RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 LRP6O75581 1613 aa20.16■□□□□ 0.82
DDX54-203ENST00000546869 ALS2Q96Q42 1657 aa20.16■□□□□ 0.82
DDX54-203ENST00000546869 KTN1Q86UP2 1357 aaKnown RBP20.16■□□□□ 0.82
DDX54-203ENST00000546869 NUTM2BA6NNL0 878 aaPredicted RBP20.15■□□□□ 0.82
DDX54-203ENST00000546869 NUTM2EB1AL46 878 aaPredicted RBP20.15■□□□□ 0.82
DDX54-203ENST00000546869 LMOD2Q6P5Q4 547 aa20.15■□□□□ 0.82
DDX54-203ENST00000546869 NUTM2AQ8IVF1 878 aaPredicted RBP20.15■□□□□ 0.82
DDX54-203ENST00000546869 TTC21AQ8NDW8 1320 aa20.15■□□□□ 0.82
DDX54-203ENST00000546869 TTC21BQ7Z4L5 1316 aa20.14■□□□□ 0.81
DDX54-203ENST00000546869 ABTB2Q8N961 1025 aa20.14■□□□□ 0.81
DDX54-203ENST00000546869 A0A1W2PP64 1363 aa20.12■□□□□ 0.81
DDX54-203ENST00000546869 ANKRD36BQ8N2N9 1353 aa20.12■□□□□ 0.81
DDX54-203ENST00000546869 NLRP13Q86W25 1043 aa20.12■□□□□ 0.81
DDX54-203ENST00000546869 AKAP12Q02952 1782 aa20.12■□□□□ 0.81
DDX54-203ENST00000546869 MEX3CQ5U5Q3 659 aaKnown RBP20.11■□□□□ 0.81
DDX54-203ENST00000546869 EDC4Q6P2E9 1401 aaKnown RBP20.1■□□□□ 0.81
DDX54-203ENST00000546869 C11orf95C9JLR9 678 aaPredicted RBP20.1■□□□□ 0.81
DDX54-203ENST00000546869 USP19O94966 1318 aa20.09■□□□□ 0.81
DDX54-203ENST00000546869 CABLES1Q8TDN4 633 aa20.09■□□□□ 0.81
DDX54-203ENST00000546869 ADAMTS2O95450 1211 aa20.08■□□□□ 0.81
DDX54-203ENST00000546869 PHF23Q9BUL5 403 aaPredicted RBP20.08■□□□□ 0.81
DDX54-203ENST00000546869 USP31Q70CQ4 1352 aa20.08■□□□□ 0.8
DDX54-203ENST00000546869 MON2Q7Z3U7 1717 aa20.07■□□□□ 0.8
DDX54-203ENST00000546869 HAP1P54257 671 aaPredicted RBP20.07■□□□□ 0.8
DDX54-203ENST00000546869 NLRP6P59044 892 aa20.07■□□□□ 0.8
DDX54-203ENST00000546869 FNBP4Q8N3X1 1017 aaPredicted RBP20.07■□□□□ 0.8
DDX54-203ENST00000546869 RGS17Q9UGC6 210 aaPredicted RBP20.07■□□□□ 0.8
DDX54-203ENST00000546869 NRKQ7Z2Y5 1582 aa20.07■□□□□ 0.8
DDX54-203ENST00000546869 ZNF772Q68DY9 489 aaPredicted RBP20.06■□□□□ 0.8
DDX54-203ENST00000546869 NUTM2GQ5VZR2 741 aa20.05■□□□□ 0.8
DDX54-203ENST00000546869 NGLY1Q96IV0 654 aa20.05■□□□□ 0.8
DDX54-203ENST00000546869 C8orf37Q96NL8 207 aa20.05■□□□□ 0.8
DDX54-203ENST00000546869 KIF7Q2M1P5 1343 aa20.04■□□□□ 0.8
DDX54-203ENST00000546869 GCP02774 474 aa20.04■□□□□ 0.8
DDX54-203ENST00000546869 CRYBG1Q9Y4K1 1723 aa20.03■□□□□ 0.8
DDX54-203ENST00000546869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.03■□□□□ 0.8
DDX54-203ENST00000546869 AFF2P51816 1311 aa20.02■□□□□ 0.8
DDX54-203ENST00000546869 KCNH5Q8NCM2 988 aa20.02■□□□□ 0.8
DDX54-203ENST00000546869 CARD14Q9BXL6 1004 aa20.02■□□□□ 0.8
DDX54-203ENST00000546869 CPDO75976 1380 aa20.02■□□□□ 0.8
DDX54-203ENST00000546869 PIK3C2AO00443 1686 aa20.02■□□□□ 0.8
DDX54-203ENST00000546869 MYOM1P52179 1685 aa20.02■□□□□ 0.8
DDX54-203ENST00000546869 ABCA3Q99758 1704 aa20.02■□□□□ 0.79
DDX54-203ENST00000546869 FAM83GA6ND36 823 aa20.01■□□□□ 0.79
DDX54-203ENST00000546869 NME9Q86XW9 330 aa20.01■□□□□ 0.79
DDX54-203ENST00000546869 SLIT3O75094 1523 aa20.01■□□□□ 0.79
DDX54-203ENST00000546869 POLR3GLQ9BT43 218 aa20■□□□□ 0.79
DDX54-203ENST00000546869 SLIT2O94813 1529 aa20■□□□□ 0.79
DDX54-203ENST00000546869 MARF1Q9Y4F3 1742 aaKnown RBP19.99■□□□□ 0.79
DDX54-203ENST00000546869 FYB1O15117 783 aa19.99■□□□□ 0.79
DDX54-203ENST00000546869 CCDC7Q96M83 1385 aa19.98■□□□□ 0.79
DDX54-203ENST00000546869 USP54Q70EL1 1684 aa19.98■□□□□ 0.79
DDX54-203ENST00000546869 PLEKHG5O94827 1062 aa19.98■□□□□ 0.79
DDX54-203ENST00000546869 PANK3Q9H999 370 aa19.98■□□□□ 0.79
DDX54-203ENST00000546869 USP21Q9UK80 565 aa19.98■□□□□ 0.79
DDX54-203ENST00000546869 WASHC2AQ641Q2 1341 aa19.98■□□□□ 0.79
DDX54-203ENST00000546869 BCL9LQ86UU0 1499 aa19.98■□□□□ 0.79
DDX54-203ENST00000546869 PHRF1Q9P1Y6 1649 aaKnown RBP19.98■□□□□ 0.79
DDX54-203ENST00000546869 OVOS2A0A0J9YW53 1432 aa19.97■□□□□ 0.79
DDX54-203ENST00000546869 OVOS2Q6IE36 1432 aa19.97■□□□□ 0.79
DDX54-203ENST00000546869 PRDM11Q9NQV5 511 aa19.97■□□□□ 0.79
DDX54-203ENST00000546869 KIAA0232Q92628 1395 aa19.96■□□□□ 0.79
DDX54-203ENST00000546869 ZC3H6P61129 1189 aaKnown RBP19.96■□□□□ 0.79
DDX54-203ENST00000546869 POTEAQ6S8J7 498 aa19.96■□□□□ 0.79
DDX54-203ENST00000546869 UNC5CLQ8IV45 518 aa19.96■□□□□ 0.79
DDX54-203ENST00000546869 ZRANB1Q9UGI0 708 aa19.96■□□□□ 0.79
DDX54-203ENST00000546869 NSD3Q9BZ95 1437 aa19.95■□□□□ 0.78
DDX54-203ENST00000546869 COG3Q96JB2 828 aa19.95■□□□□ 0.78
DDX54-203ENST00000546869 QTRT2Q9H974 415 aaKnown RBP19.95■□□□□ 0.78
DDX54-203ENST00000546869 ARHGEF25Q86VW2 580 aa19.94■□□□□ 0.78
DDX54-203ENST00000546869 TRPC5Q9UL62 973 aaPredicted RBP19.94■□□□□ 0.78
DDX54-203ENST00000546869 CGNL1Q0VF96 1302 aa19.94■□□□□ 0.78
DDX54-203ENST00000546869 COL14A1Q05707 1796 aaKnown RBP19.93■□□□□ 0.78
DDX54-203ENST00000546869 AATKQ6ZMQ8 1374 aa19.93■□□□□ 0.78
DDX54-203ENST00000546869 BTG4Q9NY30 223 aa19.92■□□□□ 0.78
DDX54-203ENST00000546869 ATRNO75882 1429 aa19.92■□□□□ 0.78
DDX54-203ENST00000546869 NFAT5O94916 1531 aa19.91■□□□□ 0.78
DDX54-203ENST00000546869 NWD2Q9ULI1 1742 aa19.9■□□□□ 0.78
DDX54-203ENST00000546869 PER1O15534 1290 aaPredicted RBP19.9■□□□□ 0.78
DDX54-203ENST00000546869 RBM6P78332 1123 aaKnown RBP19.9■□□□□ 0.78
DDX54-203ENST00000546869 VPS72Q15906 364 aa19.9■□□□□ 0.78
DDX54-203ENST00000546869 GGNBP2Q9H3C7 697 aa19.9■□□□□ 0.78
DDX54-203ENST00000546869 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.9■□□□□ 0.78
DDX54-203ENST00000546869 RXRBP28702 533 aa19.89■□□□□ 0.77
DDX54-203ENST00000546869 CHRNA2Q15822 529 aa19.89■□□□□ 0.77
DDX54-203ENST00000546869 KNSTRNQ9Y448 316 aa19.89■□□□□ 0.77
DDX54-203ENST00000546869 NSD2O96028 1365 aa19.88■□□□□ 0.77
DDX54-203ENST00000546869 ABCC6O95255 1503 aa19.87■□□□□ 0.77
DDX54-203ENST00000546869 GJD4Q96KN9 370 aaPredicted RBP19.87■□□□□ 0.77
DDX54-203ENST00000546869 PLCH1Q4KWH8 1693 aa19.87■□□□□ 0.77
DDX54-203ENST00000546869 LMO7Q8WWI1 1683 aa19.86■□□□□ 0.77
DDX54-203ENST00000546869 CAMTA1Q9Y6Y1 1673 aa19.85■□□□□ 0.77
DDX54-203ENST00000546869 CDK12Q9NYV4 1490 aaPredicted RBP19.85■□□□□ 0.77
DDX54-203ENST00000546869 SOX12O15370 315 aa19.84■□□□□ 0.77
DDX54-203ENST00000546869 AMER1Q5JTC6 1135 aaPredicted RBP19.84■□□□□ 0.77
DDX54-203ENST00000546869 ILDR2Q71H61 639 aa19.84■□□□□ 0.77
DDX54-203ENST00000546869 AXIN2Q9Y2T1 843 aa19.84■□□□□ 0.77
DDX54-203ENST00000546869 COL18A1P39060 1754 aa19.83■□□□□ 0.77
DDX54-203ENST00000546869 ONECUT3O60422 494 aaPredicted RBP19.83■□□□□ 0.77
DDX54-203ENST00000546869 EVA1CP58658 441 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms