RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 GGNBP2Q9H3C7 697 aa19.55■□□□□ 0.72
CNN3-207ENST00000545882 TRIM35Q9UPQ4 493 aa19.55■□□□□ 0.72
CNN3-207ENST00000545882 STK26Q9P289 416 aa19.54■□□□□ 0.72
CNN3-207ENST00000545882 SPATA31D1Q6ZQQ2 1576 aa19.53■□□□□ 0.72
CNN3-207ENST00000545882 TMPOP42166 694 aaKnown RBP19.53■□□□□ 0.72
CNN3-207ENST00000545882 ZKSCAN2Q63HK3 967 aa19.53■□□□□ 0.72
CNN3-207ENST00000545882 RWDD1Q9H446 243 aaPredicted RBP19.53■□□□□ 0.72
CNN3-207ENST00000545882 KIF20BQ96Q89 1820 aa19.53■□□□□ 0.72
CNN3-207ENST00000545882 MED14O60244 1454 aa19.53■□□□□ 0.72
CNN3-207ENST00000545882 EXOSC9Q06265 439 aaKnown RBP19.53■□□□□ 0.72
CNN3-207ENST00000545882 FYB1O15117 783 aa19.52■□□□□ 0.72
CNN3-207ENST00000545882 CT47B1P0C2W7 299 aaPredicted RBP19.52■□□□□ 0.72
CNN3-207ENST00000545882 SENP3Q9H4L4 574 aaPredicted RBP19.52■□□□□ 0.72
CNN3-207ENST00000545882 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.72
CNN3-207ENST00000545882 ALKQ9UM73 1620 aa19.51■□□□□ 0.71
CNN3-207ENST00000545882 SRPK2P78362 688 aaKnown RBP19.51■□□□□ 0.71
CNN3-207ENST00000545882 FBXO31Q5XUX0 539 aaPredicted RBP19.51■□□□□ 0.71
CNN3-207ENST00000545882 DZIP1LQ8IYY4 767 aaKnown RBP19.51■□□□□ 0.71
CNN3-207ENST00000545882 YTHDC2Q9H6S0 1430 aaKnown RBP19.5■□□□□ 0.71
CNN3-207ENST00000545882 U2SURPO15042 1029 aaKnown RBP19.5■□□□□ 0.71
CNN3-207ENST00000545882 TBC1D32Q96NH3 1257 aa19.49■□□□□ 0.71
CNN3-207ENST00000545882 MINK1Q8N4C8 1332 aaPredicted RBP19.49■□□□□ 0.71
CNN3-207ENST00000545882 ATAD2Q6PL18 1390 aa19.49■□□□□ 0.71
CNN3-207ENST00000545882 ARHGEF40Q8TER5 1519 aa19.49■□□□□ 0.71
CNN3-207ENST00000545882 SSH1Q8WYL5 1049 aa19.49■□□□□ 0.71
CNN3-207ENST00000545882 SETD1AO15047 1707 aaKnown RBP19.48■□□□□ 0.71
CNN3-207ENST00000545882 TRIM27P14373 513 aa19.48■□□□□ 0.71
CNN3-207ENST00000545882 PRAM1Q96QH2 718 aa19.47■□□□□ 0.71
CNN3-207ENST00000545882 SMC4Q9NTJ3 1288 aa19.47■□□□□ 0.71
CNN3-207ENST00000545882 BECN1Q14457 450 aa19.47■□□□□ 0.71
CNN3-207ENST00000545882 BRPF3Q9ULD4 1205 aa19.47■□□□□ 0.71
CNN3-207ENST00000545882 A2ML1A8K2U0 1454 aa19.47■□□□□ 0.71
CNN3-207ENST00000545882 IL16Q14005 1332 aa19.46■□□□□ 0.71
CNN3-207ENST00000545882 PNPLA6Q8IY17 1366 aa19.46■□□□□ 0.71
CNN3-207ENST00000545882 KIF13AQ9H1H9 1805 aa19.46■□□□□ 0.71
CNN3-207ENST00000545882 FTSJ3Q8IY81 847 aaKnown RBP19.46■□□□□ 0.71
CNN3-207ENST00000545882 ANTXR1Q9H6X2 564 aa19.45■□□□□ 0.7
CNN3-207ENST00000545882 TERF2IPQ9NYB0 399 aa19.45■□□□□ 0.7
CNN3-207ENST00000545882 CDC42BPGQ6DT37 1551 aa19.45■□□□□ 0.7
CNN3-207ENST00000545882 DLC1Q96QB1 1528 aa19.44■□□□□ 0.7
CNN3-207ENST00000545882 HDAC1Q13547 482 aaPredicted RBP19.44■□□□□ 0.7
CNN3-207ENST00000545882 RTN4Q9NQC3 1192 aaKnown RBP19.44■□□□□ 0.7
CNN3-207ENST00000545882 MAP2P11137 1827 aaKnown RBP19.43■□□□□ 0.7
CNN3-207ENST00000545882 ATF7IPQ6VMQ6 1270 aa19.43■□□□□ 0.7
CNN3-207ENST00000545882 RIPK4P57078 832 aa19.43■□□□□ 0.7
CNN3-207ENST00000545882 NOB1Q9ULX3 412 aaKnown RBP19.43■□□□□ 0.7
CNN3-207ENST00000545882 LRRC7Q96NW7 1537 aa19.43■□□□□ 0.7
CNN3-207ENST00000545882 DIAPH1O60610 1272 aaKnown RBP19.42■□□□□ 0.7
CNN3-207ENST00000545882 TBC1D2Q9BYX2 928 aa19.42■□□□□ 0.7
CNN3-207ENST00000545882 POGKQ9P215 609 aa19.42■□□□□ 0.7
CNN3-207ENST00000545882 DDX19BQ9UMR2 479 aa19.42■□□□□ 0.7
CNN3-207ENST00000545882 CDK19Q9BWU1 502 aa19.41■□□□□ 0.7
CNN3-207ENST00000545882 SLKQ9H2G2 1235 aaPredicted RBP19.41■□□□□ 0.7
CNN3-207ENST00000545882 UPF2Q9HAU5 1272 aaKnown RBP19.41■□□□□ 0.7
CNN3-207ENST00000545882 ITPRIPQ8IWB1 547 aa19.4■□□□□ 0.7
CNN3-207ENST00000545882 TMEM57Q8N5G2 664 aa19.4■□□□□ 0.7
CNN3-207ENST00000545882 NRXN3Q9Y4C0 1643 aa19.4■□□□□ 0.7
CNN3-207ENST00000545882 SMC5Q8IY18 1101 aa19.39■□□□□ 0.7
CNN3-207ENST00000545882 CABP1Q9NZU7 370 aa19.39■□□□□ 0.7
CNN3-207ENST00000545882 ZBTB40Q9NUA8 1239 aa19.39■□□□□ 0.69
CNN3-207ENST00000545882 HDGFL2Q7Z4V5 671 aaPredicted RBP19.38■□□□□ 0.69
CNN3-207ENST00000545882 FAM135BQ49AJ0 1406 aa19.38■□□□□ 0.69
CNN3-207ENST00000545882 RIMS2Q9UQ26 1411 aa19.38■□□□□ 0.69
CNN3-207ENST00000545882 FBLN1P23142 703 aa19.36■□□□□ 0.69
CNN3-207ENST00000545882 RSPH6AQ9H0K4 717 aa19.36■□□□□ 0.69
CNN3-207ENST00000545882 FCHSD2O94868 740 aa19.35■□□□□ 0.69
CNN3-207ENST00000545882 ALDH1L2Q3SY69 923 aa19.35■□□□□ 0.69
CNN3-207ENST00000545882 PNNQ9H307 717 aaKnown RBP19.35■□□□□ 0.69
CNN3-207ENST00000545882 POLKQ9UBT6 870 aa19.35■□□□□ 0.69
CNN3-207ENST00000545882 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
CNN3-207ENST00000545882 DLG5Q8TDM6 1919 aa19.35■□□□□ 0.69
CNN3-207ENST00000545882 KIF16BQ96L93 1317 aa19.34■□□□□ 0.69
CNN3-207ENST00000545882 C22orf23Q9BZE7 217 aa19.33■□□□□ 0.69
CNN3-207ENST00000545882 PPIP5K1Q6PFW1 1433 aa19.33■□□□□ 0.69
CNN3-207ENST00000545882 ATP7BP35670 1465 aa19.33■□□□□ 0.68
CNN3-207ENST00000545882 PRKAR2BP31323 418 aa19.33■□□□□ 0.68
CNN3-207ENST00000545882 IPO8O15397 1037 aaKnown RBP19.31■□□□□ 0.68
CNN3-207ENST00000545882 MFAP1P55081 439 aaKnown RBP19.31■□□□□ 0.68
CNN3-207ENST00000545882 BRPF1P55201 1214 aaPredicted RBP19.31■□□□□ 0.68
CNN3-207ENST00000545882 WAPLQ7Z5K2 1190 aa19.31■□□□□ 0.68
CNN3-207ENST00000545882 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.31■□□□□ 0.681e-11■□□□□ 10.4
CNN3-207ENST00000545882 PHACTR3Q96KR7 559 aa19.31■□□□□ 0.68
CNN3-207ENST00000545882 KNDC1Q76NI1 1749 aa19.31■□□□□ 0.68
CNN3-207ENST00000545882 NUCB1Q02818 461 aa19.3■□□□□ 0.68
CNN3-207ENST00000545882 MLECQ14165 292 aa19.28■□□□□ 0.68
CNN3-207ENST00000545882 VAMP4O75379 141 aa19.27■□□□□ 0.68
CNN3-207ENST00000545882 NFE2L2Q16236 605 aa19.27■□□□□ 0.68
CNN3-207ENST00000545882 SPRYD3Q8NCJ5 442 aa19.27■□□□□ 0.68
CNN3-207ENST00000545882 CPSF1Q10570 1443 aaKnown RBP19.27■□□□□ 0.68
CNN3-207ENST00000545882 HMOX1P09601 288 aa19.27■□□□□ 0.67
CNN3-207ENST00000545882 MRPL50Q8N5N7 158 aaKnown RBP19.27■□□□□ 0.67
CNN3-207ENST00000545882 THUMPD2Q9BTF0 503 aaKnown RBP19.27■□□□□ 0.67
CNN3-207ENST00000545882 PIK3R4Q99570 1358 aa19.27■□□□□ 0.67
CNN3-207ENST00000545882 TECPR2O15040 1411 aa19.27■□□□□ 0.67
CNN3-207ENST00000545882 ZBTB7BO15156 539 aaPredicted RBP19.26■□□□□ 0.67
CNN3-207ENST00000545882 ZNF428Q96B54 188 aa19.26■□□□□ 0.67
CNN3-207ENST00000545882 PTCH1Q13635 1447 aa19.26■□□□□ 0.67
CNN3-207ENST00000545882 CPS1P31327 1500 aa19.25■□□□□ 0.67
CNN3-207ENST00000545882 MON2Q7Z3U7 1717 aa19.25■□□□□ 0.67
CNN3-207ENST00000545882 TSPYL6Q8N831 410 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms