RNA–Protein interactions for RNA: ENST00000544254.1

PSMD9-210, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

TSL 2

Gene PSMD9, Length 1,481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-210ENST00000544254 KCNA6P17658 529 aa17.03■□□□□ 0.32
PSMD9-210ENST00000544254 GOLGA2Q08379 1002 aa17.03■□□□□ 0.32
PSMD9-210ENST00000544254 COG3Q96JB2 828 aa17.03■□□□□ 0.32
PSMD9-210ENST00000544254 ACEP12821 1306 aa17.02■□□□□ 0.31
PSMD9-210ENST00000544254 USP6P35125 1406 aa17.02■□□□□ 0.31
PSMD9-210ENST00000544254 FMN2Q9NZ56 1722 aa17.01■□□□□ 0.31
PSMD9-210ENST00000544254 APAF1O14727 1248 aa17.01■□□□□ 0.31
PSMD9-210ENST00000544254 CCDC146Q8IYE0 955 aa17.01■□□□□ 0.31
PSMD9-210ENST00000544254 TTC21AQ8NDW8 1320 aa17.01■□□□□ 0.31
PSMD9-210ENST00000544254 RCAN3Q9UKA8 241 aa17■□□□□ 0.31
PSMD9-210ENST00000544254 NKTRP30414 1462 aaKnown RBP17■□□□□ 0.31
PSMD9-210ENST00000544254 IQSEC2Q5JU85 1478 aa17■□□□□ 0.31
PSMD9-210ENST00000544254 NWD1Q149M9 1564 aa17■□□□□ 0.31
PSMD9-210ENST00000544254 DIAPH1O60610 1272 aaKnown RBP16.99■□□□□ 0.31
PSMD9-210ENST00000544254 TTC21BQ7Z4L5 1316 aa16.99■□□□□ 0.31
PSMD9-210ENST00000544254 CDK12Q9NYV4 1490 aaPredicted RBP16.99■□□□□ 0.31
PSMD9-210ENST00000544254 SENP3-EIF4A1A0A087X0R7 540 aa16.99■□□□□ 0.31
PSMD9-210ENST00000544254 U2AF1L5P0DN76 240 aaPredicted RBP16.99■□□□□ 0.31
PSMD9-210ENST00000544254 U2AF1Q01081 240 aaKnown RBP eCLIP16.99■□□□□ 0.31
PSMD9-210ENST00000544254 CCDC27Q2M243 656 aa16.99■□□□□ 0.31
PSMD9-210ENST00000544254 E9PSI1 815 aa16.98■□□□□ 0.31
PSMD9-210ENST00000544254 NME9Q86XW9 330 aa16.98■□□□□ 0.31
PSMD9-210ENST00000544254 CDCA7LQ96GN5 454 aa16.98■□□□□ 0.31
PSMD9-210ENST00000544254 PPP4R2Q9NY27 417 aa16.98■□□□□ 0.31
PSMD9-210ENST00000544254 NCKAP5LQ9HCH0 1330 aa16.98■□□□□ 0.31
PSMD9-210ENST00000544254 SSH2Q76I76 1423 aa16.98■□□□□ 0.31
PSMD9-210ENST00000544254 ADGRL3Q9HAR2 1447 aa16.97■□□□□ 0.31
PSMD9-210ENST00000544254 POLKQ9UBT6 870 aa16.97■□□□□ 0.31
PSMD9-210ENST00000544254 SLFN5Q08AF3 891 aa16.96■□□□□ 0.31
PSMD9-210ENST00000544254 NALCNQ8IZF0 1738 aa16.96■□□□□ 0.31
PSMD9-210ENST00000544254 OVOS2A0A0J9YW53 1432 aa16.95■□□□□ 0.3
PSMD9-210ENST00000544254 OVOS2Q6IE36 1432 aa16.95■□□□□ 0.3
PSMD9-210ENST00000544254 TRMT2AQ8IZ69 625 aaKnown RBP16.95■□□□□ 0.3
PSMD9-210ENST00000544254 TCP11L2Q8N4U5 519 aa16.95■□□□□ 0.3
PSMD9-210ENST00000544254 NGDNQ8NEJ9 315 aaKnown RBP16.95■□□□□ 0.3
PSMD9-210ENST00000544254 RRP1P56182 461 aaKnown RBP16.94■□□□□ 0.3
PSMD9-210ENST00000544254 DUSP27Q5VZP5 1158 aa16.94■□□□□ 0.3
PSMD9-210ENST00000544254 WDR63Q8IWG1 891 aa16.94■□□□□ 0.3
PSMD9-210ENST00000544254 MAP2P11137 1827 aaKnown RBP16.94■□□□□ 0.3
PSMD9-210ENST00000544254 U2SURPO15042 1029 aaKnown RBP16.93■□□□□ 0.3
PSMD9-210ENST00000544254 WWC1Q8IX03 1113 aa16.93■□□□□ 0.3
PSMD9-210ENST00000544254 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
PSMD9-210ENST00000544254 LRRC7Q96NW7 1537 aa16.93■□□□□ 0.3
PSMD9-210ENST00000544254 USP31Q70CQ4 1352 aa16.93■□□□□ 0.3
PSMD9-210ENST00000544254 MAPK8IP3Q9UPT6 1336 aa16.93■□□□□ 0.3
PSMD9-210ENST00000544254 FCHSD2O94868 740 aa16.93■□□□□ 0.3
PSMD9-210ENST00000544254 NUTM2FA1L443 756 aa16.92■□□□□ 0.3
PSMD9-210ENST00000544254 NEFMP07197 916 aa16.92■□□□□ 0.3
PSMD9-210ENST00000544254 IRX6P78412 446 aaPredicted RBP16.92■□□□□ 0.3
PSMD9-210ENST00000544254 USP54Q70EL1 1684 aa16.91■□□□□ 0.3
PSMD9-210ENST00000544254 PLEKHF1Q96S99 279 aa16.91■□□□□ 0.3
PSMD9-210ENST00000544254 RGPD8O14715 1765 aaPredicted RBP16.91■□□□□ 0.3
PSMD9-210ENST00000544254 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.89■□□□□ 0.29
PSMD9-210ENST00000544254 PMFBP1Q8TBY8 1022 aa16.89■□□□□ 0.29
PSMD9-210ENST00000544254 NCOA3Q9Y6Q9 1424 aa16.88■□□□□ 0.29
PSMD9-210ENST00000544254 PPM1GO15355 546 aaPredicted RBP16.88■□□□□ 0.29
PSMD9-210ENST00000544254 ZRANB1Q9UGI0 708 aa16.88■□□□□ 0.29
PSMD9-210ENST00000544254 EMILIN1Q9Y6C2 1016 aa16.88■□□□□ 0.29
PSMD9-210ENST00000544254 PHF8Q9UPP1 1060 aa16.87■□□□□ 0.29
PSMD9-210ENST00000544254 IL13P35225 146 aa16.86■□□□□ 0.29
PSMD9-210ENST00000544254 MYH16Q9H6N6 1097 aa16.86■□□□□ 0.29
PSMD9-210ENST00000544254 KIF24Q5T7B8 1368 aa16.86■□□□□ 0.29
PSMD9-210ENST00000544254 IL16Q14005 1332 aa16.85■□□□□ 0.29
PSMD9-210ENST00000544254 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
PSMD9-210ENST00000544254 TMPOP42166 694 aaKnown RBP16.85■□□□□ 0.29
PSMD9-210ENST00000544254 C14orf37Q86TY3 774 aa16.85■□□□□ 0.29
PSMD9-210ENST00000544254 RSPH6AQ9H0K4 717 aa16.85■□□□□ 0.29
PSMD9-210ENST00000544254 NEUROD2Q15784 382 aa16.84■□□□□ 0.29
PSMD9-210ENST00000544254 PROSER2Q86WR7 435 aaPredicted RBP16.84■□□□□ 0.29
PSMD9-210ENST00000544254 RRS1Q15050 365 aaKnown RBP16.83■□□□□ 0.28
PSMD9-210ENST00000544254 RRP7AQ9Y3A4 280 aaKnown RBP16.83■□□□□ 0.28
PSMD9-210ENST00000544254 SBNO1A3KN83 1393 aa16.82■□□□□ 0.28
PSMD9-210ENST00000544254 DCCP43146 1447 aa16.82■□□□□ 0.28
PSMD9-210ENST00000544254 CT47B1P0C2W7 299 aaPredicted RBP16.82■□□□□ 0.28
PSMD9-210ENST00000544254 KIF1AQ12756 1690 aa16.82■□□□□ 0.28
PSMD9-210ENST00000544254 FLT4P35916 1363 aa16.82■□□□□ 0.28
PSMD9-210ENST00000544254 FBLN1P23142 703 aa16.81■□□□□ 0.28
PSMD9-210ENST00000544254 PRKAR2BP31323 418 aa16.81■□□□□ 0.28
PSMD9-210ENST00000544254 CALD1Q05682 793 aaKnown RBP16.81■□□□□ 0.28
PSMD9-210ENST00000544254 C19orf44Q9H6X5 657 aa16.81■□□□□ 0.28
PSMD9-210ENST00000544254 SPINK5Q9NQ38 1064 aaPredicted RBP16.81■□□□□ 0.28
PSMD9-210ENST00000544254 LMOD3Q0VAK6 560 aa16.8■□□□□ 0.28
PSMD9-210ENST00000544254 RIPK4P57078 832 aa16.8■□□□□ 0.28
PSMD9-210ENST00000544254 NLRP6P59044 892 aa16.8■□□□□ 0.28
PSMD9-210ENST00000544254 NFE2L2Q16236 605 aa16.79■□□□□ 0.28
PSMD9-210ENST00000544254 ESCO1Q5FWF5 840 aa16.79■□□□□ 0.28
PSMD9-210ENST00000544254 DMRT2Q9Y5R5 561 aa16.79■□□□□ 0.28
PSMD9-210ENST00000544254 PEAK1Q9H792 1746 aa16.78■□□□□ 0.28
PSMD9-210ENST00000544254 EIF4A2Q14240 407 aaKnown RBP16.78■□□□□ 0.28
PSMD9-210ENST00000544254 ABTB2Q8N961 1025 aa16.78■□□□□ 0.28
PSMD9-210ENST00000544254 CCDC136Q96JN2 1154 aa16.78■□□□□ 0.28
PSMD9-210ENST00000544254 TRIM35Q9UPQ4 493 aa16.78■□□□□ 0.28
PSMD9-210ENST00000544254 RTL1A6NKG5 1358 aa16.78■□□□□ 0.28
PSMD9-210ENST00000544254 ARHGEF10O15013 1369 aa16.78■□□□□ 0.28
PSMD9-210ENST00000544254 PSME1Q06323 249 aa16.77■□□□□ 0.28
PSMD9-210ENST00000544254 MAP3K19Q56UN5 1328 aa16.77■□□□□ 0.27
PSMD9-210ENST00000544254 RGPD1P0DJD0 1748 aa16.77■□□□□ 0.27
PSMD9-210ENST00000544254 MARF1Q9Y4F3 1742 aaKnown RBP16.77■□□□□ 0.27
PSMD9-210ENST00000544254 LMTK3Q96Q04 1460 aa16.76■□□□□ 0.27
PSMD9-210ENST00000544254 PAK3O75914 559 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms