RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 LRP5O75197 1615 aa18.5■□□□□ 0.55
COPS7A-221ENST00000546229 POLR3AO14802 1390 aaPredicted RBP18.5■□□□□ 0.55
COPS7A-221ENST00000546229 KDM2AQ9Y2K7 1162 aa18.49■□□□□ 0.55
COPS7A-221ENST00000546229 GPRASP1Q5JY77 1395 aa18.49■□□□□ 0.55
COPS7A-221ENST00000546229 LMO7Q8WWI1 1683 aa18.48■□□□□ 0.55
COPS7A-221ENST00000546229 DEFB132Q7Z7B7 95 aa18.48■□□□□ 0.55
COPS7A-221ENST00000546229 ZRANB1Q9UGI0 708 aa18.48■□□□□ 0.55
COPS7A-221ENST00000546229 RGPD1P0DJD0 1748 aa18.48■□□□□ 0.55
COPS7A-221ENST00000546229 HAP1P54257 671 aaPredicted RBP18.47■□□□□ 0.55
COPS7A-221ENST00000546229 LMOD2Q6P5Q4 547 aa18.47■□□□□ 0.55
COPS7A-221ENST00000546229 PLEKHG5O94827 1062 aa18.46■□□□□ 0.55
COPS7A-221ENST00000546229 KRT27Q7Z3Y8 459 aa18.46■□□□□ 0.55
COPS7A-221ENST00000546229 BTG4Q9NY30 223 aa18.46■□□□□ 0.55
COPS7A-221ENST00000546229 SPATA31A5Q5VU36 1347 aa18.46■□□□□ 0.55
COPS7A-221ENST00000546229 SPATA31A7Q8IWB4 1347 aa18.46■□□□□ 0.55
COPS7A-221ENST00000546229 DISP2A7MBM2 1401 aa18.44■□□□□ 0.54
COPS7A-221ENST00000546229 NUDT16Q96DE0 195 aaKnown RBP18.44■□□□□ 0.54
COPS7A-221ENST00000546229 FAM98CQ17RN3 349 aaKnown RBP18.43■□□□□ 0.54
COPS7A-221ENST00000546229 KIAA0232Q92628 1395 aa18.42■□□□□ 0.54
COPS7A-221ENST00000546229 QRICH2Q9H0J4 1663 aa18.42■□□□□ 0.54
COPS7A-221ENST00000546229 NGDNQ8NEJ9 315 aaKnown RBP18.4■□□□□ 0.54
COPS7A-221ENST00000546229 CCDC9Q9Y3X0 531 aaKnown RBP18.4■□□□□ 0.54
COPS7A-221ENST00000546229 USP19O94966 1318 aa18.4■□□□□ 0.54
COPS7A-221ENST00000546229 CAMTA1Q9Y6Y1 1673 aa18.4■□□□□ 0.54
COPS7A-221ENST00000546229 PLEKHG3A1L390 1219 aa18.39■□□□□ 0.53
COPS7A-221ENST00000546229 NBPF1Q3BBV0 1214 aa18.39■□□□□ 0.53
COPS7A-221ENST00000546229 CDK19Q9BWU1 502 aa18.39■□□□□ 0.53
COPS7A-221ENST00000546229 SPATA31A1Q5TZJ5 1347 aa18.39■□□□□ 0.53
COPS7A-221ENST00000546229 ACEP12821 1306 aa18.38■□□□□ 0.53
COPS7A-221ENST00000546229 CPDO75976 1380 aa18.38■□□□□ 0.53
COPS7A-221ENST00000546229 RREB1Q92766 1687 aa18.38■□□□□ 0.53
COPS7A-221ENST00000546229 PRDM11Q9NQV5 511 aa18.37■□□□□ 0.53
COPS7A-221ENST00000546229 SSH2Q76I76 1423 aa18.37■□□□□ 0.53
COPS7A-221ENST00000546229 TRPM1Q7Z4N2 1603 aa18.37■□□□□ 0.53
COPS7A-221ENST00000546229 SLIT3O75094 1523 aa18.36■□□□□ 0.53
COPS7A-221ENST00000546229 PARP4Q9UKK3 1724 aaKnown RBP18.35■□□□□ 0.53
COPS7A-221ENST00000546229 PIK3C2AO00443 1686 aa18.35■□□□□ 0.53
COPS7A-221ENST00000546229 PAK3O75914 559 aaPredicted RBP18.35■□□□□ 0.53
COPS7A-221ENST00000546229 CHRNA2Q15822 529 aa18.35■□□□□ 0.53
COPS7A-221ENST00000546229 NBPF8Q3BBV2 869 aa18.35■□□□□ 0.53
COPS7A-221ENST00000546229 FAM182BQ5T319 152 aa18.35■□□□□ 0.53
COPS7A-221ENST00000546229 CCDC61Q9Y6R9 512 aa18.35■□□□□ 0.53
COPS7A-221ENST00000546229 PPIP5K1Q6PFW1 1433 aa18.33■□□□□ 0.53
COPS7A-221ENST00000546229 COL18A1P39060 1754 aa18.33■□□□□ 0.53
COPS7A-221ENST00000546229 NUP188Q5SRE5 1749 aa18.33■□□□□ 0.52
COPS7A-221ENST00000546229 PEAK1Q9H792 1746 aa18.33■□□□□ 0.52
COPS7A-221ENST00000546229 COL5A2P05997 1499 aaPredicted RBP18.33■□□□□ 0.52
COPS7A-221ENST00000546229 SF3B2Q13435 895 aaKnown RBP18.32■□□□□ 0.52
COPS7A-221ENST00000546229 WNK3Q9BYP7 1800 aa18.32■□□□□ 0.52
COPS7A-221ENST00000546229 BAG6P46379 1132 aa18.31■□□□□ 0.52
COPS7A-221ENST00000546229 NUTM2GQ5VZR2 741 aa18.31■□□□□ 0.52
COPS7A-221ENST00000546229 USP6P35125 1406 aa18.31■□□□□ 0.52
COPS7A-221ENST00000546229 CENPJQ9HC77 1338 aaPredicted RBP18.3■□□□□ 0.52
COPS7A-221ENST00000546229 A0A0G2JS52 829 aa18.3■□□□□ 0.52
COPS7A-221ENST00000546229 ZC3H6P61129 1189 aaKnown RBP18.3■□□□□ 0.52
COPS7A-221ENST00000546229 MYT1Q01538 1121 aa18.3■□□□□ 0.52
COPS7A-221ENST00000546229 LRRC37A3O60309 1634 aa18.3■□□□□ 0.52
COPS7A-221ENST00000546229 AKAP12Q02952 1782 aa18.3■□□□□ 0.52
COPS7A-221ENST00000546229 BRD4O60885 1362 aaPredicted RBP18.3■□□□□ 0.52
COPS7A-221ENST00000546229 EN1Q05925 392 aaPredicted RBP18.29■□□□□ 0.52
COPS7A-221ENST00000546229 BARGINQ6ZT62 677 aa18.29■□□□□ 0.52
COPS7A-221ENST00000546229 PSDA5PKW4 1024 aaPredicted RBP18.27■□□□□ 0.52
COPS7A-221ENST00000546229 LARP1Q6PKG0 1096 aaKnown RBP18.26■□□□□ 0.51
COPS7A-221ENST00000546229 CAMKK2Q96RR4 588 aa18.26■□□□□ 0.51
COPS7A-221ENST00000546229 STRN4Q9NRL3 753 aa18.26■□□□□ 0.51
COPS7A-221ENST00000546229 RGPD3A6NKT7 1758 aaPredicted RBP18.26■□□□□ 0.51
COPS7A-221ENST00000546229 RGPD4Q7Z3J3 1758 aa18.26■□□□□ 0.51
COPS7A-221ENST00000546229 ABTB2Q8N961 1025 aa18.25■□□□□ 0.51
COPS7A-221ENST00000546229 CABP2Q9NPB3 220 aa18.25■□□□□ 0.51
COPS7A-221ENST00000546229 USP54Q70EL1 1684 aa18.25■□□□□ 0.51
COPS7A-221ENST00000546229 SBF2Q86WG5 1849 aa18.24■□□□□ 0.51
COPS7A-221ENST00000546229 GCP02774 474 aa18.24■□□□□ 0.51
COPS7A-221ENST00000546229 EZH2Q15910 746 aaKnown RBP18.24■□□□□ 0.51
COPS7A-221ENST00000546229 L3MBTL2Q969R5 705 aa18.24■□□□□ 0.51
COPS7A-221ENST00000546229 PARD3Q8TEW0 1356 aa18.24■□□□□ 0.51
COPS7A-221ENST00000546229 NFAT5O94916 1531 aa18.23■□□□□ 0.51
COPS7A-221ENST00000546229 MON2Q7Z3U7 1717 aa18.23■□□□□ 0.51
COPS7A-221ENST00000546229 AATKQ6ZMQ8 1374 aa18.22■□□□□ 0.51
COPS7A-221ENST00000546229 SRPK2P78362 688 aaKnown RBP18.22■□□□□ 0.51
COPS7A-221ENST00000546229 FAM196AQ6ZSG2 479 aa18.22■□□□□ 0.51
COPS7A-221ENST00000546229 CRB1P82279 1406 aa18.22■□□□□ 0.51
COPS7A-221ENST00000546229 TRIM37O94972 964 aa18.21■□□□□ 0.51
COPS7A-221ENST00000546229 NLRP13Q86W25 1043 aa18.2■□□□□ 0.5
COPS7A-221ENST00000546229 TCP11L2Q8N4U5 519 aa18.2■□□□□ 0.5
COPS7A-221ENST00000546229 CPSF1Q10570 1443 aaKnown RBP18.2■□□□□ 0.5
COPS7A-221ENST00000546229 RGPD5Q99666 1765 aa18.19■□□□□ 0.5
COPS7A-221ENST00000546229 R3HDM1Q15032 1099 aaKnown RBP18.19■□□□□ 0.5
COPS7A-221ENST00000546229 CABP1Q9NZU7 370 aa18.19■□□□□ 0.5
COPS7A-221ENST00000546229 USP35Q9P2H5 1018 aa18.19■□□□□ 0.5
COPS7A-221ENST00000546229 THRAP3Q9Y2W1 955 aaKnown RBP18.19■□□□□ 0.5
COPS7A-221ENST00000546229 ABCC6O95255 1503 aa18.18■□□□□ 0.5
COPS7A-221ENST00000546229 CD163L1Q9NR16 1453 aa18.17■□□□□ 0.5
COPS7A-221ENST00000546229 SBNO2Q9Y2G9 1366 aa18.17■□□□□ 0.5
COPS7A-221ENST00000546229 SIN3AQ96ST3 1273 aa18.16■□□□□ 0.5
COPS7A-221ENST00000546229 OVOS2A0A0G2JMS6 1433 aa18.15■□□□□ 0.5
COPS7A-221ENST00000546229 OVOS2A0A0J9YW53 1432 aa18.15■□□□□ 0.5
COPS7A-221ENST00000546229 OVOS2Q6IE36 1432 aa18.15■□□□□ 0.5
COPS7A-221ENST00000546229 CASZ1Q86V15 1759 aa18.15■□□□□ 0.5
COPS7A-221ENST00000546229 BCL9O00512 1426 aa18.15■□□□□ 0.5
COPS7A-221ENST00000546229 EVA1CP58658 441 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms