RNA–Protein interactions for RNA: ENST00000545419.5

RNF10-223, Transcript of ring finger protein 10, human

TSL 5

Gene RNF10, Length 1,336 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF10-223	ENST00000545419	SETD1A	O15047	1707 aa	Known RBP	11.36	□□□□□ -0.59
RNF10-223	ENST00000545419	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.36	□□□□□ -0.59
RNF10-223	ENST00000545419	NKX1-1	Q15270	411 aa	Predicted RBP	11.35	□□□□□ -0.59
RNF10-223	ENST00000545419	BRINP3	Q76B58	766 aa		11.35	□□□□□ -0.59
RNF10-223	ENST00000545419	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.34	□□□□□ -0.59
RNF10-223	ENST00000545419	ADGRL3	Q9HAR2	1447 aa		11.34	□□□□□ -0.59
RNF10-223	ENST00000545419	NBPF1	Q3BBV0	1214 aa		11.33	□□□□□ -0.6
RNF10-223	ENST00000545419	MS4A3	Q96HJ5	214 aa		11.33	□□□□□ -0.6
RNF10-223	ENST00000545419	PRAM1	Q96QH2	718 aa		11.33	□□□□□ -0.6
RNF10-223	ENST00000545419	PCGF6	Q9BYE7	350 aa		11.33	□□□□□ -0.6
RNF10-223	ENST00000545419	POGK	Q9P215	609 aa		11.33	□□□□□ -0.6
RNF10-223	ENST00000545419	TRAK1	Q9UPV9	953 aa		11.33	□□□□□ -0.6
RNF10-223	ENST00000545419	ORAI2	Q96SN7	254 aa		11.32	□□□□□ -0.6
RNF10-223	ENST00000545419	MST1R	Q04912	1400 aa		11.31	□□□□□ -0.6
RNF10-223	ENST00000545419	GTPBP6	O43824	516 aa	Predicted RBP	11.31	□□□□□ -0.6
RNF10-223	ENST00000545419	GOLGA2	Q08379	1002 aa		11.31	□□□□□ -0.6
RNF10-223	ENST00000545419	POTEH	Q6S545	545 aa		11.31	□□□□□ -0.6
RNF10-223	ENST00000545419	LRRC59	Q96AG4	307 aa	Known RBP	11.31	□□□□□ -0.6
RNF10-223	ENST00000545419	PLEKHH1	Q9ULM0	1364 aa		11.31	□□□□□ -0.6
RNF10-223	ENST00000545419	VSIG10	Q8N0Z9	540 aa		11.3	□□□□□ -0.6
RNF10-223	ENST00000545419	CABP2	Q9NPB3	220 aa		11.3	□□□□□ -0.6
RNF10-223	ENST00000545419	C1orf167	Q5SNV9	1468 aa		11.3	□□□□□ -0.6
RNF10-223	ENST00000545419	ASXL1	Q8IXJ9	1541 aa		11.3	□□□□□ -0.6
RNF10-223	ENST00000545419	ADGRB1	O14514	1584 aa		11.3	□□□□□ -0.6
RNF10-223	ENST00000545419	ESCO1	Q5FWF5	840 aa		11.29	□□□□□ -0.6
RNF10-223	ENST00000545419	TMEM106C	Q9BVX2	250 aa		11.29	□□□□□ -0.6
RNF10-223	ENST00000545419	ROBO1	Q9Y6N7	1651 aa		11.28	□□□□□ -0.6
RNF10-223	ENST00000545419	TIMELESS	Q9UNS1	1208 aa		11.28	□□□□□ -0.6
RNF10-223	ENST00000545419	LAMC1	P11047	1609 aa		11.27	□□□□□ -0.6
RNF10-223	ENST00000545419	DLC1	Q96QB1	1528 aa		11.27	□□□□□ -0.61
RNF10-223	ENST00000545419	SOS2	Q07890	1332 aa	Predicted RBP	11.27	□□□□□ -0.61
RNF10-223	ENST00000545419	CLSPN	Q9HAW4	1339 aa		11.27	□□□□□ -0.61
RNF10-223	ENST00000545419	WASL	O00401	505 aa	Predicted RBP	11.27	□□□□□ -0.61
RNF10-223	ENST00000545419	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
RNF10-223	ENST00000545419	JCAD	Q9P266	1359 aa		11.26	□□□□□ -0.61
RNF10-223	ENST00000545419	FOXO3	O43524	673 aa		11.26	□□□□□ -0.61
RNF10-223	ENST00000545419	EVX2	Q03828	476 aa		11.26	□□□□□ -0.61
RNF10-223	ENST00000545419	NBPF8	Q3BBV2	869 aa		11.26	□□□□□ -0.61
RNF10-223	ENST00000545419	NUTM2F	A1L443	756 aa		11.25	□□□□□ -0.61
RNF10-223	ENST00000545419	SOX12	O15370	315 aa		11.25	□□□□□ -0.61
RNF10-223	ENST00000545419	TIE1	P35590	1138 aa		11.25	□□□□□ -0.61
RNF10-223	ENST00000545419	EFCAB3	Q8N7B9	438 aa		11.25	□□□□□ -0.61
RNF10-223	ENST00000545419	DDX17	Q92841	729 aa	Known RBP	11.25	□□□□□ -0.61
RNF10-223	ENST00000545419	SPATA31A6	Q5VVP1	1343 aa		11.24	□□□□□ -0.61
RNF10-223	ENST00000545419	TSHZ2	Q9NRE2	1034 aa		11.24	□□□□□ -0.61
RNF10-223	ENST00000545419	KNDC1	Q76NI1	1749 aa		11.24	□□□□□ -0.61
RNF10-223	ENST00000545419	NPHP3	Q7Z494	1330 aa		11.23	□□□□□ -0.61
RNF10-223	ENST00000545419	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.23	□□□□□ -0.61
RNF10-223	ENST00000545419	NALCN	Q8IZF0	1738 aa		11.23	□□□□□ -0.61
RNF10-223	ENST00000545419	KIAA1210	Q9ULL0	1709 aa		11.23	□□□□□ -0.61
RNF10-223	ENST00000545419	NLRP6	P59044	892 aa		11.23	□□□□□ -0.61
RNF10-223	ENST00000545419	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.23	□□□□□ -0.61
RNF10-223	ENST00000545419	CDK19	Q9BWU1	502 aa		11.23	□□□□□ -0.61
RNF10-223	ENST00000545419	PHF8	Q9UPP1	1060 aa		11.23	□□□□□ -0.61
RNF10-223	ENST00000545419	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.23	□□□□□ -0.61
RNF10-223	ENST00000545419	GALR2	O43603	387 aa	Predicted RBP	11.22	□□□□□ -0.61
RNF10-223	ENST00000545419	MKRN3	Q13064	507 aa	Known RBP	11.22	□□□□□ -0.61
RNF10-223	ENST00000545419	KRT28	Q7Z3Y7	464 aa		11.22	□□□□□ -0.61
RNF10-223	ENST00000545419	CDC42BPG	Q6DT37	1551 aa		11.22	□□□□□ -0.61
RNF10-223	ENST00000545419	TONSL	Q96HA7	1378 aa		11.22	□□□□□ -0.61
RNF10-223	ENST00000545419	PSME1	Q06323	249 aa		11.21	□□□□□ -0.61
RNF10-223	ENST00000545419	NUDT16	Q96DE0	195 aa	Known RBP	11.21	□□□□□ -0.61
RNF10-223	ENST00000545419	RGS17	Q9UGC6	210 aa	Predicted RBP	11.21	□□□□□ -0.61
RNF10-223	ENST00000545419	TRPC6	Q9Y210	931 aa		11.21	□□□□□ -0.61
RNF10-223	ENST00000545419	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.2	□□□□□ -0.62
RNF10-223	ENST00000545419	PHLPP1	O60346	1717 aa		11.2	□□□□□ -0.62
RNF10-223	ENST00000545419	MFRP	Q9BY79	579 aa		11.2	□□□□□ -0.62
RNF10-223	ENST00000545419	COL16A1	Q07092	1604 aa	Predicted RBP	11.2	□□□□□ -0.62
RNF10-223	ENST00000545419	ANKAR	Q7Z5J8	1434 aa		11.19	□□□□□ -0.62
RNF10-223	ENST00000545419	PLEKHG3	A1L390	1219 aa		11.19	□□□□□ -0.62
RNF10-223	ENST00000545419	GPRASP1	Q5JY77	1395 aa		11.19	□□□□□ -0.62
RNF10-223	ENST00000545419	PRR36	Q9H6K5	1346 aa		11.19	□□□□□ -0.62
RNF10-223	ENST00000545419	TTLL13P	A6NNM8	815 aa		11.18	□□□□□ -0.62
RNF10-223	ENST00000545419	PMFBP1	Q8TBY8	1022 aa		11.18	□□□□□ -0.62
RNF10-223	ENST00000545419	EIF3A	Q14152	1382 aa	Known RBP	11.18	□□□□□ -0.62
RNF10-223	ENST00000545419	SPATA31A3	Q5VYP0	1347 aa		11.18	□□□□□ -0.62
RNF10-223	ENST00000545419	CARD11	Q9BXL7	1154 aa		11.17	□□□□□ -0.62
RNF10-223	ENST00000545419	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.17	□□□□□ -0.62
RNF10-223	ENST00000545419	ROCK2	O75116	1388 aa	Known RBP	11.17	□□□□□ -0.62
RNF10-223	ENST00000545419	PNPLA6	Q8IY17	1366 aa		11.16	□□□□□ -0.62
RNF10-223	ENST00000545419	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.16	□□□□□ -0.62
RNF10-223	ENST00000545419	NUTM2E	B1AL46	878 aa	Predicted RBP	11.16	□□□□□ -0.62
RNF10-223	ENST00000545419	XPC	Q01831	940 aa	Predicted RBP	11.16	□□□□□ -0.62
RNF10-223	ENST00000545419	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.16	□□□□□ -0.62
RNF10-223	ENST00000545419	CCER1	Q8TC90	406 aa	Predicted RBP	11.16	□□□□□ -0.62
RNF10-223	ENST00000545419	FMN2	Q9NZ56	1722 aa		11.16	□□□□□ -0.62
RNF10-223	ENST00000545419	NHSL1	Q5SYE7	1610 aa		11.16	□□□□□ -0.62
RNF10-223	ENST00000545419	MED1	Q15648	1581 aa	Predicted RBP	11.15	□□□□□ -0.62
RNF10-223	ENST00000545419	PXDN	Q92626	1479 aa		11.15	□□□□□ -0.62
RNF10-223	ENST00000545419	SBNO1	A3KN83	1393 aa		11.15	□□□□□ -0.62
RNF10-223	ENST00000545419	IFFO2	Q5TF58	517 aa		11.15	□□□□□ -0.62
RNF10-223	ENST00000545419	NGDN	Q8NEJ9	315 aa	Known RBP	11.15	□□□□□ -0.62
RNF10-223	ENST00000545419	PUS7	Q96PZ0	661 aa	Known RBP	11.15	□□□□□ -0.62
RNF10-223	ENST00000545419	EVC2	Q86UK5	1308 aa		11.15	□□□□□ -0.62
RNF10-223	ENST00000545419	ADGRB2	O60241	1585 aa		11.15	□□□□□ -0.62
RNF10-223	ENST00000545419	SRPK2	P78362	688 aa	Known RBP	11.14	□□□□□ -0.63
RNF10-223	ENST00000545419	TRPM1	Q7Z4N2	1603 aa		11.14	□□□□□ -0.63
RNF10-223	ENST00000545419	GABBR2	O75899	941 aa		11.13	□□□□□ -0.63
RNF10-223	ENST00000545419	MEX3C	Q5U5Q3	659 aa	Known RBP	11.13	□□□□□ -0.63
RNF10-223	ENST00000545419	ZNF772	Q68DY9	489 aa	Predicted RBP	11.13	□□□□□ -0.63

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