RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 A0A1W2PP64 1363 aa13.94□□□□□ -0.18
VEGFB-204ENST00000543462 SPATA31A6Q5VVP1 1343 aa13.93□□□□□ -0.18
VEGFB-204ENST00000543462 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.93□□□□□ -0.18
VEGFB-204ENST00000543462 ANKRD26Q9UPS8 1709 aa13.93□□□□□ -0.18
VEGFB-204ENST00000543462 TMF1P82094 1093 aa13.93□□□□□ -0.18
VEGFB-204ENST00000543462 CABP1Q9NZU7 370 aa13.93□□□□□ -0.18
VEGFB-204ENST00000543462 PLCH1Q4KWH8 1693 aa13.93□□□□□ -0.18
VEGFB-204ENST00000543462 ARHGEF10O15013 1369 aa13.93□□□□□ -0.18
VEGFB-204ENST00000543462 ANKRD36BQ8N2N9 1353 aa13.92□□□□□ -0.18
VEGFB-204ENST00000543462 NRAPQ86VF7 1730 aa13.92□□□□□ -0.18
VEGFB-204ENST00000543462 EDC4Q6P2E9 1401 aaKnown RBP13.91□□□□□ -0.18
VEGFB-204ENST00000543462 NWD2Q9ULI1 1742 aa13.91□□□□□ -0.18
VEGFB-204ENST00000543462 C11orf95C9JLR9 678 aaPredicted RBP13.91□□□□□ -0.18
VEGFB-204ENST00000543462 NGDNQ8NEJ9 315 aaKnown RBP13.91□□□□□ -0.18
VEGFB-204ENST00000543462 LMO7Q8WWI1 1683 aa13.9□□□□□ -0.18
VEGFB-204ENST00000543462 NFAT5O94916 1531 aa13.9□□□□□ -0.19
VEGFB-204ENST00000543462 USP19O94966 1318 aa13.9□□□□□ -0.19
VEGFB-204ENST00000543462 PSME1Q06323 249 aa13.89□□□□□ -0.19
VEGFB-204ENST00000543462 SLC12A5Q9H2X9 1139 aa13.89□□□□□ -0.19
VEGFB-204ENST00000543462 COL18A1P39060 1754 aa13.88□□□□□ -0.19
VEGFB-204ENST00000543462 KTN1Q86UP2 1357 aaKnown RBP13.88□□□□□ -0.19
VEGFB-204ENST00000543462 CDCA8Q53HL2 280 aa13.88□□□□□ -0.19
VEGFB-204ENST00000543462 COL14A1Q05707 1796 aaKnown RBP13.88□□□□□ -0.19
VEGFB-204ENST00000543462 OVOS2A0A0J9YW53 1432 aa13.88□□□□□ -0.19
VEGFB-204ENST00000543462 OVOS2Q6IE36 1432 aa13.88□□□□□ -0.19
VEGFB-204ENST00000543462 LTN1O94822 1766 aa13.87□□□□□ -0.19
VEGFB-204ENST00000543462 KIF7Q2M1P5 1343 aa13.87□□□□□ -0.19
VEGFB-204ENST00000543462 TTC21BQ7Z4L5 1316 aa13.87□□□□□ -0.19
VEGFB-204ENST00000543462 USP31Q70CQ4 1352 aa13.86□□□□□ -0.19
VEGFB-204ENST00000543462 ZNF692Q9BU19 519 aaPredicted RBP13.86□□□□□ -0.19
VEGFB-204ENST00000543462 TTC21AQ8NDW8 1320 aa13.86□□□□□ -0.19
VEGFB-204ENST00000543462 CCDC7Q96M83 1385 aa13.85□□□□□ -0.19
VEGFB-204ENST00000543462 SLIT2O94813 1529 aa13.85□□□□□ -0.19
VEGFB-204ENST00000543462 ABCC6O95255 1503 aa13.85□□□□□ -0.19
VEGFB-204ENST00000543462 ZEB1P37275 1124 aaPredicted RBP13.84□□□□□ -0.19
VEGFB-204ENST00000543462 RGPD5Q99666 1765 aa13.83□□□□□ -0.19
VEGFB-204ENST00000543462 TERF2IPQ9NYB0 399 aa13.83□□□□□ -0.2
VEGFB-204ENST00000543462 WASHC2AQ641Q2 1341 aa13.83□□□□□ -0.2
VEGFB-204ENST00000543462 TMC1Q8TDI8 760 aa13.82□□□□□ -0.2
VEGFB-204ENST00000543462 CPDO75976 1380 aa13.82□□□□□ -0.2
VEGFB-204ENST00000543462 NSD3Q9BZ95 1437 aa13.81□□□□□ -0.2
VEGFB-204ENST00000543462 HDGFL2Q7Z4V5 671 aaPredicted RBP13.81□□□□□ -0.2
VEGFB-204ENST00000543462 CARD14Q9BXL6 1004 aa13.81□□□□□ -0.2
VEGFB-204ENST00000543462 RGS17Q9UGC6 210 aaPredicted RBP13.81□□□□□ -0.2
VEGFB-204ENST00000543462 BCL9LQ86UU0 1499 aa13.8□□□□□ -0.2
VEGFB-204ENST00000543462 CABLES1Q8TDN4 633 aa13.8□□□□□ -0.2
VEGFB-204ENST00000543462 WNK3Q9BYP7 1800 aa13.8□□□□□ -0.2
VEGFB-204ENST00000543462 PAK3O75914 559 aaPredicted RBP13.79□□□□□ -0.2
VEGFB-204ENST00000543462 PEAK1Q9H792 1746 aa13.78□□□□□ -0.2
VEGFB-204ENST00000543462 NME9Q86XW9 330 aa13.78□□□□□ -0.2
VEGFB-204ENST00000543462 ABTB2Q8N961 1025 aa13.78□□□□□ -0.2
VEGFB-204ENST00000543462 CAMTA1Q9Y6Y1 1673 aa13.78□□□□□ -0.2
VEGFB-204ENST00000543462 NUTM2BA6NNL0 878 aaPredicted RBP13.77□□□□□ -0.21
VEGFB-204ENST00000543462 NUTM2EB1AL46 878 aaPredicted RBP13.77□□□□□ -0.21
VEGFB-204ENST00000543462 GLI3P10071 1580 aa13.77□□□□□ -0.21
VEGFB-204ENST00000543462 MAP2P11137 1827 aaKnown RBP13.77□□□□□ -0.21
VEGFB-204ENST00000543462 NUTM2AQ8IVF1 878 aaPredicted RBP13.77□□□□□ -0.21
VEGFB-204ENST00000543462 FNBP4Q8N3X1 1017 aaPredicted RBP13.77□□□□□ -0.21
VEGFB-204ENST00000543462 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.21
VEGFB-204ENST00000543462 FAM208AQ9UK61 1670 aaKnown RBP13.76□□□□□ -0.21
VEGFB-204ENST00000543462 ATRNO75882 1429 aa13.76□□□□□ -0.21
VEGFB-204ENST00000543462 KIAA0232Q92628 1395 aa13.76□□□□□ -0.21
VEGFB-204ENST00000543462 NUTM2GQ5VZR2 741 aa13.76□□□□□ -0.21
VEGFB-204ENST00000543462 LMOD2Q6P5Q4 547 aa13.76□□□□□ -0.21
VEGFB-204ENST00000543462 NLRP13Q86W25 1043 aa13.76□□□□□ -0.21
VEGFB-204ENST00000543462 ADAMTS2O95450 1211 aa13.75□□□□□ -0.21
VEGFB-204ENST00000543462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.75□□□□□ -0.21
VEGFB-204ENST00000543462 AFF2P51816 1311 aa13.74□□□□□ -0.21
VEGFB-204ENST00000543462 FYB1O15117 783 aa13.74□□□□□ -0.21
VEGFB-204ENST00000543462 GCP02774 474 aa13.74□□□□□ -0.21
VEGFB-204ENST00000543462 NLRP6P59044 892 aa13.74□□□□□ -0.21
VEGFB-204ENST00000543462 COL5A2P05997 1499 aaPredicted RBP13.74□□□□□ -0.21
VEGFB-204ENST00000543462 NSD2O96028 1365 aa13.73□□□□□ -0.21
VEGFB-204ENST00000543462 THSD7AQ9UPZ6 1657 aa13.73□□□□□ -0.21
VEGFB-204ENST00000543462 FAM83GA6ND36 823 aa13.73□□□□□ -0.21
VEGFB-204ENST00000543462 PER1O15534 1290 aaPredicted RBP13.73□□□□□ -0.21
VEGFB-204ENST00000543462 PANK3Q9H999 370 aa13.73□□□□□ -0.21
VEGFB-204ENST00000543462 AATKQ6ZMQ8 1374 aa13.72□□□□□ -0.21
VEGFB-204ENST00000543462 NPC1L1Q9UHC9 1359 aa13.72□□□□□ -0.21
VEGFB-204ENST00000543462 C8orf37Q96NL8 207 aa13.72□□□□□ -0.21
VEGFB-204ENST00000543462 RGPD2P0DJD1 1756 aa13.72□□□□□ -0.21
VEGFB-204ENST00000543462 CDK12Q9NYV4 1490 aaPredicted RBP13.72□□□□□ -0.21
VEGFB-204ENST00000543462 SMG6Q86US8 1419 aaKnown RBP13.72□□□□□ -0.21
VEGFB-204ENST00000543462 ARHGEF25Q86VW2 580 aa13.71□□□□□ -0.21
VEGFB-204ENST00000543462 BRWD3Q6RI45 1802 aa13.71□□□□□ -0.22
VEGFB-204ENST00000543462 CGNL1Q0VF96 1302 aa13.7□□□□□ -0.22
VEGFB-204ENST00000543462 AMER1Q5JTC6 1135 aaPredicted RBP13.7□□□□□ -0.22
VEGFB-204ENST00000543462 MEX3CQ5U5Q3 659 aaKnown RBP13.7□□□□□ -0.22
VEGFB-204ENST00000543462 POTEAQ6S8J7 498 aa13.7□□□□□ -0.22
VEGFB-204ENST00000543462 KCNH5Q8NCM2 988 aa13.7□□□□□ -0.22
VEGFB-204ENST00000543462 POLR3GLQ9BT43 218 aa13.7□□□□□ -0.22
VEGFB-204ENST00000543462 GGNBP2Q9H3C7 697 aa13.69□□□□□ -0.22
VEGFB-204ENST00000543462 PARP4Q9UKK3 1724 aaKnown RBP13.69□□□□□ -0.22
VEGFB-204ENST00000543462 RTL1A6NKG5 1358 aa13.69□□□□□ -0.22
VEGFB-204ENST00000543462 ZC3H6P61129 1189 aaKnown RBP13.68□□□□□ -0.22
VEGFB-204ENST00000543462 ZNF772Q68DY9 489 aaPredicted RBP13.68□□□□□ -0.22
VEGFB-204ENST00000543462 NGLY1Q96IV0 654 aa13.68□□□□□ -0.22
VEGFB-204ENST00000543462 PRDM11Q9NQV5 511 aa13.68□□□□□ -0.22
VEGFB-204ENST00000543462 BLMP54132 1417 aaPredicted RBP13.67□□□□□ -0.22
VEGFB-204ENST00000543462 PLEKHG5O94827 1062 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms