RNA–Protein interactions for RNA: ENST00000544551.5

RDX-218, Transcript of radixin, humanhuman

TSL 2 BASIC

Gene RDX, Length 4,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-218ENST00000544551 GBP4Q96PP9 640 aa18.48■□□□□ 0.55
RDX-218ENST00000544551 ZNF521Q96K83 1311 aa18.47■□□□□ 0.55
RDX-218ENST00000544551 ATP10AO60312 1499 aa18.47■□□□□ 0.55
RDX-218ENST00000544551 PIK3C2GO75747 1445 aa18.47■□□□□ 0.55
RDX-218ENST00000544551 FCHSD2O94868 740 aa18.47■□□□□ 0.55
RDX-218ENST00000544551 TSPYL4Q9UJ04 414 aa18.47■□□□□ 0.55
RDX-218ENST00000544551 FKBP5Q13451 457 aaPredicted RBP18.47■□□□□ 0.55
RDX-218ENST00000544551 SMARCA5O60264 1052 aaPredicted RBP18.46■□□□□ 0.55
RDX-218ENST00000544551 ZMYM4Q5VZL5 1548 aa18.46■□□□□ 0.55
RDX-218ENST00000544551 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
RDX-218ENST00000544551 CEBPAP49715 358 aaPredicted RBP18.46■□□□□ 0.55
RDX-218ENST00000544551 A0A0G2JS52 829 aa18.46■□□□□ 0.55
RDX-218ENST00000544551 API5Q9BZZ5 524 aaKnown RBP18.46■□□□□ 0.55
RDX-218ENST00000544551 POLR3AO14802 1390 aaPredicted RBP18.45■□□□□ 0.54
RDX-218ENST00000544551 RTEL1-TNFRSF6BF6WH68 1400 aa18.45■□□□□ 0.54
RDX-218ENST00000544551 TRAK2O60296 914 aa18.45■□□□□ 0.54
RDX-218ENST00000544551 NFE2L2Q16236 605 aa18.45■□□□□ 0.54
RDX-218ENST00000544551 DDX49Q9Y6V7 483 aaKnown RBP18.44■□□□□ 0.54
RDX-218ENST00000544551 NLRP6P59044 892 aa18.44■□□□□ 0.54
RDX-218ENST00000544551 AEBP1Q8IUX7 1158 aa18.44■□□□□ 0.54
RDX-218ENST00000544551 EID1Q9Y6B2 187 aa18.44■□□□□ 0.54
RDX-218ENST00000544551 ARHGEF5Q12774 1597 aa18.44■□□□□ 0.54
RDX-218ENST00000544551 F6X3S4 739 aa18.43■□□□□ 0.54
RDX-218ENST00000544551 A0A1W2PP64 1363 aa18.43■□□□□ 0.54
RDX-218ENST00000544551 MAST1Q9Y2H9 1570 aa18.43■□□□□ 0.54
RDX-218ENST00000544551 POLKQ9UBT6 870 aa18.42■□□□□ 0.54
RDX-218ENST00000544551 CCDC61Q9Y6R9 512 aa18.42■□□□□ 0.54
RDX-218ENST00000544551 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.42■□□□□ 0.54
RDX-218ENST00000544551 KCNJ4P48050 445 aa18.42■□□□□ 0.54
RDX-218ENST00000544551 RBM42Q9BTD8 480 aaKnown RBP18.42■□□□□ 0.54
RDX-218ENST00000544551 ATAD2Q6PL18 1390 aa18.41■□□□□ 0.54
RDX-218ENST00000544551 TRIM35Q9UPQ4 493 aa18.41■□□□□ 0.54
RDX-218ENST00000544551 C8orf58Q8NAV2 365 aa18.41■□□□□ 0.54
RDX-218ENST00000544551 TBC1D32Q96NH3 1257 aa18.41■□□□□ 0.54
RDX-218ENST00000544551 MBIPQ9NS73 344 aa18.41■□□□□ 0.54
RDX-218ENST00000544551 PTPRTO14522 1441 aa18.4■□□□□ 0.54
RDX-218ENST00000544551 HAP1P54257 671 aaPredicted RBP18.4■□□□□ 0.54
RDX-218ENST00000544551 CCDC9Q9Y3X0 531 aaKnown RBP18.4■□□□□ 0.54
RDX-218ENST00000544551 TRMT2AQ8IZ69 625 aaKnown RBP18.4■□□□□ 0.54
RDX-218ENST00000544551 HMMRO75330 724 aa18.4■□□□□ 0.54
RDX-218ENST00000544551 PTMAP06454 111 aaKnown RBP18.39■□□□□ 0.54
RDX-218ENST00000544551 MCM4P33991 863 aa18.39■□□□□ 0.54
RDX-218ENST00000544551 TSHZ3Q63HK5 1081 aa18.39■□□□□ 0.53
RDX-218ENST00000544551 ANKRD36BQ8N2N9 1353 aa18.39■□□□□ 0.53
RDX-218ENST00000544551 AAMPQ13685 434 aa18.38■□□□□ 0.53
RDX-218ENST00000544551 C16orf71Q8IYS4 520 aaPredicted RBP18.38■□□□□ 0.53
RDX-218ENST00000544551 ARID3AQ99856 593 aa18.38■□□□□ 0.53
RDX-218ENST00000544551 HSP90AB2PQ58FF8 381 aa18.38■□□□□ 0.53
RDX-218ENST00000544551 ANO2Q9NQ90 1003 aa18.38■□□□□ 0.53
RDX-218ENST00000544551 EIF2AK4Q9P2K8 1649 aaKnown RBP18.38■□□□□ 0.53
RDX-218ENST00000544551 ERVK-7P63135 1459 aa18.37■□□□□ 0.53
RDX-218ENST00000544551 EXOC6BQ9Y2D4 811 aa18.37■□□□□ 0.53
RDX-218ENST00000544551 MCTP1Q6DN14 999 aa18.37■□□□□ 0.53
RDX-218ENST00000544551 WASLO00401 505 aaPredicted RBP18.36■□□□□ 0.53
RDX-218ENST00000544551 ATP7AQ04656 1500 aa18.36■□□□□ 0.53
RDX-218ENST00000544551 NPATQ14207 1427 aa18.36■□□□□ 0.53
RDX-218ENST00000544551 NINLQ9Y2I6 1382 aa18.35■□□□□ 0.53
RDX-218ENST00000544551 CDC45O75419 566 aa18.35■□□□□ 0.53
RDX-218ENST00000544551 MAP4K4O95819 1239 aaPredicted RBP18.35■□□□□ 0.53
RDX-218ENST00000544551 CT47B1P0C2W7 299 aaPredicted RBP18.34■□□□□ 0.53
RDX-218ENST00000544551 USHBP1Q8N6Y0 703 aa18.34■□□□□ 0.53
RDX-218ENST00000544551 DDX11L8A8MPP1 907 aa18.34■□□□□ 0.53
RDX-218ENST00000544551 CDC42BPBQ9Y5S2 1711 aa18.33■□□□□ 0.53
RDX-218ENST00000544551 XPCQ01831 940 aaPredicted RBP18.33■□□□□ 0.53
RDX-218ENST00000544551 PREX2Q70Z35 1606 aa18.33■□□□□ 0.53
RDX-218ENST00000544551 PRDM15P57071 1507 aaPredicted RBP18.33■□□□□ 0.52
RDX-218ENST00000544551 FOXO3O43524 673 aa18.33■□□□□ 0.52
RDX-218ENST00000544551 ST18O60284 1047 aa18.33■□□□□ 0.52
RDX-218ENST00000544551 ABTB2Q8N961 1025 aa18.33■□□□□ 0.52
RDX-218ENST00000544551 IL1RAPL2Q9NP60 686 aa18.33■□□□□ 0.52
RDX-218ENST00000544551 NAP1L2Q9ULW6 460 aaPredicted RBP18.33■□□□□ 0.52
RDX-218ENST00000544551 NPC1L1Q9UHC9 1359 aa18.32■□□□□ 0.52
RDX-218ENST00000544551 GCC1Q96CN9 775 aa18.32■□□□□ 0.52
RDX-218ENST00000544551 ZBTB40Q9NUA8 1239 aa18.32■□□□□ 0.52
RDX-218ENST00000544551 ZNF330Q9Y3S2 320 aaPredicted RBP18.32■□□□□ 0.52
RDX-218ENST00000544551 VAMP4O75379 141 aa18.32■□□□□ 0.52
RDX-218ENST00000544551 CCDC27Q2M243 656 aa18.32■□□□□ 0.52
RDX-218ENST00000544551 ZNF518AQ6AHZ1 1483 aa18.32■□□□□ 0.52
RDX-218ENST00000544551 MCCP23508 829 aa18.31■□□□□ 0.52
RDX-218ENST00000544551 TBC1D9Q6ZT07 1266 aa18.31■□□□□ 0.52
RDX-218ENST00000544551 TRPM1Q7Z4N2 1603 aa18.31■□□□□ 0.52
RDX-218ENST00000544551 NEK4P51957 841 aa18.31■□□□□ 0.52
RDX-218ENST00000544551 PANK2Q9BZ23 570 aa18.31■□□□□ 0.52
RDX-218ENST00000544551 KIAA1211Q6ZU35 1233 aa18.3■□□□□ 0.52
RDX-218ENST00000544551 DNTTIP2Q5QJE6 756 aaKnown RBP18.3■□□□□ 0.52
RDX-218ENST00000544551 MYO5CQ9NQX4 1742 aa18.3■□□□□ 0.52
RDX-218ENST00000544551 MPNDQ8N594 471 aa18.3■□□□□ 0.52
RDX-218ENST00000544551 AIMP1Q12904 312 aaKnown RBP18.29■□□□□ 0.52
RDX-218ENST00000544551 INTS3Q68E01 1043 aaKnown RBP18.29■□□□□ 0.52
RDX-218ENST00000544551 TEFQ10587 303 aa18.29■□□□□ 0.52
RDX-218ENST00000544551 MEIS3Q99687 375 aa18.28■□□□□ 0.52
RDX-218ENST00000544551 ADCY10Q96PN6 1610 aa18.28■□□□□ 0.52
RDX-218ENST00000544551 OTUD7AQ8TE49 926 aaPredicted RBP18.28■□□□□ 0.52
RDX-218ENST00000544551 RNF214Q8ND24 703 aa18.27■□□□□ 0.52
RDX-218ENST00000544551 RSPH6AQ9H0K4 717 aa18.27■□□□□ 0.52
RDX-218ENST00000544551 NUCB1Q02818 461 aa18.27■□□□□ 0.52
RDX-218ENST00000544551 HDAC1Q13547 482 aaPredicted RBP18.27■□□□□ 0.52
RDX-218ENST00000544551 ALDH1L2Q3SY69 923 aa18.27■□□□□ 0.52
RDX-218ENST00000544551 CAVIN1Q6NZI2 390 aaKnown RBP18.27■□□□□ 0.52
RDX-218ENST00000544551 CFAP44Q96MT7 982 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms