RNA–Protein interactions for RNA: ENST00000544257.5

RIMKLB-212, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 1 (best)

Gene RIMKLB, Length 1,589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-212ENST00000544257 BRINP3Q76B58 766 aa13.79□□□□□ -0.2
RIMKLB-212ENST00000544257 EIF3AQ14152 1382 aaKnown RBP13.79□□□□□ -0.2
RIMKLB-212ENST00000544257 SAFB2Q14151 953 aaKnown RBP eCLIP13.78□□□□□ -0.2
RIMKLB-212ENST00000544257 NHSL1Q5SYE7 1610 aa13.78□□□□□ -0.2
RIMKLB-212ENST00000544257 ANKARQ7Z5J8 1434 aa13.78□□□□□ -0.2
RIMKLB-212ENST00000544257 MS4A3Q96HJ5 214 aa13.77□□□□□ -0.21
RIMKLB-212ENST00000544257 CENPJQ9HC77 1338 aaPredicted RBP13.76□□□□□ -0.21
RIMKLB-212ENST00000544257 PHLPP1O60346 1717 aa13.76□□□□□ -0.21
RIMKLB-212ENST00000544257 FAM212AQ96EL1 285 aa13.76□□□□□ -0.21
RIMKLB-212ENST00000544257 QRICH2Q9H0J4 1663 aa13.75□□□□□ -0.21
RIMKLB-212ENST00000544257 TULP4Q9NRJ4 1543 aa13.75□□□□□ -0.21
RIMKLB-212ENST00000544257 COL16A1Q07092 1604 aaPredicted RBP13.75□□□□□ -0.21
RIMKLB-212ENST00000544257 MINK1Q8N4C8 1332 aaPredicted RBP13.75□□□□□ -0.21
RIMKLB-212ENST00000544257 KIF1AQ12756 1690 aa13.75□□□□□ -0.21
RIMKLB-212ENST00000544257 WASLO00401 505 aaPredicted RBP13.75□□□□□ -0.21
RIMKLB-212ENST00000544257 CARD11Q9BXL7 1154 aa13.75□□□□□ -0.21
RIMKLB-212ENST00000544257 KIF12Q96FN5 646 aa13.74□□□□□ -0.21
RIMKLB-212ENST00000544257 USP32Q8NFA0 1604 aa13.73□□□□□ -0.21
RIMKLB-212ENST00000544257 ORAI2Q96SN7 254 aa13.73□□□□□ -0.21
RIMKLB-212ENST00000544257 HIRIP3Q9BW71 556 aaPredicted RBP13.73□□□□□ -0.21
RIMKLB-212ENST00000544257 SBNO2Q9Y2G9 1366 aa13.73□□□□□ -0.21
RIMKLB-212ENST00000544257 ESCO1Q5FWF5 840 aa13.72□□□□□ -0.21
RIMKLB-212ENST00000544257 NPHP3Q7Z494 1330 aa13.71□□□□□ -0.21
RIMKLB-212ENST00000544257 ATP7BP35670 1465 aa13.71□□□□□ -0.21
RIMKLB-212ENST00000544257 ITSN1Q15811 1721 aa13.71□□□□□ -0.22
RIMKLB-212ENST00000544257 RGPD8O14715 1765 aaPredicted RBP13.71□□□□□ -0.22
RIMKLB-212ENST00000544257 SOS2Q07890 1332 aaPredicted RBP13.7□□□□□ -0.22
RIMKLB-212ENST00000544257 JCADQ9P266 1359 aa13.7□□□□□ -0.22
RIMKLB-212ENST00000544257 NUTM2FA1L443 756 aa13.7□□□□□ -0.22
RIMKLB-212ENST00000544257 MAP3K13O43283 966 aa13.7□□□□□ -0.22
RIMKLB-212ENST00000544257 DCAF8Q5TAQ9 597 aa13.69□□□□□ -0.22
RIMKLB-212ENST00000544257 CDK19Q9BWU1 502 aa13.69□□□□□ -0.22
RIMKLB-212ENST00000544257 PHF8Q9UPP1 1060 aa13.69□□□□□ -0.22
RIMKLB-212ENST00000544257 PXDNQ92626 1479 aa13.69□□□□□ -0.22
RIMKLB-212ENST00000544257 PRR36Q9H6K5 1346 aa13.69□□□□□ -0.22
RIMKLB-212ENST00000544257 SHPRHQ149N8 1683 aa13.69□□□□□ -0.22
RIMKLB-212ENST00000544257 TOPAZ1Q8N9V7 1692 aa13.69□□□□□ -0.22
RIMKLB-212ENST00000544257 LRRC59Q96AG4 307 aaKnown RBP13.68□□□□□ -0.22
RIMKLB-212ENST00000544257 EVC2Q86UK5 1308 aa13.68□□□□□ -0.22
RIMKLB-212ENST00000544257 SLC24A1O60721 1099 aa13.67□□□□□ -0.22
RIMKLB-212ENST00000544257 IFNLR1Q8IU57 520 aaPredicted RBP13.67□□□□□ -0.22
RIMKLB-212ENST00000544257 NUDT16Q96DE0 195 aaKnown RBP13.67□□□□□ -0.22
RIMKLB-212ENST00000544257 FOXO3O43524 673 aa13.66□□□□□ -0.22
RIMKLB-212ENST00000544257 DDX17Q92841 729 aaKnown RBP13.66□□□□□ -0.22
RIMKLB-212ENST00000544257 USP47Q96K76 1375 aa13.65□□□□□ -0.22
RIMKLB-212ENST00000544257 SRPK2P78362 688 aaKnown RBP13.65□□□□□ -0.22
RIMKLB-212ENST00000544257 SPATA31A6Q5VVP1 1343 aa13.65□□□□□ -0.22
RIMKLB-212ENST00000544257 PLEKHG3A1L390 1219 aa13.64□□□□□ -0.23
RIMKLB-212ENST00000544257 SBNO1A3KN83 1393 aa13.64□□□□□ -0.23
RIMKLB-212ENST00000544257 POLR3AO14802 1390 aaPredicted RBP13.64□□□□□ -0.23
RIMKLB-212ENST00000544257 MED1Q15648 1581 aaPredicted RBP13.64□□□□□ -0.23
RIMKLB-212ENST00000544257 PSME1Q06323 249 aa13.63□□□□□ -0.23
RIMKLB-212ENST00000544257 PUS7Q96PZ0 661 aaKnown RBP13.63□□□□□ -0.23
RIMKLB-212ENST00000544257 ATAD2Q6PL18 1390 aa13.63□□□□□ -0.23
RIMKLB-212ENST00000544257 PNPLA6Q8IY17 1366 aa13.63□□□□□ -0.23
RIMKLB-212ENST00000544257 COL22A1Q8NFW1 1626 aaPredicted RBP13.63□□□□□ -0.23
RIMKLB-212ENST00000544257 ST20-MTHFSA0A0A6YYL1 179 aa13.62□□□□□ -0.23
RIMKLB-212ENST00000544257 KRT28Q7Z3Y7 464 aa13.62□□□□□ -0.23
RIMKLB-212ENST00000544257 TESK2Q96S53 571 aa13.62□□□□□ -0.23
RIMKLB-212ENST00000544257 CABP2Q9NPB3 220 aa13.62□□□□□ -0.23
RIMKLB-212ENST00000544257 PPIP5K1Q6PFW1 1433 aa13.62□□□□□ -0.23
RIMKLB-212ENST00000544257 PMFBP1Q8TBY8 1022 aa13.62□□□□□ -0.23
RIMKLB-212ENST00000544257 TRPM3Q9HCF6 1732 aaPredicted RBP13.61□□□□□ -0.23
RIMKLB-212ENST00000544257 TNS3Q68CZ2 1445 aa13.61□□□□□ -0.23
RIMKLB-212ENST00000544257 SPATA31A3Q5VYP0 1347 aa13.61□□□□□ -0.23
RIMKLB-212ENST00000544257 NGDNQ8NEJ9 315 aaKnown RBP13.61□□□□□ -0.23
RIMKLB-212ENST00000544257 PCDHB13Q9Y5F0 798 aa13.61□□□□□ -0.23
RIMKLB-212ENST00000544257 SPOCK2Q92563 424 aa13.6□□□□□ -0.23
RIMKLB-212ENST00000544257 BRD4O60885 1362 aaPredicted RBP13.59□□□□□ -0.23
RIMKLB-212ENST00000544257 XPCQ01831 940 aaPredicted RBP13.59□□□□□ -0.23
RIMKLB-212ENST00000544257 LHX8Q68G74 356 aa13.59□□□□□ -0.23
RIMKLB-212ENST00000544257 ARHGEF10O15013 1369 aa13.59□□□□□ -0.23
RIMKLB-212ENST00000544257 ACEP12821 1306 aa13.59□□□□□ -0.23
RIMKLB-212ENST00000544257 GSE1Q14687 1217 aa13.58□□□□□ -0.23
RIMKLB-212ENST00000544257 SGIP1Q9BQI5 828 aa13.58□□□□□ -0.23
RIMKLB-212ENST00000544257 ASTLQ6HA08 431 aaPredicted RBP13.58□□□□□ -0.24
RIMKLB-212ENST00000544257 ALS2Q96Q42 1657 aa13.58□□□□□ -0.24
RIMKLB-212ENST00000544257 LRP6O75581 1613 aa13.57□□□□□ -0.24
RIMKLB-212ENST00000544257 NINLQ9Y2I6 1382 aa13.57□□□□□ -0.24
RIMKLB-212ENST00000544257 ATMINO43313 823 aaPredicted RBP13.57□□□□□ -0.24
RIMKLB-212ENST00000544257 PYGBP11216 843 aa13.57□□□□□ -0.24
RIMKLB-212ENST00000544257 TMF1P82094 1093 aa13.57□□□□□ -0.24
RIMKLB-212ENST00000544257 CABP1Q9NZU7 370 aa13.57□□□□□ -0.24
RIMKLB-212ENST00000544257 TRPC6Q9Y210 931 aa13.57□□□□□ -0.24
RIMKLB-212ENST00000544257 EIF4G2P78344 907 aaKnown RBP eCLIP13.56□□□□□ -0.24
RIMKLB-212ENST00000544257 CDCA8Q53HL2 280 aa13.55□□□□□ -0.24
RIMKLB-212ENST00000544257 AKAP12Q02952 1782 aa13.55□□□□□ -0.24
RIMKLB-212ENST00000544257 USP6P35125 1406 aa13.54□□□□□ -0.24
RIMKLB-212ENST00000544257 CPSF1Q10570 1443 aaKnown RBP13.54□□□□□ -0.24
RIMKLB-212ENST00000544257 PELP1Q8IZL8 1130 aaKnown RBP13.54□□□□□ -0.24
RIMKLB-212ENST00000544257 DISP3Q9P2K9 1392 aa13.54□□□□□ -0.24
RIMKLB-212ENST00000544257 SSH2Q76I76 1423 aa13.54□□□□□ -0.24
RIMKLB-212ENST00000544257 IFNL1Q8IU54 200 aa13.53□□□□□ -0.24
RIMKLB-212ENST00000544257 BMP2KQ9NSY1 1161 aaPredicted RBP13.53□□□□□ -0.24
RIMKLB-212ENST00000544257 MON2Q7Z3U7 1717 aa13.52□□□□□ -0.24
RIMKLB-212ENST00000544257 ABCA3Q99758 1704 aa13.52□□□□□ -0.24
RIMKLB-212ENST00000544257 NRKQ7Z2Y5 1582 aa13.52□□□□□ -0.25
RIMKLB-212ENST00000544257 CD163L1Q9NR16 1453 aa13.52□□□□□ -0.25
RIMKLB-212ENST00000544257 NUTM2BA6NNL0 878 aaPredicted RBP13.52□□□□□ -0.25
RIMKLB-212ENST00000544257 NUTM2EB1AL46 878 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms