□□□ 0.14
CACNB3-204ENST00000547230 MED14O60244 1454 aa15.91■□□□□ 0.14
CACNB3-204ENST00000547230 CD163L1Q9NR16 1453 aa15.91■□□□□ 0.14
CACNB3-204ENST00000547230 VGFO15240 615 aaPredicted RBP15.91■□□□□ 0.14
CACNB3-204ENST00000547230 IPO8O15397 1037 aaKnown RBP15.91■□□□□ 0.14
CACNB3-204ENST00000547230 SRPK2P78362 688 aaKnown RBP15.91■□□□□ 0.14
CACNB3-204ENST00000547230 CHD1LQ86WJ1 897 aa15.91■□□□□ 0.14
CACNB3-204ENST00000547230 MLH3Q9UHC1 1453 aa15.9■□□□□ 0.14
CACNB3-204ENST00000547230 LRRC7Q96NW7 1537 aa15.9■□□□□ 0.14
CACNB3-204ENST00000547230 FYB1O15117 783 aa15.9■□□□□ 0.14
CACNB3-204ENST00000547230 CLCN1P35523 988 aa15.9■□□□□ 0.14
CACNB3-204ENST00000547230 GRPEL1Q9HAV7 217 aa15.9■□□□□ 0.14
CACNB3-204ENST00000547230 TNPO1Q92973 898 aaKnown RBP15.9■□□□□ 0.14
CACNB3-204ENST00000547230 ALDH1L2Q3SY69 923 aa15.89■□□□□ 0.13
CACNB3-204ENST00000547230 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
CACNB3-204ENST00000547230 STK26Q9P289 416 aa15.89■□□□□ 0.13
CACNB3-204ENST00000547230 KIF2CQ99661 725 aa15.89■□□□□ 0.13
CACNB3-204ENST00000547230 CLTCQ00610 1675 aaKnown RBP15.88■□□□□ 0.13
CACNB3-204ENST00000547230 DIAPH1O60610 1272 aaKnown RBP15.88■□□□□ 0.13
CACNB3-204ENST00000547230 PTPRMP28827 1452 aa15.88■□□□□ 0.13
CACNB3-204ENST00000547230 BMP2KLQ5H9B9 411 aa15.88■□□□□ 0.13
CACNB3-204ENST00000547230 PPIP5K1Q6PFW1 1433 aa15.88■□□□□ 0.13
CACNB3-204ENST00000547230 MYO5BQ9ULV0 1848 aa15.88■□□□□ 0.13
CACNB3-204ENST00000547230 KIF20BQ96Q89 1820 aa15.88■□□□□ 0.13
CACNB3-204ENST00000547230 HSP90AB1P08238 724 aaKnown RBP15.87■□□□□ 0.13
CACNB3-204ENST00000547230 PNNQ9H307 717 aaKnown RBP15.87■□□□□ 0.13
CACNB3-204ENST00000547230 CDC42BPGQ6DT37 1551 aa15.87■□□□□ 0.13
CACNB3-204ENST00000547230 PNPLA6Q8IY17 1366 aa15.87■□□□□ 0.13
CACNB3-204ENST00000547230 CIZ1Q9ULV3 898 aaPredicted RBP15.87■□□□□ 0.13
CACNB3-204ENST00000547230 ATAD2Q6PL18 1390 aa15.86■□□□□ 0.13
CACNB3-204ENST00000547230 CD2BP2O95400 341 aaKnown RBP15.86■□□□□ 0.13
CACNB3-204ENST00000547230 RAB3GAP1Q15042 981 aa15.86■□□□□ 0.13
CACNB3-204ENST00000547230 MINK1Q8N4C8 1332 aaPredicted RBP15.86■□□□□ 0.13
CACNB3-204ENST00000547230 NAP1L5Q96NT1 182 aaPredicted RBP15.85■□□□□ 0.13
CACNB3-204ENST00000547230 C1orf115Q9H7X2 142 aa15.85■□□□□ 0.13
CACNB3-204ENST00000547230 TERF2IPQ9NYB0 399 aa15.85■□□□□ 0.13
CACNB3-204ENST00000547230 ANKRD45Q5TZF3 282 aa15.85■□□□□ 0.13
CACNB3-204ENST00000547230 GAS2L3Q86XJ1 694 aa15.85■□□□□ 0.13
CACNB3-204ENST00000547230 ISY1Q9ULR0 285 aaKnown RBP15.85■□□□□ 0.13
CACNB3-204ENST00000547230 FAM135BQ49AJ0 1406 aa15.85■□□□□ 0.13
CACNB3-204ENST00000547230 ZFYVE9O95405 1425 aa15.84■□□□□ 0.13
CACNB3-204ENST00000547230 ERBB4Q15303 1308 aa15.84■□□□□ 0.13
CACNB3-204ENST00000547230 ZBTB7BO15156 539 aaPredicted RBP15.84■□□□□ 0.13
CACNB3-204ENST00000547230 BRPF1P55201 1214 aaPredicted RBP15.84■□□□□ 0.13
CACNB3-204ENST00000547230 GBP4Q96PP9 640 aa15.84■□□□□ 0.13
CACNB3-204ENST00000547230 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
CACNB3-204ENST00000547230 PTCH1Q13635 1447 aa15.84■□□□□ 0.13
CACNB3-204ENST00000547230 PRKAR2BP31323 418 aa15.83■□□□□ 0.12
CACNB3-204ENST00000547230 TBC1D9Q6ZT07 1266 aa15.83■□□□□ 0.12
CACNB3-204ENST00000547230 PIK3R4Q99570 1358 aa15.83■□□□□ 0.12
CACNB3-204ENST00000547230 IDI1Q13907 227 aa15.83■□□□□ 0.12
CACNB3-204ENST00000547230 PRAM1Q96QH2 718 aa15.83■□□□□ 0.12
CACNB3-204ENST00000547230 FCHSD2O94868 740 aa15.82■□□□□ 0.12
CACNB3-204ENST00000547230 MRPL50Q8N5N7 158 aaKnown RBP15.82■□□□□ 0.12
CACNB3-204ENST00000547230 GCC1Q96CN9 775 aa15.82■□□□□ 0.12
CACNB3-204ENST00000547230 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
CACNB3-204ENST00000547230 SIRT2Q8IXJ6 389 aa15.81■□□□□ 0.12
CACNB3-204ENST00000547230 ZNF428Q96B54 188 aa15.81■□□□□ 0.12
CACNB3-204ENST00000547230 THUMPD2Q9BTF0 503 aaKnown RBP15.81■□□□□ 0.12
CACNB3-204ENST00000547230 ESPNB1AK53 854 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms