RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 PIK3C2GO75747 1445 aa10.78□□□□□ -0.68
CCDC7-210ENST00000545067 ABCC2Q92887 1545 aa10.78□□□□□ -0.68
CCDC7-210ENST00000545067 PTMAP06454 111 aaKnown RBP10.77□□□□□ -0.68
CCDC7-210ENST00000545067 FKBP5Q13451 457 aaPredicted RBP10.77□□□□□ -0.68
CCDC7-210ENST00000545067 TSPYL6Q8N831 410 aa10.77□□□□□ -0.68
CCDC7-210ENST00000545067 PHACTR3Q96KR7 559 aa10.77□□□□□ -0.68
CCDC7-210ENST00000545067 TSPYL4Q9UJ04 414 aa10.77□□□□□ -0.68
CCDC7-210ENST00000545067 FCHSD2O94868 740 aa10.77□□□□□ -0.69
CCDC7-210ENST00000545067 ZNF521Q96K83 1311 aa10.77□□□□□ -0.69
CCDC7-210ENST00000545067 SMARCA5O60264 1052 aaPredicted RBP10.76□□□□□ -0.69
CCDC7-210ENST00000545067 POLR3AO14802 1390 aaPredicted RBP10.76□□□□□ -0.69
CCDC7-210ENST00000545067 ATP10AO60312 1499 aa10.76□□□□□ -0.69
CCDC7-210ENST00000545067 A0A0G2JS52 829 aa10.76□□□□□ -0.69
CCDC7-210ENST00000545067 SLC4A2P04920 1241 aa10.76□□□□□ -0.69
CCDC7-210ENST00000545067 KCNJ4P48050 445 aa10.76□□□□□ -0.69
CCDC7-210ENST00000545067 HAP1P54257 671 aaPredicted RBP10.76□□□□□ -0.69
CCDC7-210ENST00000545067 KRT24Q2M2I5 525 aa10.76□□□□□ -0.69
CCDC7-210ENST00000545067 NUDT16Q96DE0 195 aaKnown RBP10.76□□□□□ -0.69
CCDC7-210ENST00000545067 RTEL1-TNFRSF6BF6WH68 1400 aa10.76□□□□□ -0.69
CCDC7-210ENST00000545067 NFE2L2Q16236 605 aa10.76□□□□□ -0.69
CCDC7-210ENST00000545067 RBM33Q96EV2 1170 aaKnown RBP10.75□□□□□ -0.69
CCDC7-210ENST00000545067 ARID3AQ99856 593 aa10.75□□□□□ -0.69
CCDC7-210ENST00000545067 MAST1Q9Y2H9 1570 aa10.75□□□□□ -0.69
CCDC7-210ENST00000545067 HMMRO75330 724 aa10.75□□□□□ -0.69
CCDC7-210ENST00000545067 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCDC7-210ENST00000545067 MCM4P33991 863 aa10.75□□□□□ -0.69
CCDC7-210ENST00000545067 AAMPQ13685 434 aa10.75□□□□□ -0.69
CCDC7-210ENST00000545067 TBC1D32Q96NH3 1257 aa10.75□□□□□ -0.69
CCDC7-210ENST00000545067 ARHGEF5Q12774 1597 aa10.75□□□□□ -0.69
CCDC7-210ENST00000545067 EID1Q9Y6B2 187 aa10.74□□□□□ -0.69
CCDC7-210ENST00000545067 ATAD2Q6PL18 1390 aa10.74□□□□□ -0.69
CCDC7-210ENST00000545067 NLRP6P59044 892 aa10.74□□□□□ -0.69
CCDC7-210ENST00000545067 A0A1W2PP64 1363 aa10.74□□□□□ -0.69
CCDC7-210ENST00000545067 F6X3S4 739 aa10.74□□□□□ -0.69
CCDC7-210ENST00000545067 RBM42Q9BTD8 480 aaKnown RBP10.74□□□□□ -0.69
CCDC7-210ENST00000545067 EIF2AK4Q9P2K8 1649 aaKnown RBP10.74□□□□□ -0.69
CCDC7-210ENST00000545067 DDX11L8A8MPP1 907 aa10.74□□□□□ -0.69
CCDC7-210ENST00000545067 AEBP1Q8IUX7 1158 aa10.74□□□□□ -0.69
CCDC7-210ENST00000545067 NINLQ9Y2I6 1382 aa10.73□□□□□ -0.69
CCDC7-210ENST00000545067 MCTP1Q6DN14 999 aa10.73□□□□□ -0.69
CCDC7-210ENST00000545067 ANO2Q9NQ90 1003 aa10.73□□□□□ -0.69
CCDC7-210ENST00000545067 MBIPQ9NS73 344 aa10.73□□□□□ -0.69
CCDC7-210ENST00000545067 POLKQ9UBT6 870 aa10.73□□□□□ -0.69
CCDC7-210ENST00000545067 CCDC9Q9Y3X0 531 aaKnown RBP10.73□□□□□ -0.69
CCDC7-210ENST00000545067 CCDC61Q9Y6R9 512 aa10.73□□□□□ -0.69
CCDC7-210ENST00000545067 TRIM35Q9UPQ4 493 aa10.73□□□□□ -0.69
CCDC7-210ENST00000545067 PTPRTO14522 1441 aa10.72□□□□□ -0.69
CCDC7-210ENST00000545067 ANKRD36BQ8N2N9 1353 aa10.72□□□□□ -0.69
CCDC7-210ENST00000545067 CDC45O75419 566 aa10.72□□□□□ -0.69
CCDC7-210ENST00000545067 CEBPAP49715 358 aaPredicted RBP10.72□□□□□ -0.69
CCDC7-210ENST00000545067 C8orf58Q8NAV2 365 aa10.72□□□□□ -0.69
CCDC7-210ENST00000545067 ST18O60284 1047 aa10.72□□□□□ -0.69
CCDC7-210ENST00000545067 DNTTIP2Q5QJE6 756 aaKnown RBP10.72□□□□□ -0.69
CCDC7-210ENST00000545067 TRMT2AQ8IZ69 625 aaKnown RBP10.72□□□□□ -0.69
CCDC7-210ENST00000545067 MCCP23508 829 aa10.72□□□□□ -0.69
CCDC7-210ENST00000545067 TSHZ3Q63HK5 1081 aa10.72□□□□□ -0.69
CCDC7-210ENST00000545067 EXOC6BQ9Y2D4 811 aa10.72□□□□□ -0.69
CCDC7-210ENST00000545067 CT47B1P0C2W7 299 aaPredicted RBP10.71□□□□□ -0.69
CCDC7-210ENST00000545067 C16orf71Q8IYS4 520 aaPredicted RBP10.71□□□□□ -0.69
CCDC7-210ENST00000545067 NAP1L2Q9ULW6 460 aaPredicted RBP10.71□□□□□ -0.7
CCDC7-210ENST00000545067 ERVK-7P63135 1459 aa10.71□□□□□ -0.7
CCDC7-210ENST00000545067 GCC1Q96CN9 775 aa10.7□□□□□ -0.7
CCDC7-210ENST00000545067 HSP90AB2PQ58FF8 381 aa10.7□□□□□ -0.7
CCDC7-210ENST00000545067 MAP4K4O95819 1239 aaPredicted RBP10.7□□□□□ -0.7
CCDC7-210ENST00000545067 KIAA1211Q6ZU35 1233 aa10.7□□□□□ -0.7
CCDC7-210ENST00000545067 ATP7AQ04656 1500 aa10.7□□□□□ -0.7
CCDC7-210ENST00000545067 WASLO00401 505 aaPredicted RBP10.69□□□□□ -0.7
CCDC7-210ENST00000545067 MSNP26038 577 aaKnown RBP10.69□□□□□ -0.7
CCDC7-210ENST00000545067 PRDM15P57071 1507 aaPredicted RBP10.69□□□□□ -0.7
CCDC7-210ENST00000545067 PANK2Q9BZ23 570 aa10.69□□□□□ -0.7
CCDC7-210ENST00000545067 NPC1L1Q9UHC9 1359 aa10.69□□□□□ -0.7
CCDC7-210ENST00000545067 NEK4P51957 841 aa10.69□□□□□ -0.7
CCDC7-210ENST00000545067 INTS3Q68E01 1043 aaKnown RBP10.69□□□□□ -0.7
CCDC7-210ENST00000545067 PREX2Q70Z35 1606 aa10.69□□□□□ -0.7
CCDC7-210ENST00000545067 CCDC27Q2M243 656 aa10.68□□□□□ -0.7
CCDC7-210ENST00000545067 TBC1D9Q6ZT07 1266 aa10.68□□□□□ -0.7
CCDC7-210ENST00000545067 IL1RAPL2Q9NP60 686 aa10.68□□□□□ -0.7
CCDC7-210ENST00000545067 ZNF330Q9Y3S2 320 aaPredicted RBP10.68□□□□□ -0.7
CCDC7-210ENST00000545067 NPATQ14207 1427 aa10.68□□□□□ -0.7
CCDC7-210ENST00000545067 ZBTB40Q9NUA8 1239 aa10.68□□□□□ -0.7
CCDC7-210ENST00000545067 TRPM1Q7Z4N2 1603 aa10.68□□□□□ -0.7
CCDC7-210ENST00000545067 CAVIN1Q6NZI2 390 aaKnown RBP10.68□□□□□ -0.7
CCDC7-210ENST00000545067 MPNDQ8N594 471 aa10.68□□□□□ -0.7
CCDC7-210ENST00000545067 USHBP1Q8N6Y0 703 aa10.68□□□□□ -0.7
CCDC7-210ENST00000545067 FGD1P98174 961 aa10.68□□□□□ -0.7
CCDC7-210ENST00000545067 ABTB2Q8N961 1025 aa10.68□□□□□ -0.7
CCDC7-210ENST00000545067 RNF214Q8ND24 703 aa10.68□□□□□ -0.7
CCDC7-210ENST00000545067 VAMP4O75379 141 aa10.67□□□□□ -0.7
CCDC7-210ENST00000545067 REC8O95072 547 aa10.67□□□□□ -0.7
CCDC7-210ENST00000545067 ZNF518AQ6AHZ1 1483 aa10.67□□□□□ -0.7
CCDC7-210ENST00000545067 CDC42BPBQ9Y5S2 1711 aa10.67□□□□□ -0.7
CCDC7-210ENST00000545067 MYO5CQ9NQX4 1742 aa10.67□□□□□ -0.7
CCDC7-210ENST00000545067 K7ELQ4 463 aaPredicted RBP10.67□□□□□ -0.7
CCDC7-210ENST00000545067 FOXO3O43524 673 aa10.67□□□□□ -0.7
CCDC7-210ENST00000545067 SSFA2P28290 1259 aa10.67□□□□□ -0.7
CCDC7-210ENST00000545067 XPCQ01831 940 aaPredicted RBP10.67□□□□□ -0.7
CCDC7-210ENST00000545067 TEFQ10587 303 aa10.67□□□□□ -0.7
CCDC7-210ENST00000545067 PRPF40AO75400 957 aaKnown RBP10.66□□□□□ -0.7
CCDC7-210ENST00000545067 NUCB1Q02818 461 aa10.66□□□□□ -0.7
CCDC7-210ENST00000545067 HDAC1Q13547 482 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms