RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 C1orf115Q9H7X2 142 aa6.11□□□□□ -1.43
CUL3-215ENST00000546102 PLEKHG3A1L390 1219 aa6.1□□□□□ -1.43
CUL3-215ENST00000546102 HRCP23327 699 aa6.1□□□□□ -1.43
CUL3-215ENST00000546102 ARID3CA6NKF2 412 aa6.09□□□□□ -1.43
CUL3-215ENST00000546102 FAM117AQ9C073 453 aa6.09□□□□□ -1.43
CUL3-215ENST00000546102 NXF1Q9UBU9 619 aaKnown RBP6.09□□□□□ -1.43
CUL3-215ENST00000546102 TTLL12Q14166 644 aaPredicted RBP6.08□□□□□ -1.44
CUL3-215ENST00000546102 PTPRNQ16849 979 aa6.08□□□□□ -1.44
CUL3-215ENST00000546102 IRF7Q92985 503 aa6.08□□□□□ -1.44
CUL3-215ENST00000546102 BMP1P13497 986 aa6.07□□□□□ -1.44
CUL3-215ENST00000546102 SSTR3P32745 418 aaPredicted RBP6.07□□□□□ -1.44
CUL3-215ENST00000546102 SH3BP2P78314 561 aa6.07□□□□□ -1.44
CUL3-215ENST00000546102 PTCRAQ6ISU1 281 aaPredicted RBP6.07□□□□□ -1.44
CUL3-215ENST00000546102 NPM2Q86SE8 214 aaKnown RBP6.07□□□□□ -1.44
CUL3-215ENST00000546102 NPAS3Q8IXF0 933 aa6.07□□□□□ -1.44
CUL3-215ENST00000546102 UNC93B1Q9H1C4 597 aa6.07□□□□□ -1.44
CUL3-215ENST00000546102 SPDYE5A6NIY4 337 aa6.06□□□□□ -1.44
CUL3-215ENST00000546102 APBB1O00213 710 aa6.06□□□□□ -1.44
CUL3-215ENST00000546102 SIAH2O43255 324 aa6.06□□□□□ -1.44
CUL3-215ENST00000546102 VARSP26640 1264 aaKnown RBP6.06□□□□□ -1.44
CUL3-215ENST00000546102 MTMR2Q13614 643 aa6.06□□□□□ -1.44
CUL3-215ENST00000546102 SCARF1Q14162 830 aa6.06□□□□□ -1.44
CUL3-215ENST00000546102 LINC01559Q495D7 138 aa6.06□□□□□ -1.44
CUL3-215ENST00000546102 DCAF1Q9Y4B6 1507 aa6.05□□□□□ -1.44
CUL3-215ENST00000546102 KCNH2Q12809 1159 aa6.05□□□□□ -1.44
CUL3-215ENST00000546102 DIXDC1Q155Q3 683 aa6.05□□□□□ -1.44
CUL3-215ENST00000546102 PRR7Q8TB68 274 aa6.05□□□□□ -1.44
CUL3-215ENST00000546102 BAP1Q92560 729 aa6.05□□□□□ -1.44
CUL3-215ENST00000546102 EVA1BQ9NVM1 165 aa6.05□□□□□ -1.44
CUL3-215ENST00000546102 CTHP32929 405 aa6.04□□□□□ -1.44
CUL3-215ENST00000546102 SPIRE2Q8WWL2 714 aa6.04□□□□□ -1.44
CUL3-215ENST00000546102 DDRGK1Q96HY6 314 aa6.04□□□□□ -1.44
CUL3-215ENST00000546102 PCDHGC3Q9UN70 934 aa6.04□□□□□ -1.44
CUL3-215ENST00000546102 NDUFV2P19404 249 aa6.03□□□□□ -1.44
CUL3-215ENST00000546102 FLIIQ13045 1269 aa6.03□□□□□ -1.44
CUL3-215ENST00000546102 NNTQ13423 1086 aa6.03□□□□□ -1.44
CUL3-215ENST00000546102 DESI1Q6ICB0 168 aa6.03□□□□□ -1.44
CUL3-215ENST00000546102 TRIM46Q7Z4K8 759 aa6.03□□□□□ -1.44
CUL3-215ENST00000546102 ZNF511Q8NB15 262 aa6.03□□□□□ -1.44
CUL3-215ENST00000546102 ZSCAN1Q8NBB4 408 aa6.03□□□□□ -1.44
CUL3-215ENST00000546102 FAM174AQ8TBP5 190 aa6.03□□□□□ -1.44
CUL3-215ENST00000546102 TLL2Q9Y6L7 1015 aa6.03□□□□□ -1.44
CUL3-215ENST00000546102 MOXD2PA6NHM9 499 aa6.02□□□□□ -1.45
CUL3-215ENST00000546102 ADH1CP00326 375 aa6.02□□□□□ -1.45
CUL3-215ENST00000546102 MPNDQ8N594 471 aa6.02□□□□□ -1.45
CUL3-215ENST00000546102 ZFP42Q96MM3 310 aa6.02□□□□□ -1.45
CUL3-215ENST00000546102 PDIA4P13667 645 aaKnown RBP6.01□□□□□ -1.45
CUL3-215ENST00000546102 GMPRP36959 345 aa6.01□□□□□ -1.45
CUL3-215ENST00000546102 WDR4P57081 412 aaKnown RBP6.01□□□□□ -1.45
CUL3-215ENST00000546102 AGERQ15109 404 aa6.01□□□□□ -1.45
CUL3-215ENST00000546102 MRPL14Q6P1L8 145 aaKnown RBP6.01□□□□□ -1.45
CUL3-215ENST00000546102 H3BM21 787 aa6□□□□□ -1.45
CUL3-215ENST00000546102 UPP2O95045 317 aa6□□□□□ -1.45
CUL3-215ENST00000546102 VEGFBP49765 207 aa6□□□□□ -1.45
CUL3-215ENST00000546102 ARID5BQ14865 1188 aa6□□□□□ -1.45
CUL3-215ENST00000546102 GIGYF2Q6Y7W6 1299 aaKnown RBP6□□□□□ -1.45
CUL3-215ENST00000546102 PARP9Q8IXQ6 854 aa6□□□□□ -1.45
CUL3-215ENST00000546102 BEGAINQ9BUH8 593 aa6□□□□□ -1.45
CUL3-215ENST00000546102 GJA5P36382 358 aa5.99□□□□□ -1.45
CUL3-215ENST00000546102 AMHR2Q16671 573 aa5.99□□□□□ -1.45
CUL3-215ENST00000546102 LCE2CQ5TA81 110 aa5.99□□□□□ -1.45
CUL3-215ENST00000546102 PURBQ96QR8 312 aaKnown RBP5.99□□□□□ -1.45
CUL3-215ENST00000546102 ZBTB3Q9H5J0 574 aa5.99□□□□□ -1.45
CUL3-215ENST00000546102 MYO15BQ96JP2 1530 aa5.99□□□□□ -1.45
CUL3-215ENST00000546102 ZBTB7CA1YPR0 619 aa5.98□□□□□ -1.45
CUL3-215ENST00000546102 CCDC82Q8N4S0 544 aa5.98□□□□□ -1.45
CUL3-215ENST00000546102 CLUAP1Q96AJ1 413 aa5.98□□□□□ -1.45
CUL3-215ENST00000546102 ABCC9O60706 1549 aa5.98□□□□□ -1.45
CUL3-215ENST00000546102 MAN1A2O60476 641 aa5.97□□□□□ -1.45
CUL3-215ENST00000546102 TIMP2P16035 220 aa5.97□□□□□ -1.45
CUL3-215ENST00000546102 LYPD8Q6UX82 237 aa5.97□□□□□ -1.45
CUL3-215ENST00000546102 TSC1Q92574 1164 aa5.97□□□□□ -1.45
CUL3-215ENST00000546102 TBC1D2Q9BYX2 928 aa5.97□□□□□ -1.45
CUL3-215ENST00000546102 TRAK2O60296 914 aa5.96□□□□□ -1.46
CUL3-215ENST00000546102 ZIC2O95409 532 aaPredicted RBP5.96□□□□□ -1.46
CUL3-215ENST00000546102 NR5A1Q13285 461 aa5.96□□□□□ -1.46
CUL3-215ENST00000546102 RSBN1LQ6PCB5 846 aaPredicted RBP5.96□□□□□ -1.46
CUL3-215ENST00000546102 BPHLQ86WA6 291 aaPredicted RBP5.96□□□□□ -1.46
CUL3-215ENST00000546102 ARMC2Q8NEN0 867 aa5.96□□□□□ -1.46
CUL3-215ENST00000546102 A6NJR5 290 aa5.95□□□□□ -1.46
CUL3-215ENST00000546102 PRPF38BQ5VTL8 546 aaKnown RBP5.95□□□□□ -1.46
CUL3-215ENST00000546102 CCDC9Q9Y3X0 531 aaKnown RBP5.95□□□□□ -1.46
CUL3-215ENST00000546102 NACADO15069 1562 aa5.94□□□□□ -1.46
CUL3-215ENST00000546102 NUTM2BA6NNL0 878 aaPredicted RBP5.94□□□□□ -1.46
CUL3-215ENST00000546102 NUTM2EB1AL46 878 aaPredicted RBP5.94□□□□□ -1.46
CUL3-215ENST00000546102 SPTLC1O15269 473 aa5.94□□□□□ -1.46
CUL3-215ENST00000546102 BMP2P12643 396 aa5.94□□□□□ -1.46
CUL3-215ENST00000546102 CSPP1Q1MSJ5 1256 aa5.94□□□□□ -1.46
CUL3-215ENST00000546102 C6orf118Q5T5N4 469 aa5.94□□□□□ -1.46
CUL3-215ENST00000546102 NUTM2DQ5VT03 806 aaPredicted RBP5.94□□□□□ -1.46
CUL3-215ENST00000546102 RIC3Q7Z5B4 369 aa5.94□□□□□ -1.46
CUL3-215ENST00000546102 NUTM2AQ8IVF1 878 aaPredicted RBP5.94□□□□□ -1.46
CUL3-215ENST00000546102 PCMTD1Q96MG8 357 aaPredicted RBP5.94□□□□□ -1.46
CUL3-215ENST00000546102 CDK15Q96Q40 435 aa5.94□□□□□ -1.46
CUL3-215ENST00000546102 GOPCQ9HD26 462 aa5.94□□□□□ -1.46
CUL3-215ENST00000546102 MAP10Q9P2G4 905 aa5.94□□□□□ -1.46
CUL3-215ENST00000546102 ERBB4Q15303 1308 aa5.94□□□□□ -1.46
CUL3-215ENST00000546102 NBPF14Q5TI25 921 aa5.93□□□□□ -1.46
CUL3-215ENST00000546102 FOXJ1Q92949 421 aa5.93□□□□□ -1.46
CUL3-215ENST00000546102 SOBPA7XYQ1 873 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms