RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SLC34A2O95436 690 aa8.53□□□□□ -1.04
SNHG1-225ENST00000545920 RTL5Q5HYW3 569 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-225ENST00000545920 HOMEZQ8IX15 550 aa8.53□□□□□ -1.04
SNHG1-225ENST00000545920 DDRGK1Q96HY6 314 aa8.53□□□□□ -1.04
SNHG1-225ENST00000545920 TRPM1Q7Z4N2 1603 aa8.53□□□□□ -1.04
SNHG1-225ENST00000545920 IQGAP3Q86VI3 1631 aa8.52□□□□□ -1.05
SNHG1-225ENST00000545920 C2orf72A6NCS6 295 aa8.52□□□□□ -1.05
SNHG1-225ENST00000545920 TRIM66O15016 1216 aa8.52□□□□□ -1.05
SNHG1-225ENST00000545920 PER1O15534 1290 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-225ENST00000545920 NUDT7P0C024 238 aa8.52□□□□□ -1.05
SNHG1-225ENST00000545920 ZNF777Q9ULD5 760 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-225ENST00000545920 DUOX2Q9NRD8 1548 aa8.52□□□□□ -1.05
SNHG1-225ENST00000545920 NEURL4Q96JN8 1562 aa8.52□□□□□ -1.05
SNHG1-225ENST00000545920 DPYSL4O14531 572 aa8.51□□□□□ -1.05
SNHG1-225ENST00000545920 PPM1GO15355 546 aaPredicted RBP8.51□□□□□ -1.05
SNHG1-225ENST00000545920 TMF1P82094 1093 aa8.51□□□□□ -1.05
SNHG1-225ENST00000545920 DSG2Q14126 1118 aa8.51□□□□□ -1.05
SNHG1-225ENST00000545920 DCAF11Q8TEB1 546 aa8.51□□□□□ -1.05
SNHG1-225ENST00000545920 EIF3AQ14152 1382 aaKnown RBP8.5□□□□□ -1.05
SNHG1-225ENST00000545920 ARID3CA6NKF2 412 aa8.5□□□□□ -1.05
SNHG1-225ENST00000545920 GPR37O15354 613 aa8.5□□□□□ -1.05
SNHG1-225ENST00000545920 FOXK1P85037 733 aa8.5□□□□□ -1.05
SNHG1-225ENST00000545920 ZNF326Q5BKZ1 582 aaKnown RBP8.5□□□□□ -1.05
SNHG1-225ENST00000545920 POTEEQ6S8J3 1075 aa8.5□□□□□ -1.05
SNHG1-225ENST00000545920 KRI1Q8N9T8 703 aaKnown RBP8.5□□□□□ -1.05
SNHG1-225ENST00000545920 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.5□□□□□ -1.05
SNHG1-225ENST00000545920 SCAPERQ9BY12 1400 aa8.5□□□□□ -1.05
SNHG1-225ENST00000545920 GPBP1L1Q9HC44 474 aaPredicted RBP8.5□□□□□ -1.05
SNHG1-225ENST00000545920 LHX6Q9UPM6 363 aa8.5□□□□□ -1.05
SNHG1-225ENST00000545920 PCDHGA4Q9Y5G9 962 aa8.5□□□□□ -1.05
SNHG1-225ENST00000545920 CLASP1Q7Z460 1538 aa8.49□□□□□ -1.05
SNHG1-225ENST00000545920 SAMD9LQ8IVG5 1584 aa8.49□□□□□ -1.05
SNHG1-225ENST00000545920 RTEL1-TNFRSF6BF6WH68 1400 aa8.49□□□□□ -1.05
SNHG1-225ENST00000545920 DEKP35659 375 aaKnown RBP8.49□□□□□ -1.05
SNHG1-225ENST00000545920 KDM4CQ9H3R0 1056 aa8.49□□□□□ -1.05
SNHG1-225ENST00000545920 PLA2G2EQ9NZK7 142 aa8.49□□□□□ -1.05
SNHG1-225ENST00000545920 HCSTQ9UBK5 93 aa8.49□□□□□ -1.05
SNHG1-225ENST00000545920 A2MP01023 1474 aa8.49□□□□□ -1.05
SNHG1-225ENST00000545920 ARAP3Q8WWN8 1544 aa8.49□□□□□ -1.05
SNHG1-225ENST00000545920 PDE4DQ08499 809 aa8.48□□□□□ -1.05
SNHG1-225ENST00000545920 PLA2R1Q13018 1463 aa8.48□□□□□ -1.05
SNHG1-225ENST00000545920 RNF17Q9BXT8 1623 aaKnown RBP8.47□□□□□ -1.05
SNHG1-225ENST00000545920 PIK3C2GO75747 1445 aa8.47□□□□□ -1.05
SNHG1-225ENST00000545920 AAMPQ13685 434 aa8.47□□□□□ -1.05
SNHG1-225ENST00000545920 TESK2Q96S53 571 aa8.47□□□□□ -1.05
SNHG1-225ENST00000545920 POLR3GLQ9BT43 218 aa8.47□□□□□ -1.05
SNHG1-225ENST00000545920 BACH2Q9BYV9 841 aa8.47□□□□□ -1.05
SNHG1-225ENST00000545920 AXIN2Q9Y2T1 843 aa8.47□□□□□ -1.05
SNHG1-225ENST00000545920 NINLQ9Y2I6 1382 aa8.47□□□□□ -1.05
SNHG1-225ENST00000545920 UHRF1BP1LA0JNW5 1464 aa8.45□□□□□ -1.06
SNHG1-225ENST00000545920 WDR7Q9Y4E6 1490 aa8.45□□□□□ -1.06
SNHG1-225ENST00000545920 SYNMO15061 1565 aa8.45□□□□□ -1.06
SNHG1-225ENST00000545920 PSDA5PKW4 1024 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-225ENST00000545920 ARHGAP33O14559 1287 aa8.45□□□□□ -1.06
SNHG1-225ENST00000545920 HNRNPMP52272 730 aaKnown RBP eCLIP8.45□□□□□ -1.06
SNHG1-225ENST00000545920 ADGRD1Q6QNK2 874 aa8.45□□□□□ -1.06
SNHG1-225ENST00000545920 CENPQQ7L2Z9 268 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-225ENST00000545920 IL27Q8NEV9 243 aa8.45□□□□□ -1.06
SNHG1-225ENST00000545920 PTPRTO14522 1441 aa8.45□□□□□ -1.06
SNHG1-225ENST00000545920 ARHGAP5Q13017 1502 aa8.44□□□□□ -1.06
SNHG1-225ENST00000545920 ABCC2Q92887 1545 aa8.44□□□□□ -1.06
SNHG1-225ENST00000545920 SHROOM2Q13796 1616 aa8.44□□□□□ -1.06
SNHG1-225ENST00000545920 CDC42BPBQ9Y5S2 1711 aa8.44□□□□□ -1.06
SNHG1-225ENST00000545920 EXOC6Q8TAG9 804 aa8.44□□□□□ -1.06
SNHG1-225ENST00000545920 TMC2Q8TDI7 906 aa8.44□□□□□ -1.06
SNHG1-225ENST00000545920 MINK1Q8N4C8 1332 aaPredicted RBP8.44□□□□□ -1.06
SNHG1-225ENST00000545920 ZMYM3Q14202 1370 aa8.44□□□□□ -1.06
SNHG1-225ENST00000545920 PLCH2O75038 1416 aa8.44□□□□□ -1.06
SNHG1-225ENST00000545920 SCAF11Q99590 1463 aaKnown RBP8.44□□□□□ -1.06
SNHG1-225ENST00000545920 SYCP2Q9BX26 1530 aa8.44□□□□□ -1.06
SNHG1-225ENST00000545920 EFCAB2Q5VUJ9 269 aa8.43□□□□□ -1.06
SNHG1-225ENST00000545920 KNSTRNQ9Y448 316 aa8.43□□□□□ -1.06
SNHG1-225ENST00000545920 TRPM2O94759 1503 aa8.43□□□□□ -1.06
SNHG1-225ENST00000545920 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.43□□□□□ -1.06
SNHG1-225ENST00000545920 KIAA1210Q9ULL0 1709 aa8.43□□□□□ -1.06
SNHG1-225ENST00000545920 PLPP6Q8IY26 295 aa8.42□□□□□ -1.06
SNHG1-225ENST00000545920 PANK3Q9H999 370 aa8.42□□□□□ -1.06
SNHG1-225ENST00000545920 MYO5CQ9NQX4 1742 aa8.41□□□□□ -1.06
SNHG1-225ENST00000545920 ASXL1Q8IXJ9 1541 aa8.41□□□□□ -1.06
SNHG1-225ENST00000545920 DISP3Q9P2K9 1392 aa8.41□□□□□ -1.06
SNHG1-225ENST00000545920 SBNO2Q9Y2G9 1366 aa8.41□□□□□ -1.06
SNHG1-225ENST00000545920 ZNF521Q96K83 1311 aa8.41□□□□□ -1.06
SNHG1-225ENST00000545920 TK2O00142 265 aa8.41□□□□□ -1.06
SNHG1-225ENST00000545920 WDR43Q15061 677 aaKnown RBP eCLIP8.41□□□□□ -1.06
SNHG1-225ENST00000545920 KANK1Q14678 1352 aa8.4□□□□□ -1.06
SNHG1-225ENST00000545920 KDM2BQ8NHM5 1336 aa8.4□□□□□ -1.06
SNHG1-225ENST00000545920 KDM4FA0A1W2PPD8 638 aa8.4□□□□□ -1.06
SNHG1-225ENST00000545920 MAP2K5Q13163 448 aa8.4□□□□□ -1.06
SNHG1-225ENST00000545920 IQGAP1P46940 1657 aa8.4□□□□□ -1.07
SNHG1-225ENST00000545920 TTC37Q6PGP7 1564 aa8.39□□□□□ -1.07
SNHG1-225ENST00000545920 ABCC1P33527 1531 aa8.39□□□□□ -1.07
SNHG1-225ENST00000545920 MYOM2P54296 1465 aa8.39□□□□□ -1.07
SNHG1-225ENST00000545920 IRF6O14896 467 aa8.39□□□□□ -1.07
SNHG1-225ENST00000545920 AMHR2Q16671 573 aa8.39□□□□□ -1.07
SNHG1-225ENST00000545920 NBPF1Q3BBV0 1214 aa8.39□□□□□ -1.07
SNHG1-225ENST00000545920 TRMT2AQ8IZ69 625 aaKnown RBP8.39□□□□□ -1.07
SNHG1-225ENST00000545920 ZMYND15Q9H091 742 aa8.39□□□□□ -1.07
SNHG1-225ENST00000545920 MADDQ8WXG6 1647 aa8.39□□□□□ -1.07
SNHG1-225ENST00000545920 E9PSI1 815 aa8.38□□□□□ -1.07
SNHG1-225ENST00000545920 HRO43593 1189 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms