RNA–Protein interactions for RNA: ENST00000546284.1

AP002840.1-201, humanhuman

TSL 3 BASIC

Gene AP002840.1, Length 524 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002840.1-201ENST00000546284 NSD3Q9BZ95 1437 aa13.67□□□□□ -0.22
AP002840.1-201ENST00000546284 DDX10Q13206 875 aaKnown RBP13.67□□□□□ -0.22
AP002840.1-201ENST00000546284 COL16A1Q07092 1604 aaPredicted RBP13.67□□□□□ -0.22
AP002840.1-201ENST00000546284 SBNO1A3KN83 1393 aa13.65□□□□□ -0.22
AP002840.1-201ENST00000546284 BRD4O60885 1362 aaPredicted RBP13.65□□□□□ -0.22
AP002840.1-201ENST00000546284 TTC21BQ7Z4L5 1316 aa13.64□□□□□ -0.23
AP002840.1-201ENST00000546284 TNS3Q68CZ2 1445 aa13.64□□□□□ -0.23
AP002840.1-201ENST00000546284 PER1O15534 1290 aaPredicted RBP13.64□□□□□ -0.23
AP002840.1-201ENST00000546284 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
AP002840.1-201ENST00000546284 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.64□□□□□ -0.23
AP002840.1-201ENST00000546284 FBXO41Q8TF61 875 aa13.64□□□□□ -0.23
AP002840.1-201ENST00000546284 SPATA31A3Q5VYP0 1347 aa13.64□□□□□ -0.23
AP002840.1-201ENST00000546284 PIK3C2AO00443 1686 aa13.63□□□□□ -0.23
AP002840.1-201ENST00000546284 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
AP002840.1-201ENST00000546284 HSPA1LP34931 641 aa13.63□□□□□ -0.23
AP002840.1-201ENST00000546284 TTC21AQ8NDW8 1320 aa13.63□□□□□ -0.23
AP002840.1-201ENST00000546284 NME9Q86XW9 330 aa13.62□□□□□ -0.23
AP002840.1-201ENST00000546284 KNSTRNQ9Y448 316 aa13.62□□□□□ -0.23
AP002840.1-201ENST00000546284 LMOD2Q6P5Q4 547 aa13.61□□□□□ -0.23
AP002840.1-201ENST00000546284 ABTB2Q8N961 1025 aa13.61□□□□□ -0.23
AP002840.1-201ENST00000546284 LRRC59Q96AG4 307 aaKnown RBP13.61□□□□□ -0.23
AP002840.1-201ENST00000546284 KIF20BQ96Q89 1820 aa13.61□□□□□ -0.23
AP002840.1-201ENST00000546284 CGNL1Q0VF96 1302 aa13.61□□□□□ -0.23
AP002840.1-201ENST00000546284 ARHGEF10O15013 1369 aa13.6□□□□□ -0.23
AP002840.1-201ENST00000546284 FYB1O15117 783 aa13.6□□□□□ -0.23
AP002840.1-201ENST00000546284 AMER1Q5JTC6 1135 aaPredicted RBP13.6□□□□□ -0.23
AP002840.1-201ENST00000546284 NUTM2GQ5VZR2 741 aa13.6□□□□□ -0.23
AP002840.1-201ENST00000546284 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
AP002840.1-201ENST00000546284 PNPLA6Q8IY17 1366 aa13.59□□□□□ -0.23
AP002840.1-201ENST00000546284 MARF1Q9Y4F3 1742 aaKnown RBP13.59□□□□□ -0.23
AP002840.1-201ENST00000546284 GGNBP2Q9H3C7 697 aa13.59□□□□□ -0.23
AP002840.1-201ENST00000546284 MED1Q15648 1581 aaPredicted RBP13.58□□□□□ -0.23
AP002840.1-201ENST00000546284 OVOS2A0A0J9YW53 1432 aa13.58□□□□□ -0.24
AP002840.1-201ENST00000546284 OVOS2Q6IE36 1432 aa13.58□□□□□ -0.24
AP002840.1-201ENST00000546284 NLRP6P59044 892 aa13.58□□□□□ -0.24
AP002840.1-201ENST00000546284 USP54Q70EL1 1684 aa13.58□□□□□ -0.24
AP002840.1-201ENST00000546284 USP31Q70CQ4 1352 aa13.58□□□□□ -0.24
AP002840.1-201ENST00000546284 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
AP002840.1-201ENST00000546284 USP19O94966 1318 aa13.57□□□□□ -0.24
AP002840.1-201ENST00000546284 NSD2O96028 1365 aa13.57□□□□□ -0.24
AP002840.1-201ENST00000546284 COL22A1Q8NFW1 1626 aaPredicted RBP13.57□□□□□ -0.24
AP002840.1-201ENST00000546284 NPC1L1Q9UHC9 1359 aa13.57□□□□□ -0.24
AP002840.1-201ENST00000546284 SHPRHQ149N8 1683 aa13.56□□□□□ -0.24
AP002840.1-201ENST00000546284 CRYBG1Q9Y4K1 1723 aa13.56□□□□□ -0.24
AP002840.1-201ENST00000546284 CC2D1BQ5T0F9 858 aaKnown RBP13.56□□□□□ -0.24
AP002840.1-201ENST00000546284 NLRP13Q86W25 1043 aa13.56□□□□□ -0.24
AP002840.1-201ENST00000546284 JCADQ9P266 1359 aa13.56□□□□□ -0.24
AP002840.1-201ENST00000546284 ANKRD26Q9UPS8 1709 aa13.56□□□□□ -0.24
AP002840.1-201ENST00000546284 SLIT3O75094 1523 aa13.55□□□□□ -0.24
AP002840.1-201ENST00000546284 CNGB1Q14028 1251 aaPredicted RBP13.55□□□□□ -0.24
AP002840.1-201ENST00000546284 CABLES1Q8TDN4 633 aa13.55□□□□□ -0.24
AP002840.1-201ENST00000546284 COG3Q96JB2 828 aa13.55□□□□□ -0.24
AP002840.1-201ENST00000546284 ABCA3Q99758 1704 aa13.55□□□□□ -0.24
AP002840.1-201ENST00000546284 PHRF1Q9P1Y6 1649 aaKnown RBP13.54□□□□□ -0.24
AP002840.1-201ENST00000546284 SOX12O15370 315 aa13.52□□□□□ -0.25
AP002840.1-201ENST00000546284 MORC1Q86VD1 984 aa13.52□□□□□ -0.25
AP002840.1-201ENST00000546284 NFAT5O94916 1531 aa13.52□□□□□ -0.25
AP002840.1-201ENST00000546284 GCP02774 474 aa13.51□□□□□ -0.25
AP002840.1-201ENST00000546284 TNNT2P45379 298 aaPredicted RBP13.51□□□□□ -0.25
AP002840.1-201ENST00000546284 PARD3Q8TEW0 1356 aa13.5□□□□□ -0.25
AP002840.1-201ENST00000546284 FBLN1P23142 703 aa13.5□□□□□ -0.25
AP002840.1-201ENST00000546284 SPATA31A6Q5VVP1 1343 aa13.49□□□□□ -0.25
AP002840.1-201ENST00000546284 NUTM2BA6NNL0 878 aaPredicted RBP13.49□□□□□ -0.25
AP002840.1-201ENST00000546284 NUTM2EB1AL46 878 aaPredicted RBP13.49□□□□□ -0.25
AP002840.1-201ENST00000546284 HAP1P54257 671 aaPredicted RBP13.49□□□□□ -0.25
AP002840.1-201ENST00000546284 NUTM2AQ8IVF1 878 aaPredicted RBP13.49□□□□□ -0.25
AP002840.1-201ENST00000546284 KCNH5Q8NCM2 988 aa13.49□□□□□ -0.25
AP002840.1-201ENST00000546284 LRP6O75581 1613 aa13.49□□□□□ -0.25
AP002840.1-201ENST00000546284 ZC3H6P61129 1189 aaKnown RBP13.48□□□□□ -0.25
AP002840.1-201ENST00000546284 DIEXFQ68CQ4 756 aaKnown RBP13.48□□□□□ -0.25
AP002840.1-201ENST00000546284 AATKQ6ZMQ8 1374 aa13.47□□□□□ -0.25
AP002840.1-201ENST00000546284 KIAA0232Q92628 1395 aa13.47□□□□□ -0.25
AP002840.1-201ENST00000546284 RRS1Q15050 365 aaKnown RBP13.47□□□□□ -0.25
AP002840.1-201ENST00000546284 PRKRIP1Q9H875 184 aaPredicted RBP13.47□□□□□ -0.25
AP002840.1-201ENST00000546284 CPDO75976 1380 aa13.46□□□□□ -0.25
AP002840.1-201ENST00000546284 MAP3K19Q56UN5 1328 aa13.46□□□□□ -0.25
AP002840.1-201ENST00000546284 LTN1O94822 1766 aa13.46□□□□□ -0.25
AP002840.1-201ENST00000546284 ADAMTS2O95450 1211 aa13.46□□□□□ -0.25
AP002840.1-201ENST00000546284 RALBP1Q15311 655 aa13.46□□□□□ -0.25
AP002840.1-201ENST00000546284 ARHGEF25Q86VW2 580 aa13.46□□□□□ -0.25
AP002840.1-201ENST00000546284 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
AP002840.1-201ENST00000546284 EMILIN1Q9Y6C2 1016 aa13.45□□□□□ -0.26
AP002840.1-201ENST00000546284 SMG6Q86US8 1419 aaKnown RBP13.45□□□□□ -0.26
AP002840.1-201ENST00000546284 PEAK1Q9H792 1746 aa13.44□□□□□ -0.26
AP002840.1-201ENST00000546284 MAP2P11137 1827 aaKnown RBP13.44□□□□□ -0.26
AP002840.1-201ENST00000546284 ANP32CO43423 234 aa13.44□□□□□ -0.26
AP002840.1-201ENST00000546284 PPP2R1AP30153 589 aa13.44□□□□□ -0.26
AP002840.1-201ENST00000546284 CHRNA2Q15822 529 aa13.44□□□□□ -0.26
AP002840.1-201ENST00000546284 PRDM11Q9NQV5 511 aa13.44□□□□□ -0.26
AP002840.1-201ENST00000546284 POLKQ9UBT6 870 aa13.44□□□□□ -0.26
AP002840.1-201ENST00000546284 FAM83GA6ND36 823 aa13.43□□□□□ -0.26
AP002840.1-201ENST00000546284 COL18A1P39060 1754 aa13.43□□□□□ -0.26
AP002840.1-201ENST00000546284 MYBBP1AQ9BQG0 1328 aaKnown RBP13.42□□□□□ -0.26
AP002840.1-201ENST00000546284 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
AP002840.1-201ENST00000546284 LMO7Q8WWI1 1683 aa13.42□□□□□ -0.26
AP002840.1-201ENST00000546284 ABCC6O95255 1503 aa13.42□□□□□ -0.26
AP002840.1-201ENST00000546284 COL14A1Q05707 1796 aaKnown RBP13.42□□□□□ -0.26
AP002840.1-201ENST00000546284 RTL1A6NKG5 1358 aa13.42□□□□□ -0.26
AP002840.1-201ENST00000546284 PLCH1Q4KWH8 1693 aa13.41□□□□□ -0.26
AP002840.1-201ENST00000546284 HOXC9P31274 260 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms