RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TNNT3P45378 269 aaPredicted RBP15.1■□□□□ 0.01
COL4A6-209ENST00000545689 NAT10Q9H0A0 1025 aaKnown RBP15.1■□□□□ 0.01
COL4A6-209ENST00000545689 APPP05067 770 aa15.1■□□□□ 0.01
COL4A6-209ENST00000545689 ABCC5O15440 1437 aa15.09■□□□□ 0.01
COL4A6-209ENST00000545689 TRAK2O60296 914 aa15.09■□□□□ 0.01
COL4A6-209ENST00000545689 PDCP20941 246 aa15.09■□□□□ 0.01
COL4A6-209ENST00000545689 ATF7IPQ6VMQ6 1270 aa15.09■□□□□ 0.01
COL4A6-209ENST00000545689 IPO7O95373 1038 aaKnown RBP15.09■□□□□ 0.01
COL4A6-209ENST00000545689 NASPP49321 788 aaPredicted RBP15.09■□□□□ 0.01
COL4A6-209ENST00000545689 CDK19Q9BWU1 502 aa15.09■□□□□ 0.01
COL4A6-209ENST00000545689 NFXL1Q6ZNB6 911 aa15.09■□□□□ 0.01
COL4A6-209ENST00000545689 RALYLQ86SE5 291 aaKnown RBP15.09■□□□□ 0.01
COL4A6-209ENST00000545689 PES1O00541 588 aaKnown RBP15.08■□□□□ 0.01
COL4A6-209ENST00000545689 ATF3P18847 181 aa15.08■□□□□ 0
COL4A6-209ENST00000545689 RTEL1-TNFRSF6BF6WH68 1400 aa15.08■□□□□ 0
COL4A6-209ENST00000545689 THOC2Q8NI27 1593 aaKnown RBP15.08■□□□□ 0
COL4A6-209ENST00000545689 SLC12A5Q9H2X9 1139 aa15.07■□□□□ 0
COL4A6-209ENST00000545689 SRCIN1Q9C0H9 1055 aa15.07■□□□□ 0
COL4A6-209ENST00000545689 BCAR3O75815 825 aa15.07■□□□□ 0
COL4A6-209ENST00000545689 FCHSD2O94868 740 aa15.07■□□□□ 0
COL4A6-209ENST00000545689 SLFN5Q08AF3 891 aa15.07■□□□□ 0
COL4A6-209ENST00000545689 MTERF4Q7Z6M4 381 aaKnown RBP15.06■□□□□ 0
COL4A6-209ENST00000545689 FSD1Q9BTV5 496 aa15.06■□□□□ 0
COL4A6-209ENST00000545689 CIZ1Q9ULV3 898 aaPredicted RBP15.06■□□□□ 0
COL4A6-209ENST00000545689 BICRAQ9NZM4 1560 aa15.06■□□□□ 0
COL4A6-209ENST00000545689 SURF6O75683 361 aaKnown RBP15.06■□□□□ 0
COL4A6-209ENST00000545689 VPS37DQ86XT2 251 aa15.06■□□□□ 0
COL4A6-209ENST00000545689 ABCC11Q96J66 1382 aa15.06■□□□□ 0
COL4A6-209ENST00000545689 NCOA1Q15788 1441 aa15.05■□□□□ 0
COL4A6-209ENST00000545689 CCDC173Q0VFZ6 552 aa15.05■□□□□ -0
COL4A6-209ENST00000545689 VPS53Q5VIR6 699 aa15.05■□□□□ -0
COL4A6-209ENST00000545689 NSD3Q9BZ95 1437 aa15.04■□□□□ -0
COL4A6-209ENST00000545689 DHX8Q14562 1220 aaKnown RBP15.04■□□□□ -0
COL4A6-209ENST00000545689 AEBP1Q8IUX7 1158 aa15.04■□□□□ -0
COL4A6-209ENST00000545689 BRMS1Q9HCU9 246 aa15.04■□□□□ -0
COL4A6-209ENST00000545689 ARHGEF11O15085 1522 aa15.04■□□□□ -0
COL4A6-209ENST00000545689 RPRD2Q5VT52 1461 aaKnown RBP15.04■□□□□ -0
COL4A6-209ENST00000545689 XBP1P17861 261 aa15.04■□□□□ -0
COL4A6-209ENST00000545689 NLRP2Q9NX02 1062 aa15.04■□□□□ -0
COL4A6-209ENST00000545689 FAM135AQ9P2D6 1515 aa15.03■□□□□ -0
COL4A6-209ENST00000545689 ABTB2Q8N961 1025 aa15.03■□□□□ -0
COL4A6-209ENST00000545689 TSR2Q969E8 191 aaKnown RBP15.03■□□□□ -0
COL4A6-209ENST00000545689 MAP7D2Q96T17 732 aa15.03■□□□□ -0
COL4A6-209ENST00000545689 LRRCC1Q9C099 1032 aa15.03■□□□□ -0
COL4A6-209ENST00000545689 TSPY26PQ9H489 355 aa15.03■□□□□ -0
COL4A6-209ENST00000545689 ANKRD1Q15327 319 aa15.03■□□□□ -0
COL4A6-209ENST00000545689 K7ELQ4 463 aaPredicted RBP15.03■□□□□ -0
COL4A6-209ENST00000545689 CHD1LQ86WJ1 897 aa15.03■□□□□ -0
COL4A6-209ENST00000545689 NEUROD6Q96NK8 337 aa15.03■□□□□ -0
COL4A6-209ENST00000545689 CABP1Q9NZU7 370 aa15.03■□□□□ -0
COL4A6-209ENST00000545689 NEK4P51957 841 aa15.03■□□□□ -0
COL4A6-209ENST00000545689 TXNDC2Q86VQ3 553 aa15.03■□□□□ -0
COL4A6-209ENST00000545689 ZNF592Q92610 1267 aa15.03■□□□□ -0
COL4A6-209ENST00000545689 PDIA4P13667 645 aaKnown RBP15.03■□□□□ -0
COL4A6-209ENST00000545689 OLFM4Q6UX06 510 aa15.03■□□□□ -0
COL4A6-209ENST00000545689 HOMER1Q86YM7 354 aa15.03■□□□□ -0
COL4A6-209ENST00000545689 TEX35Q5T0J7 233 aa15.02■□□□□ -0
COL4A6-209ENST00000545689 TRIM34Q9BYJ4 488 aa15.02■□□□□ -0
COL4A6-209ENST00000545689 ARGLU1Q9NWB6 273 aaPredicted RBP15.02■□□□□ -0
COL4A6-209ENST00000545689 DHX16O60231 1041 aaKnown RBP15.02■□□□□ -0
COL4A6-209ENST00000545689 WASHC4Q2M389 1173 aa15.02□□□□□ -0.01
COL4A6-209ENST00000545689 GRIN2AQ12879 1464 aa15.01□□□□□ -0.01
COL4A6-209ENST00000545689 SLC4A2P04920 1241 aa15.01□□□□□ -0.01
COL4A6-209ENST00000545689 AIMP1Q12904 312 aaKnown RBP15.01□□□□□ -0.01
COL4A6-209ENST00000545689 RPAP2Q8IXW5 612 aaPredicted RBP15.01□□□□□ -0.01
COL4A6-209ENST00000545689 CCAR2Q8N163 923 aaKnown RBP15.01□□□□□ -0.01
COL4A6-209ENST00000545689 ZNF396Q96N95 335 aaPredicted RBP15.01□□□□□ -0.01
COL4A6-209ENST00000545689 THEMISQ8N1K5 641 aaPredicted RBP15.01□□□□□ -0.01
COL4A6-209ENST00000545689 TBC1D2BQ9UPU7 963 aa15.01□□□□□ -0.01
COL4A6-209ENST00000545689 NKTRP30414 1462 aaKnown RBP15.01□□□□□ -0.01
COL4A6-209ENST00000545689 SART3Q15020 963 aaKnown RBP15□□□□□ -0.01
COL4A6-209ENST00000545689 NFE2L2Q16236 605 aa15□□□□□ -0.01
COL4A6-209ENST00000545689 PCMTD1Q96MG8 357 aaPredicted RBP15□□□□□ -0.01
COL4A6-209ENST00000545689 CCP110O43303 1012 aa15□□□□□ -0.01
COL4A6-209ENST00000545689 SULT6B1Q6IMI4 303 aa15□□□□□ -0.01
COL4A6-209ENST00000545689 SETQ01105 290 aaPredicted RBP15□□□□□ -0.01
COL4A6-209ENST00000545689 WDR33Q9C0J8 1336 aaKnown RBP15□□□□□ -0.01
COL4A6-209ENST00000545689 HDGFL1Q5TGJ6 251 aa15□□□□□ -0.01
COL4A6-209ENST00000545689 IFT57Q9NWB7 429 aa15□□□□□ -0.01
COL4A6-209ENST00000545689 NSD2O96028 1365 aa15□□□□□ -0.01
COL4A6-209ENST00000545689 ALDH1L2Q3SY69 923 aa14.99□□□□□ -0.01
COL4A6-209ENST00000545689 CCDC184Q52MB2 194 aa14.99□□□□□ -0.01
COL4A6-209ENST00000545689 ACBD3Q9H3P7 528 aa14.99□□□□□ -0.01
COL4A6-209ENST00000545689 CAVIN1Q6NZI2 390 aaKnown RBP14.99□□□□□ -0.01
COL4A6-209ENST00000545689 CYP46A1Q9Y6A2 500 aa14.98□□□□□ -0.01
COL4A6-209ENST00000545689 TATP17735 454 aaPredicted RBP14.98□□□□□ -0.01
COL4A6-209ENST00000545689 KIF6Q6ZMV9 814 aa14.98□□□□□ -0.01
COL4A6-209ENST00000545689 C1orf115Q9H7X2 142 aa14.98□□□□□ -0.01
COL4A6-209ENST00000545689 POGZQ7Z3K3 1410 aa14.97□□□□□ -0.01
COL4A6-209ENST00000545689 SCAF11Q99590 1463 aaKnown RBP14.97□□□□□ -0.01
COL4A6-209ENST00000545689 TMPOP42166 694 aaKnown RBP14.97□□□□□ -0.01
COL4A6-209ENST00000545689 KINO60870 393 aaKnown RBP14.97□□□□□ -0.01
COL4A6-209ENST00000545689 PRPF40AO75400 957 aaKnown RBP14.97□□□□□ -0.01
COL4A6-209ENST00000545689 MNS1Q8NEH6 495 aa14.97□□□□□ -0.01
COL4A6-209ENST00000545689 ZSCAN31Q96LW9 406 aaPredicted RBP14.97□□□□□ -0.01
COL4A6-209ENST00000545689 SDF4Q9BRK5 362 aa14.97□□□□□ -0.01
COL4A6-209ENST00000545689 NUTM2GQ5VZR2 741 aa14.96□□□□□ -0.01
COL4A6-209ENST00000545689 FAM13BQ9NYF5 915 aa14.96□□□□□ -0.02
COL4A6-209ENST00000545689 HMGN5P82970 282 aaKnown RBP14.95□□□□□ -0.02
COL4A6-209ENST00000545689 SYTL4Q96C24 671 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms