RNA–Protein interactions for RNA: ENST00000545948.5

ERC1-218, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 1 (best)

Gene ERC1, Length 2,881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-218ENST00000545948 C22orf23Q9BZE7 217 aa12.11□□□□□ -0.47
ERC1-218ENST00000545948 SLC12A5Q9H2X9 1139 aa12.11□□□□□ -0.47
ERC1-218ENST00000545948 NOS1P29475 1434 aa12.11□□□□□ -0.47
ERC1-218ENST00000545948 HDAC1Q13547 482 aaPredicted RBP12.11□□□□□ -0.47
ERC1-218ENST00000545948 TNNT2P45379 298 aaPredicted RBP12.1□□□□□ -0.47
ERC1-218ENST00000545948 C14orf93Q9H972 538 aaKnown RBP12.1□□□□□ -0.47
ERC1-218ENST00000545948 ADGRB1O14514 1584 aa12.09□□□□□ -0.47
ERC1-218ENST00000545948 SETD1BQ9UPS6 1966 aaKnown RBP12.09□□□□□ -0.47
ERC1-218ENST00000545948 RRAGDQ9NQL2 400 aaPredicted RBP12.08□□□□□ -0.47
ERC1-218ENST00000545948 DDX19BQ9UMR2 479 aa12.08□□□□□ -0.47
ERC1-218ENST00000545948 TRAK1Q9UPV9 953 aa12.08□□□□□ -0.47
ERC1-218ENST00000545948 XRCC6P12956 609 aaKnown RBP eCLIP12.08□□□□□ -0.48
ERC1-218ENST00000545948 ISY1Q9ULR0 285 aaKnown RBP12.08□□□□□ -0.48
ERC1-218ENST00000545948 PPLO60437 1756 aa12.08□□□□□ -0.48
ERC1-218ENST00000545948 ANKRD36BQ8N2N9 1353 aa12.08□□□□□ -0.48
ERC1-218ENST00000545948 C3P01024 1663 aa12.08□□□□□ -0.48
ERC1-218ENST00000545948 RPGRIP1LQ68CZ1 1315 aa12.07□□□□□ -0.48
ERC1-218ENST00000545948 U2AF1L5P0DN76 240 aaPredicted RBP12.07□□□□□ -0.48
ERC1-218ENST00000545948 U2AF1Q01081 240 aaKnown RBP eCLIP12.07□□□□□ -0.48
ERC1-218ENST00000545948 DDX11L8A8MPP1 907 aa12.07□□□□□ -0.48
ERC1-218ENST00000545948 TRAK2O60296 914 aa12.06□□□□□ -0.48
ERC1-218ENST00000545948 MRE11P49959 708 aa12.06□□□□□ -0.48
ERC1-218ENST00000545948 MFAP1P55081 439 aaKnown RBP12.06□□□□□ -0.48
ERC1-218ENST00000545948 HSCBQ8IWL3 235 aa12.06□□□□□ -0.48
ERC1-218ENST00000545948 SMC5Q8IY18 1101 aa12.06□□□□□ -0.48
ERC1-218ENST00000545948 SMC4Q9NTJ3 1288 aa12.06□□□□□ -0.48
ERC1-218ENST00000545948 IL16Q14005 1332 aa12.06□□□□□ -0.48
ERC1-218ENST00000545948 EVC2Q86UK5 1308 aa12.06□□□□□ -0.48
ERC1-218ENST00000545948 ATF7IPQ6VMQ6 1270 aa12.05□□□□□ -0.48
ERC1-218ENST00000545948 ABCC11Q96J66 1382 aa12.05□□□□□ -0.48
ERC1-218ENST00000545948 TRIM27P14373 513 aa12.05□□□□□ -0.48
ERC1-218ENST00000545948 NCOA3Q9Y6Q9 1424 aa12.05□□□□□ -0.48
ERC1-218ENST00000545948 AGLP35573 1532 aa12.05□□□□□ -0.48
ERC1-218ENST00000545948 CLCN1P35523 988 aa12.04□□□□□ -0.48
ERC1-218ENST00000545948 SPRYD3Q8NCJ5 442 aa12.04□□□□□ -0.48
ERC1-218ENST00000545948 SNX21Q969T3 373 aa12.04□□□□□ -0.48
ERC1-218ENST00000545948 RBM25P49756 843 aaKnown RBP12.04□□□□□ -0.48
ERC1-218ENST00000545948 EXOSC9Q06265 439 aaKnown RBP12.04□□□□□ -0.48
ERC1-218ENST00000545948 ITPRIPQ8IWB1 547 aa12.04□□□□□ -0.48
ERC1-218ENST00000545948 KIDINS220Q9ULH0 1771 aa12.03□□□□□ -0.48
ERC1-218ENST00000545948 CHGAP10645 457 aaKnown RBP12.03□□□□□ -0.48
ERC1-218ENST00000545948 ZNF142P52746 1687 aaPredicted RBP12.03□□□□□ -0.48
ERC1-218ENST00000545948 IPO8O15397 1037 aaKnown RBP12.03□□□□□ -0.48
ERC1-218ENST00000545948 SSH1Q8WYL5 1049 aa12.03□□□□□ -0.48
ERC1-218ENST00000545948 TSR2Q969E8 191 aaKnown RBP12.03□□□□□ -0.48
ERC1-218ENST00000545948 PLEKHF1Q96S99 279 aa12.03□□□□□ -0.48
ERC1-218ENST00000545948 ZNF692Q9BU19 519 aaPredicted RBP12.03□□□□□ -0.48
ERC1-218ENST00000545948 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
ERC1-218ENST00000545948 KIF16BQ96L93 1317 aa12.03□□□□□ -0.48
ERC1-218ENST00000545948 DDIT3P35638 169 aa12.02□□□□□ -0.48
ERC1-218ENST00000545948 TMPOP42166 694 aaKnown RBP12.02□□□□□ -0.48
ERC1-218ENST00000545948 TULP4Q9NRJ4 1543 aa12.02□□□□□ -0.49
ERC1-218ENST00000545948 PTMSP20962 102 aa12.02□□□□□ -0.49
ERC1-218ENST00000545948 GZF1Q9H116 711 aaPredicted RBP12.02□□□□□ -0.49
ERC1-218ENST00000545948 ZBTB40Q9NUA8 1239 aa12.02□□□□□ -0.49
ERC1-218ENST00000545948 DIP2CQ9Y2E4 1556 aa12.01□□□□□ -0.49
ERC1-218ENST00000545948 NPATQ14207 1427 aa12.01□□□□□ -0.49
ERC1-218ENST00000545948 NUCB1Q02818 461 aa12.01□□□□□ -0.49
ERC1-218ENST00000545948 TMEM132EQ6IEE7 984 aa12.01□□□□□ -0.49
ERC1-218ENST00000545948 PNNQ9H307 717 aaKnown RBP12.01□□□□□ -0.49
ERC1-218ENST00000545948 TRIM35Q9UPQ4 493 aa12.01□□□□□ -0.49
ERC1-218ENST00000545948 ARHGEF28Q8N1W1 1705 aaKnown RBP12.01□□□□□ -0.49
ERC1-218ENST00000545948 NOB1Q9ULX3 412 aaKnown RBP12.01□□□□□ -0.49
ERC1-218ENST00000545948 ALDH1L2Q3SY69 923 aa12□□□□□ -0.49
ERC1-218ENST00000545948 PANK2Q9BZ23 570 aa12□□□□□ -0.49
ERC1-218ENST00000545948 COL3A1P02461 1466 aaPredicted RBP12□□□□□ -0.49
ERC1-218ENST00000545948 TMEM57Q8N5G2 664 aa12□□□□□ -0.49
ERC1-218ENST00000545948 GRPEL1Q9HAV7 217 aa12□□□□□ -0.49
ERC1-218ENST00000545948 SKOR2Q2VWA4 1001 aaPredicted RBP11.99□□□□□ -0.49
ERC1-218ENST00000545948 GBP4Q96PP9 640 aa11.99□□□□□ -0.49
ERC1-218ENST00000545948 MED14O60244 1454 aa11.99□□□□□ -0.49
ERC1-218ENST00000545948 ZNF428Q96B54 188 aa11.99□□□□□ -0.49
ERC1-218ENST00000545948 ARXQ96QS3 562 aa11.99□□□□□ -0.49
ERC1-218ENST00000545948 CHMP4BQ9H444 224 aaKnown RBP11.99□□□□□ -0.49
ERC1-218ENST00000545948 MED1Q15648 1581 aaPredicted RBP11.98□□□□□ -0.49
ERC1-218ENST00000545948 U2SURPO15042 1029 aaKnown RBP11.98□□□□□ -0.49
ERC1-218ENST00000545948 VGFO15240 615 aaPredicted RBP11.98□□□□□ -0.49
ERC1-218ENST00000545948 BMP2KLQ5H9B9 411 aa11.98□□□□□ -0.49
ERC1-218ENST00000545948 BRPF1P55201 1214 aaPredicted RBP11.98□□□□□ -0.49
ERC1-218ENST00000545948 CHD1LQ86WJ1 897 aa11.97□□□□□ -0.49
ERC1-218ENST00000545948 ANKRD26Q9UPS8 1709 aa11.97□□□□□ -0.49
ERC1-218ENST00000545948 A0A1W2PP64 1363 aa11.97□□□□□ -0.49
ERC1-218ENST00000545948 RAB3GAP1Q15042 981 aa11.97□□□□□ -0.49
ERC1-218ENST00000545948 HSP90AB1P08238 724 aaKnown RBP11.96□□□□□ -0.49
ERC1-218ENST00000545948 RIPK4P57078 832 aa11.96□□□□□ -0.49
ERC1-218ENST00000545948 TNPO1Q92973 898 aaKnown RBP11.96□□□□□ -0.5
ERC1-218ENST00000545948 GCC1Q96CN9 775 aa11.96□□□□□ -0.5
ERC1-218ENST00000545948 CABP2Q9NPB3 220 aa11.96□□□□□ -0.5
ERC1-218ENST00000545948 MLH3Q9UHC1 1453 aa11.95□□□□□ -0.5
ERC1-218ENST00000545948 PIK3C2BO00750 1634 aa11.95□□□□□ -0.5
ERC1-218ENST00000545948 NAP1L5Q96NT1 182 aaPredicted RBP11.95□□□□□ -0.5
ERC1-218ENST00000545948 ATAD2Q6PL18 1390 aa11.95□□□□□ -0.5
ERC1-218ENST00000545948 CAMSAP1Q5T5Y3 1602 aa11.95□□□□□ -0.5
ERC1-218ENST00000545948 LNPKQ9C0E8 428 aa11.95□□□□□ -0.5
ERC1-218ENST00000545948 NEXMIFQ5QGS0 1516 aa11.95□□□□□ -0.5
ERC1-218ENST00000545948 PPIP5K1Q6PFW1 1433 aa11.94□□□□□ -0.5
ERC1-218ENST00000545948 TERF2IPQ9NYB0 399 aa11.94□□□□□ -0.5
ERC1-218ENST00000545948 ABCC3O15438 1527 aa11.94□□□□□ -0.5
ERC1-218ENST00000545948 PNPLA6Q8IY17 1366 aa11.94□□□□□ -0.5
ERC1-218ENST00000545948 ESPNB1AK53 854 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms