RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 KIF20BQ96Q89 1820 aa24.32■■□□□ 1.48
VDR-204ENST00000547065 U2SURPO15042 1029 aaKnown RBP24.32■■□□□ 1.48
VDR-204ENST00000547065 DIAPH1O60610 1272 aaKnown RBP24.32■■□□□ 1.48
VDR-204ENST00000547065 ZNF692Q9BU19 519 aaPredicted RBP24.32■■□□□ 1.48
VDR-204ENST00000547065 PNNQ9H307 717 aaKnown RBP24.31■■□□□ 1.48
VDR-204ENST00000547065 TBX22Q9Y458 520 aa24.31■■□□□ 1.48
VDR-204ENST00000547065 C20orf194Q5TEA3 1177 aa24.3■■□□□ 1.48
VDR-204ENST00000547065 PLEKHF1Q96S99 279 aa24.3■■□□□ 1.48
VDR-204ENST00000547065 FER1L4A9Z1Z3 1794 aa24.3■■□□□ 1.48
VDR-204ENST00000547065 SLC26A8Q96RN1 970 aa24.28■■□□□ 1.48
VDR-204ENST00000547065 POLKQ9UBT6 870 aa24.28■■□□□ 1.48
VDR-204ENST00000547065 CDC42BPGQ6DT37 1551 aa24.28■■□□□ 1.48
VDR-204ENST00000547065 PLPPR3Q6T4P5 718 aa24.27■■□□□ 1.48
VDR-204ENST00000547065 ADGRB2O60241 1585 aa24.26■■□□□ 1.47
VDR-204ENST00000547065 MYH16Q9H6N6 1097 aa24.26■■□□□ 1.47
VDR-204ENST00000547065 PRR36Q9H6K5 1346 aa24.25■■□□□ 1.47
VDR-204ENST00000547065 MAPK8IP3Q9UPT6 1336 aa24.25■■□□□ 1.47
VDR-204ENST00000547065 BCAR3O75815 825 aa24.24■■□□□ 1.47
VDR-204ENST00000547065 NME9Q86XW9 330 aa24.24■■□□□ 1.47
VDR-204ENST00000547065 AMOTL2Q9Y2J4 779 aa24.24■■□□□ 1.47
VDR-204ENST00000547065 PTPRUQ92729 1446 aa24.24■■□□□ 1.47
VDR-204ENST00000547065 NCKAP5LQ9HCH0 1330 aa24.24■■□□□ 1.47
VDR-204ENST00000547065 TMPOP42166 694 aaKnown RBP24.24■■□□□ 1.47
VDR-204ENST00000547065 AATKQ6ZMQ8 1374 aa24.23■■□□□ 1.47
VDR-204ENST00000547065 PLEKHG3A1L390 1219 aa24.23■■□□□ 1.47
VDR-204ENST00000547065 FCHSD2O94868 740 aa24.23■■□□□ 1.47
VDR-204ENST00000547065 COG3Q96JB2 828 aa24.23■■□□□ 1.47
VDR-204ENST00000547065 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.21■■□□□ 1.47
VDR-204ENST00000547065 FANCIQ9NVI1 1328 aa24.21■■□□□ 1.47
VDR-204ENST00000547065 PDE3AQ14432 1141 aa24.2■■□□□ 1.46
VDR-204ENST00000547065 PPM1GO15355 546 aaPredicted RBP24.19■■□□□ 1.46
VDR-204ENST00000547065 DIP2AQ14689 1571 aa24.19■■□□□ 1.46
VDR-204ENST00000547065 TCERG1O14776 1098 aaKnown RBP24.19■■□□□ 1.46
VDR-204ENST00000547065 MON2Q7Z3U7 1717 aa24.18■■□□□ 1.46
VDR-204ENST00000547065 FBLN1P23142 703 aa24.18■■□□□ 1.46
VDR-204ENST00000547065 PTCH1Q13635 1447 aa24.18■■□□□ 1.46
VDR-204ENST00000547065 ZRANB1Q9UGI0 708 aa24.18■■□□□ 1.46
VDR-204ENST00000547065 TRIM35Q9UPQ4 493 aa24.18■■□□□ 1.46
VDR-204ENST00000547065 IL16Q14005 1332 aa24.17■■□□□ 1.46
VDR-204ENST00000547065 RARSP54136 660 aaKnown RBP24.17■■□□□ 1.46
VDR-204ENST00000547065 AKAP12Q02952 1782 aa24.17■■□□□ 1.46
VDR-204ENST00000547065 ACEP12821 1306 aa24.16■■□□□ 1.46
VDR-204ENST00000547065 CT47B1P0C2W7 299 aaPredicted RBP24.16■■□□□ 1.46
VDR-204ENST00000547065 TTC21BQ7Z4L5 1316 aa24.15■■□□□ 1.46
VDR-204ENST00000547065 NEFMP07197 916 aa24.15■■□□□ 1.46
VDR-204ENST00000547065 RIPK4P57078 832 aa24.15■■□□□ 1.46
VDR-204ENST00000547065 RSPH6AQ9H0K4 717 aa24.15■■□□□ 1.46
VDR-204ENST00000547065 EMILIN1Q9Y6C2 1016 aa24.15■■□□□ 1.46
VDR-204ENST00000547065 IL13P35225 146 aa24.14■■□□□ 1.46
VDR-204ENST00000547065 ITSN1Q15811 1721 aa24.14■■□□□ 1.46
VDR-204ENST00000547065 CDK12Q9NYV4 1490 aaPredicted RBP24.13■■□□□ 1.45
VDR-204ENST00000547065 CANXP27824 592 aaKnown RBP24.13■■□□□ 1.45
VDR-204ENST00000547065 CENPQQ7L2Z9 268 aaPredicted RBP24.13■■□□□ 1.45
VDR-204ENST00000547065 MS4A1P11836 297 aa24.12■■□□□ 1.45
VDR-204ENST00000547065 PIK3R4Q99570 1358 aa24.12■■□□□ 1.45
VDR-204ENST00000547065 KDM2BQ8NHM5 1336 aa24.12■■□□□ 1.45
VDR-204ENST00000547065 MAP2P11137 1827 aaKnown RBP24.11■■□□□ 1.45
VDR-204ENST00000547065 TOPAZ1Q8N9V7 1692 aa24.11■■□□□ 1.45
VDR-204ENST00000547065 PRKAR2BP31323 418 aa24.11■■□□□ 1.45
VDR-204ENST00000547065 NUTM2FA1L443 756 aa24.09■■□□□ 1.45
VDR-204ENST00000547065 CEP170BQ9Y4F5 1589 aaPredicted RBP24.09■■□□□ 1.45
VDR-204ENST00000547065 USP6P35125 1406 aa24.09■■□□□ 1.45
VDR-204ENST00000547065 RRS1Q15050 365 aaKnown RBP24.07■■□□□ 1.44
VDR-204ENST00000547065 AAMPQ13685 434 aa24.06■■□□□ 1.44
VDR-204ENST00000547065 NFE2L2Q16236 605 aa24.06■■□□□ 1.44
VDR-204ENST00000547065 FRAT1Q92837 279 aaPredicted RBP24.06■■□□□ 1.44
VDR-204ENST00000547065 LRRC7Q96NW7 1537 aa24.06■■□□□ 1.44
VDR-204ENST00000547065 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
VDR-204ENST00000547065 TTC21AQ8NDW8 1320 aa24.05■■□□□ 1.44
VDR-204ENST00000547065 SSH2Q76I76 1423 aa24.05■■□□□ 1.44
VDR-204ENST00000547065 TSR2Q969E8 191 aaKnown RBP24.05■■□□□ 1.44
VDR-204ENST00000547065 HMOX1P09601 288 aa24.04■■□□□ 1.44
VDR-204ENST00000547065 EXOSC9Q06265 439 aaKnown RBP24.04■■□□□ 1.44
VDR-204ENST00000547065 XRN1Q8IZH2 1706 aaKnown RBP24.04■■□□□ 1.44
VDR-204ENST00000547065 NRKQ7Z2Y5 1582 aa24.04■■□□□ 1.44
VDR-204ENST00000547065 RIMS1Q86UR5 1692 aaKnown RBP24.04■■□□□ 1.44
VDR-204ENST00000547065 PANK1Q8TE04 598 aa24.03■■□□□ 1.44
VDR-204ENST00000547065 OVOS2A0A0J9YW53 1432 aa24.03■■□□□ 1.44
VDR-204ENST00000547065 OVOS2Q6IE36 1432 aa24.03■■□□□ 1.44
VDR-204ENST00000547065 KCNA6P17658 529 aa24.03■■□□□ 1.44
VDR-204ENST00000547065 CALD1Q05682 793 aaKnown RBP24.03■■□□□ 1.44
VDR-204ENST00000547065 PHACTR3Q96KR7 559 aa24.03■■□□□ 1.44
VDR-204ENST00000547065 USP31Q70CQ4 1352 aa24.02■■□□□ 1.44
VDR-204ENST00000547065 NGDNQ8NEJ9 315 aaKnown RBP24.01■■□□□ 1.43
VDR-204ENST00000547065 COG6Q9Y2V7 657 aa24.01■■□□□ 1.43
VDR-204ENST00000547065 PMFBP1Q8TBY8 1022 aa24.01■■□□□ 1.43
VDR-204ENST00000547065 DNAJC5Q9H3Z4 198 aa24.01■■□□□ 1.43
VDR-204ENST00000547065 ANKARQ7Z5J8 1434 aa24■■□□□ 1.43
VDR-204ENST00000547065 CLUAP1Q96AJ1 413 aa24■■□□□ 1.43
VDR-204ENST00000547065 BCL2L13Q9BXK5 485 aa23.98■■□□□ 1.43
VDR-204ENST00000547065 PDE4AP27815 886 aa23.98■■□□□ 1.43
VDR-204ENST00000547065 LMOD3Q0VAK6 560 aa23.98■■□□□ 1.43
VDR-204ENST00000547065 ZKSCAN2Q63HK3 967 aa23.98■■□□□ 1.43
VDR-204ENST00000547065 ADAMTSL3P82987 1691 aa23.97■■□□□ 1.43
VDR-204ENST00000547065 EIF4A2Q14240 407 aaKnown RBP23.96■■□□□ 1.43
VDR-204ENST00000547065 BACH2Q9BYV9 841 aa23.96■■□□□ 1.43
VDR-204ENST00000547065 SMC4Q9NTJ3 1288 aa23.96■■□□□ 1.43
VDR-204ENST00000547065 MSH5O43196 834 aa23.95■■□□□ 1.42
VDR-204ENST00000547065 RLBP1P12271 317 aa23.94■■□□□ 1.42
VDR-204ENST00000547065 SSH1Q8WYL5 1049 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms