RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 B4GALNT3Q6L9W6 998 aa18.09■□□□□ 0.49
HCFC2-202ENST00000544223 TCP11L2Q8N4U5 519 aa18.08■□□□□ 0.49
HCFC2-202ENST00000544223 RCAN3Q9UKA8 241 aa18.08■□□□□ 0.49
HCFC2-202ENST00000544223 CDC42BPGQ6DT37 1551 aa18.08■□□□□ 0.48
HCFC2-202ENST00000544223 MAP2P11137 1827 aaKnown RBP18.08■□□□□ 0.48
HCFC2-202ENST00000544223 ZNF521Q96K83 1311 aa18.07■□□□□ 0.48
HCFC2-202ENST00000544223 EDC4Q6P2E9 1401 aaKnown RBP18.06■□□□□ 0.48
HCFC2-202ENST00000544223 ANKRD26Q9UPS8 1709 aa18.06■□□□□ 0.48
HCFC2-202ENST00000544223 ZNF142P52746 1687 aaPredicted RBP18.06■□□□□ 0.48
HCFC2-202ENST00000544223 NGDNQ8NEJ9 315 aaKnown RBP18.06■□□□□ 0.48
HCFC2-202ENST00000544223 XRN1Q8IZH2 1706 aaKnown RBP18.06■□□□□ 0.48
HCFC2-202ENST00000544223 DIP2AQ14689 1571 aa18.06■□□□□ 0.48
HCFC2-202ENST00000544223 ITSN1Q15811 1721 aa18.05■□□□□ 0.48
HCFC2-202ENST00000544223 GOLGA2Q08379 1002 aa18.05■□□□□ 0.48
HCFC2-202ENST00000544223 HMOX1P09601 288 aa18.05■□□□□ 0.48
HCFC2-202ENST00000544223 DUSP27Q5VZP5 1158 aa18.05■□□□□ 0.48
HCFC2-202ENST00000544223 PTCH1Q13635 1447 aa18.04■□□□□ 0.48
HCFC2-202ENST00000544223 C14orf37Q86TY3 774 aa18.04■□□□□ 0.48
HCFC2-202ENST00000544223 COG3Q96JB2 828 aa18.04■□□□□ 0.48
HCFC2-202ENST00000544223 TTC21BQ7Z4L5 1316 aa18.04■□□□□ 0.48
HCFC2-202ENST00000544223 PDE3BQ13370 1112 aa18.03■□□□□ 0.48
HCFC2-202ENST00000544223 WWC1Q8IX03 1113 aa18.03■□□□□ 0.48
HCFC2-202ENST00000544223 RUNDC1Q96C34 613 aa18.03■□□□□ 0.48
HCFC2-202ENST00000544223 ADGRB2O60241 1585 aa18.03■□□□□ 0.48
HCFC2-202ENST00000544223 MON2Q7Z3U7 1717 aa18.03■□□□□ 0.48
HCFC2-202ENST00000544223 AKAP12Q02952 1782 aa18.03■□□□□ 0.48
HCFC2-202ENST00000544223 COL3A1P02461 1466 aaPredicted RBP18.03■□□□□ 0.48
HCFC2-202ENST00000544223 DIAPH1O60610 1272 aaKnown RBP18.02■□□□□ 0.48
HCFC2-202ENST00000544223 PELP1Q8IZL8 1130 aaKnown RBP18.02■□□□□ 0.48
HCFC2-202ENST00000544223 INSRP06213 1382 aa18.02■□□□□ 0.47
HCFC2-202ENST00000544223 NPHP4O75161 1426 aaPredicted RBP18.01■□□□□ 0.47
HCFC2-202ENST00000544223 CHD2O14647 1828 aaKnown RBP18.01■□□□□ 0.47
HCFC2-202ENST00000544223 PLEKHG3A1L390 1219 aa18.01■□□□□ 0.47
HCFC2-202ENST00000544223 SLFN5Q08AF3 891 aa18.01■□□□□ 0.47
HCFC2-202ENST00000544223 TOPAZ1Q8N9V7 1692 aa18.01■□□□□ 0.47
HCFC2-202ENST00000544223 PAK3O75914 559 aaPredicted RBP18.01■□□□□ 0.47
HCFC2-202ENST00000544223 RRP1P56182 461 aaKnown RBP18.01■□□□□ 0.47
HCFC2-202ENST00000544223 XPCQ01831 940 aaPredicted RBP18.01■□□□□ 0.47
HCFC2-202ENST00000544223 ZNF692Q9BU19 519 aaPredicted RBP18■□□□□ 0.47
HCFC2-202ENST00000544223 C20orf194Q5TEA3 1177 aa18■□□□□ 0.47
HCFC2-202ENST00000544223 USP6P35125 1406 aa18■□□□□ 0.47
HCFC2-202ENST00000544223 NALCNQ8IZF0 1738 aa17.99■□□□□ 0.47
HCFC2-202ENST00000544223 RNF123Q5XPI4 1314 aa17.99■□□□□ 0.47
HCFC2-202ENST00000544223 EXOC6Q8TAG9 804 aa17.98■□□□□ 0.47
HCFC2-202ENST00000544223 PLEKHF1Q96S99 279 aa17.98■□□□□ 0.47
HCFC2-202ENST00000544223 KDM4FA0A1W2PPD8 638 aa17.97■□□□□ 0.47
HCFC2-202ENST00000544223 ESCO1Q5FWF5 840 aa17.97■□□□□ 0.47
HCFC2-202ENST00000544223 PHACTR3Q96KR7 559 aa17.97■□□□□ 0.47
HCFC2-202ENST00000544223 ORAI2Q96SN7 254 aa17.96■□□□□ 0.47
HCFC2-202ENST00000544223 BCAR3O75815 825 aa17.96■□□□□ 0.47
HCFC2-202ENST00000544223 PRKAR2BP31323 418 aa17.96■□□□□ 0.47
HCFC2-202ENST00000544223 HSP90AB2PQ58FF8 381 aa17.96■□□□□ 0.47
HCFC2-202ENST00000544223 IQSEC2Q5JU85 1478 aa17.95■□□□□ 0.46
HCFC2-202ENST00000544223 PNPLA6Q8IY17 1366 aa17.95■□□□□ 0.46
HCFC2-202ENST00000544223 PPP4R2Q9NY27 417 aa17.95■□□□□ 0.46
HCFC2-202ENST00000544223 NRKQ7Z2Y5 1582 aa17.95■□□□□ 0.46
HCFC2-202ENST00000544223 PROSER2Q86WR7 435 aaPredicted RBP17.94■□□□□ 0.46
HCFC2-202ENST00000544223 TSR2Q969E8 191 aaKnown RBP17.94■□□□□ 0.46
HCFC2-202ENST00000544223 AEBP1Q8IUX7 1158 aa17.94■□□□□ 0.46
HCFC2-202ENST00000544223 PIK3R4Q99570 1358 aa17.93■□□□□ 0.46
HCFC2-202ENST00000544223 NLRP6P59044 892 aa17.93■□□□□ 0.46
HCFC2-202ENST00000544223 THUMPD2Q9BTF0 503 aaKnown RBP17.93■□□□□ 0.46
HCFC2-202ENST00000544223 IL13P35225 146 aa17.93■□□□□ 0.46
HCFC2-202ENST00000544223 TMPOP42166 694 aaKnown RBP17.93■□□□□ 0.46
HCFC2-202ENST00000544223 TRMT2AQ8IZ69 625 aaKnown RBP17.93■□□□□ 0.46
HCFC2-202ENST00000544223 MAPK8IP3Q9UPT6 1336 aa17.92■□□□□ 0.46
HCFC2-202ENST00000544223 DDX17Q92841 729 aaKnown RBP17.92■□□□□ 0.46
HCFC2-202ENST00000544223 BCL2L13Q9BXK5 485 aa17.92■□□□□ 0.46
HCFC2-202ENST00000544223 TRIM35Q9UPQ4 493 aa17.92■□□□□ 0.46
HCFC2-202ENST00000544223 FMN2Q9NZ56 1722 aa17.91■□□□□ 0.46
HCFC2-202ENST00000544223 SSH2Q76I76 1423 aa17.91■□□□□ 0.46
HCFC2-202ENST00000544223 FOXO3O43524 673 aa17.91■□□□□ 0.46
HCFC2-202ENST00000544223 RIPK4P57078 832 aa17.91■□□□□ 0.46
HCFC2-202ENST00000544223 ABTB2Q8N961 1025 aa17.91■□□□□ 0.46
HCFC2-202ENST00000544223 RSPH6AQ9H0K4 717 aa17.91■□□□□ 0.46
HCFC2-202ENST00000544223 PHF8Q9UPP1 1060 aa17.91■□□□□ 0.46
HCFC2-202ENST00000544223 LRRC7Q96NW7 1537 aa17.91■□□□□ 0.46
HCFC2-202ENST00000544223 E9PSI1 815 aa17.91■□□□□ 0.46
HCFC2-202ENST00000544223 ZBTB7CA1YPR0 619 aa17.9■□□□□ 0.46
HCFC2-202ENST00000544223 OVOS2A0A0J9YW53 1432 aa17.9■□□□□ 0.46
HCFC2-202ENST00000544223 OVOS2Q6IE36 1432 aa17.9■□□□□ 0.46
HCFC2-202ENST00000544223 EIF4A2Q14240 407 aaKnown RBP17.9■□□□□ 0.46
HCFC2-202ENST00000544223 MAP3K19Q56UN5 1328 aa17.89■□□□□ 0.45
HCFC2-202ENST00000544223 CRBNQ96SW2 442 aa17.89■□□□□ 0.45
HCFC2-202ENST00000544223 LMOD2Q6P5Q4 547 aa17.89■□□□□ 0.45
HCFC2-202ENST00000544223 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.45
HCFC2-202ENST00000544223 PEAK1Q9H792 1746 aa17.88■□□□□ 0.45
HCFC2-202ENST00000544223 PIK3C2AO00443 1686 aa17.88■□□□□ 0.45
HCFC2-202ENST00000544223 LAS1LQ9Y4W2 734 aaKnown RBP17.88■□□□□ 0.45
HCFC2-202ENST00000544223 CCDC136Q96JN2 1154 aa17.87■□□□□ 0.45
HCFC2-202ENST00000544223 AATKQ6ZMQ8 1374 aa17.87■□□□□ 0.45
HCFC2-202ENST00000544223 FAM83GA6ND36 823 aa17.87■□□□□ 0.45
HCFC2-202ENST00000544223 PSME1Q06323 249 aa17.87■□□□□ 0.45
HCFC2-202ENST00000544223 LTV1Q96GA3 475 aaPredicted RBP17.87■□□□□ 0.45
HCFC2-202ENST00000544223 ADGRL3Q9HAR2 1447 aa17.86■□□□□ 0.45
HCFC2-202ENST00000544223 DCTN1Q14203 1278 aa17.86■□□□□ 0.45
HCFC2-202ENST00000544223 SULT6B1Q6IMI4 303 aa17.86■□□□□ 0.45
HCFC2-202ENST00000544223 STRCP1A6NGW2 1772 aa17.86■□□□□ 0.45
HCFC2-202ENST00000544223 CDK12Q9NYV4 1490 aaPredicted RBP17.85■□□□□ 0.45
HCFC2-202ENST00000544223 FCHSD2O94868 740 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms